; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEarly nodulin-20-like
Genome locationCmo_Chr06:2449598..2450095
RNA-Seq ExpressionCmoCh06G005090
SyntenyCmoCh06G005090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028138.1 hypothetical protein SDJN02_09318, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-5980.12Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVV+ ++LN                PP            HSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGF
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGF
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGF

XP_011652026.1 uncharacterized protein LOC105434978 [Cucumis sativus]9.6e-5979.41Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF
        MDD SA KP  P  NLRRRNSI VPV VPSKLNL   AATKSS G+ ASP  PLAFEL PIKSSS     SL YTSL+DILPSPT+ SSPTA SAANSG+
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV
        EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV

XP_022957964.1 uncharacterized protein LOC111459312 [Cucurbita moschata]2.5e-83100Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

XP_023005655.1 uncharacterized protein LOC111498593 [Cucurbita maxima]7.3e-8398.79Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+KSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

XP_023539526.1 uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo]5.3e-8198.18Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

TrEMBL top hitse value%identityAlignment
A0A0A0LE45 Uncharacterized protein4.7e-5979.41Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF
        MDD SA KP  P  NLRRRNSI VPV VPSKLNL   AATKSS G+ ASP  PLAFEL PIKSSS     SL YTSL+DILPSPT+ SSPTA SAANSG+
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV
        EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV

A0A1S3B6B1 uncharacterized protein LOC1034866601.0e-5879.41Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF
        MD+ SA KP PP  NLRRRNSI VPV VPSKLNL   AATK S G+ ASP  PLAFEL PIKSSS     SL YTSLRDILPS T+ SSPTAASAANSG+
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV
        EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV

A0A5A7TKK1 Putative COPII coat assembly protein SEC161.0e-5879.41Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF
        MD+ SA KP PP  NLRRRNSI VPV VPSKLNL   AATK S G+ ASP  PLAFEL PIKSSS     SL YTSLRDILPS T+ SSPTAASAANSG+
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF

Query:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV
        EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACL FLNL IISS+T A DRIFRVVG +FV
Subjt:  EISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFV

A0A6J1H3M0 uncharacterized protein LOC1114593121.2e-83100Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

A0A6J1KY03 uncharacterized protein LOC1114985933.5e-8398.79Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+KSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
        RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY
Subjt:  RLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein1.4e-1044.83Show/hide
Query:  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SPTSMSSPT---AASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFL
        A S  L  EL  +  SS      YTSL+DILP S T++ SP    A ++A SG  I+IRNRLVKQAA +YLQP + +P SS P  LRR+   F       
Subjt:  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SPTSMSSPT---AASAANSGFEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLGFL

Query:  NLHIISSVTKALDRIF
         + ++S+   AL RIF
Subjt:  NLHIISSVTKALDRIF

AT5G06280.1 unknown protein1.9e-1240.56Show/hide
Query:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR
        P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YTSLRDI+ SP + S          SP  ++AA    +ISIR
Subjt:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR

Query:  NRLVKQAAWAYLQP--MSSSPGSSGPHLLRRIWLRFSACLGFL
        NRLVKQAA +YLQP  ++SS  S+G    RR+WL  SA   FL
Subjt:  NRLVKQAAWAYLQP--MSSSPGSSGPHLLRRIWLRFSACLGFL

AT5G06280.3 unknown protein1.9e-1240.56Show/hide
Query:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR
        P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YTSLRDI+ SP + S          SP  ++AA    +ISIR
Subjt:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR

Query:  NRLVKQAAWAYLQP--MSSSPGSSGPHLLRRIWLRFSACLGFL
        NRLVKQAA +YLQP  ++SS  S+G    RR+WL  SA   FL
Subjt:  NRLVKQAAWAYLQP--MSSSPGSSGPHLLRRIWLRFSACLGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTCCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTTGTGCCATCAAAACTAAACCTTTTCGCCTT
CGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTCGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACA
TTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCTGCCTCTGCAGCAAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTAT
CTTCAACCCATGTCTTCCTCTCCGGGATCATCAGGACCCCACCTCCTCCGCCGTATCTGGCTCAGATTTTCAGCTTGTCTAGGCTTCCTCAACCTGCACATAATTTCCAG
CGTGACAAAGGCTTTGGATCGGATATTTCGCGTTGTGGGGTTCAGTTTTGTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTCCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTTGTGCCATCAAAACTAAACCTTTTCGCCTT
CGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTCGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACA
TTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCTGCCTCTGCAGCAAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTAT
CTTCAACCCATGTCTTCCTCTCCGGGATCATCAGGACCCCACCTCCTCCGCCGTATCTGGCTCAGATTTTCAGCTTGTCTAGGCTTCCTCAACCTGCACATAATTTCCAG
CGTGACAAAGGCTTTGGATCGGATATTTCGCGTTGTGGGGTTCAGTTTTGTCTATTAA
Protein sequenceShow/hide protein sequence
MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAY
LQPMSSSPGSSGPHLLRRIWLRFSACLGFLNLHIISSVTKALDRIFRVVGFSFVY