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CmoCh06G004860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G004860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr06:2342169..2342525
RNA-Seq ExpressionCmoCh06G004860
SyntenyCmoCh06G004860
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043872.1 auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa]5.0e-4173.11Show/hide
Query:  MLKKRIPSLKKLVK-TNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILN
        MLK R+PSLKKL K + + RP   +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT+FLCHPLF+MVLDK Y EFGF+Q++GLVV C+VFAFQEILN
Subjt:  MLKKRIPSLKKLVK-TNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILN

Query:  TIEANRGSFHFGEHVHEFV
        TIEAN GSFHFGE VHEF+
Subjt:  TIEANRGSFHFGEHVHEFV

KAG6596577.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5997.46Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNT
        MLKKRIPSLKKLVKTNK RPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQR+GLV+PCNVFAFQEILNT
Subjt:  MLKKRIPSLKKLVKTNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNT

Query:  IEANRGSFHFGEHVHEFV
        IEANRGSFHFGEHVHEFV
Subjt:  IEANRGSFHFGEHVHEFV

PNY10917.1 SAUR family protein [Trifolium pratense]1.4e-2755.2Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFA
        ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R VVPT +L HPLFKM+L+K+YNEFGF+QRNGLVVPC+V  
Subjt:  MLKKRIPSLKKLVKTNKIRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFA

Query:  FQEILNTIEANRGSFHFGEHVHEFV
        FQE++N IE N G FH G+  H+FV
Subjt:  FQEILNTIEANRGSFHFGEHVHEFV

XP_002282286.1 PREDICTED: auxin-induced protein 15A [Vitis vinifera]4.1e-2755.56Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF
        ML K++ S+KKLVK  K+  G        +C+L       S   TTP G   +YVGEE +RFVVPT FL HPLFKM+L+KAYNEFGFDQRNGLVVPC+V 
Subjt:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF

Query:  AFQEILNTIEANRGSFHFGEHVHEFV
         FQE++N +E   G F FG  V EFV
Subjt:  AFQEILNTIEANRGSFHFGEHVHEFV

XP_015898653.1 auxin-induced protein 15A [Ziziphus jujuba]5.3e-2753.97Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF
        ML K++ S KKL K  K   G        +C+L      S    TTP G + +YVGEE +RFVVPT FL HPLFKM+L+KAYNEFGF+QRNGLVVPC+V 
Subjt:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF

Query:  AFQEILNTIEANRGSFHFGEHVHEFV
         FQE++N +E + G F FG+ V EFV
Subjt:  AFQEILNTIEANRGSFHFGEHVHEFV

TrEMBL top hitse value%identityAlignment
A0A0A0LAX7 Uncharacterized protein2.0e-4072.5Show/hide
Query:  MLKKRIPSLKKLVKTN--KIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEIL
        MLK R+PSLKK+ K N  + R    +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT+FLCHPLFKMVLDK Y EFGF+Q++GLVV C+VFAFQEIL
Subjt:  MLKKRIPSLKKLVKTN--KIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEIL

Query:  NTIEANRGSFHFGEHVHEFV
        NTIEAN GSFHFGE VHEF+
Subjt:  NTIEANRGSFHFGEHVHEFV

A0A2K3P6J9 SAUR family protein6.8e-2855.2Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFA
        ML K++ SLKKL K  K   G       +C+L       S  NTTP G   LYVGEE++R VVPT +L HPLFKM+L+K+YNEFGF+QRNGLVVPC+V  
Subjt:  MLKKRIPSLKKLVKTNKIRPG-------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFA

Query:  FQEILNTIEANRGSFHFGEHVHEFV
        FQE++N IE N G FH G+  H+FV
Subjt:  FQEILNTIEANRGSFHFGEHVHEFV

A0A438JSC1 Auxin-responsive protein SAUR502.0e-2755.56Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF
        ML K++ S+KKLVK  K+  G        +C+L       S   TTP G   +YVGEE +RFVVPT FL HPLFKM+L+KAYNEFGFDQRNGLVVPC+V 
Subjt:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF

Query:  AFQEILNTIEANRGSFHFGEHVHEFV
         FQE++N +E   G F FG  V EFV
Subjt:  AFQEILNTIEANRGSFHFGEHVHEFV

A0A5A7TKN6 Auxin-responsive protein SAUR15-like2.4e-4173.11Show/hide
Query:  MLKKRIPSLKKLVK-TNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILN
        MLK R+PSLKKL K + + RP   +LAS+M A  GR  TPRGCV LYVGEE RRFVVPT+FLCHPLF+MVLDK Y EFGF+Q++GLVV C+VFAFQEILN
Subjt:  MLKKRIPSLKKLVK-TNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILN

Query:  TIEANRGSFHFGEHVHEFV
        TIEAN GSFHFGE VHEF+
Subjt:  TIEANRGSFHFGEHVHEFV

D7TJ88 Uncharacterized protein2.0e-2755.56Show/hide
Query:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF
        ML K++ S+KKLVK  K+  G        +C+L       S   TTP G   +YVGEE +RFVVPT FL HPLFKM+L+KAYNEFGFDQRNGLVVPC+V 
Subjt:  MLKKRIPSLKKLVKTNKIRPG--------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVF

Query:  AFQEILNTIEANRGSFHFGEHVHEFV
         FQE++N +E   G F FG  V EFV
Subjt:  AFQEILNTIEANRGSFHFGEHVHEFV

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.8e-1044.44Show/hide
Query:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI
        P+G   +YVGE   R++VP  FL HP F+ +L +A  EFGFD   GL +PC+   FQ + + I
Subjt:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI

P32295 Indole-3-acetic acid-induced protein ARG74.7e-1040Show/hide
Query:  LASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQ-RNGLVVPCNVFAFQEILNTIEA
        L+++  ASS     P+G + +YVGE  +RFV+P   L  PLF+ +L +A  EFG+D    GL +PC+   FQ I + + A
Subjt:  LASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQ-RNGLVVPCNVFAFQEILNTIEA

Q9LTV3 Auxin-responsive protein SAUR728.0e-1033.68Show/hide
Query:  LVKTNKIRPGK---CILASKMAASSGRNTT--PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI
        L++++  RP +     L S +   S + T+  P G V +YVG+E  RFVV  + L HP+F  +L+++  E+G++Q+  L +PC+V  F+ I+ ++
Subjt:  LVKTNKIRPGK---CILASKMAASSGRNTT--PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI

Q9SA49 Auxin-responsive protein SAUR411.6e-1040.91Show/hide
Query:  NTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI
        NT P G V +YVGEE  RFVV  + + HP+F  +L+++  E+G+ Q+  L +PC+V  F+ ++ T+
Subjt:  NTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI

Q9ZUZ3 Auxin-responsive protein SAUR321.5e-1137.5Show/hide
Query:  PRGCVVLYV---GEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFHFGEHVH
        P+GC+ + V   GEE +RF+VP  +  HPLF  +L +A +E+GFDQ+  + +PC+V  F+ +   I+  R  ++   H H
Subjt:  PRGCVVLYV---GEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFHFGEHVH

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family5.7e-1940.74Show/hide
Query:  MLKKRIPSLKKLVKTNK-----IRPG-----------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEF-GFDQRN
        ML KRI S K L K  K      R G             ++     A+   + TP G   +YVGEE  + VVPT +L HPLF+M+LDK+++EF  F+Q+ 
Subjt:  MLKKRIPSLKKLVKTNK-----IRPG-----------KCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEF-GFDQRN

Query:  GLVVPCNVFAFQEILNTIEANRGSFHFGEHVHEFV
         LVVPC++  FQ+++N +E+  G+F FGE V EF+
Subjt:  GLVVPCNVFAFQEILNTIEANRGSFHFGEHVHEFV

AT3G43120.1 SAUR-like auxin-responsive protein family6.5e-1550Show/hide
Query:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIE
        P+G + +YVG E RRF++PT FL H LFK++L+KA  E+GFD    L +PC V  F+ +L  IE
Subjt:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIE

AT5G20810.1 SAUR-like auxin-responsive protein family4.5e-1647.89Show/hide
Query:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFH
        P+G + +YVG E RRF++PT +L H LFK++L+KA  EFGFDQ   L +PC V  F+ +L  +E N    H
Subjt:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFH

AT5G20810.2 SAUR-like auxin-responsive protein family4.5e-1647.89Show/hide
Query:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFH
        P+G + +YVG E RRF++PT +L H LFK++L+KA  EFGFDQ   L +PC V  F+ +L  +E N    H
Subjt:  PRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFH

AT5G66260.1 SAUR-like auxin-responsive protein family4.7e-1340.26Show/hide
Query:  LASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI
        L  K +     N  P+G  V+YVG    R V+P  FL HP+F+M+L ++  EFGF Q NGL +PC+   F+ ++++I
Subjt:  LASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGATTCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACAC
GACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGAAGATTTGTGGTACCGACTAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCT
ACAACGAGTTTGGGTTCGATCAAAGAAATGGTCTCGTGGTTCCTTGCAATGTTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTT
GGGGAACATGTTCATGAGTTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGAAAAGGATACCGAGTTTGAAGAAATTGGTTAAGACGAACAAGATTCGACCCGGAAAATGTATACTAGCATCAAAGATGGCAGCAAGTAGTGGTCGGAACAC
GACGCCGAGAGGGTGTGTGGTTTTGTATGTCGGAGAAGAATATCGAAGATTTGTGGTACCGACTAAGTTTCTTTGTCATCCACTCTTCAAGATGGTGTTGGATAAAGCCT
ACAACGAGTTTGGGTTCGATCAAAGAAATGGTCTCGTGGTTCCTTGCAATGTTTTTGCTTTTCAAGAGATTTTGAATACTATTGAAGCTAATCGCGGTAGCTTTCACTTT
GGGGAACATGTTCATGAGTTCGTTTGA
Protein sequenceShow/hide protein sequence
MLKKRIPSLKKLVKTNKIRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTKFLCHPLFKMVLDKAYNEFGFDQRNGLVVPCNVFAFQEILNTIEANRGSFHF
GEHVHEFV