; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein YLS9
Genome locationCmo_Chr06:2504724..2505479
RNA-Seq ExpressionCmoCh06G005200
SyntenyCmoCh06G005200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]4.4e-9572.33Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYKIS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG--GGGVQN
        RERRRK+   NEDEY   SATKT  KTN   KKNP ENVMLL+RN GIEN++L GFISPA +R++Y++R  KLQLE E Y  ++G RNL  G  G G  N
Subjt:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG--GGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP
        G+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSHAGPIARP+KES+P
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP

KAG6596614.1 hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia]6.4e-13999.6Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTT
        RERRRKIQGNEDEYD SSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTT
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTT

Query:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDPK
        RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDPK
Subjt:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDPK

KAG7017495.1 hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-9572.33Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYKIS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG--GGGVQN
        RERRRK+   NEDEY   SATKT  KTN   KKNP ENVMLL+RN GIEN++L GFISPA +R++Y++R  KLQLE E Y  ++G RNL  G  G G  N
Subjt:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG--GGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP
        G+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSHAGPIARP+KES+P
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP

KAG7028150.1 hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-13898.8Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTT
        RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISP TNRFEYDQRFWKLQLEMEKYLI+IGQRNLALGGGGVQNGTT
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTT

Query:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDPK
        RLKTAVCWDCLNAKETGVAAGFHCCAHDAVT GFRSHAGPIARPVKESDPK
Subjt:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDPK

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]2.0e-9574.6Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GFISP  +R+EY+ R  KLQLE EKYL++I   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD
         + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSHAGPIARPVKES+
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein9.5e-9674.6Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GFISP  +R+EY+ R  KLQLE EKYL++I   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD
         + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSHAGPIARPVKES+
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD

A0A5A7TLT1 Protein YLS92.0e-9372.8Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M +T   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GF+SP  +R+EY++R  KLQLE EKYLI++   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKE
         + R +T +C DC++AKE GVAAGFHCCA+DAVT GFRS AGPIARPV++
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKE

A0A6A1UKZ8 Uncharacterized protein7.1e-5952.73Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVE A  VSFPVVF DGER++++G+V VS S +FK+FQSI+S+ IGIS HQF+VYLA     +   ++  R+IPITGK NFG I  +K+CFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQ--GNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG----GGG
        RER+R+ Q    ED+Y ++S+   + + N    K P ENVMLL+RN  I ++  PGF SP  +R  Y++R  +LQ+E E+YL N+G R L LG    GG 
Subjt:  RERRRKIQ--GNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALG----GGG

Query:  VQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP
         +N  TR     C +C+ AK  G   GFH C +DAVT+GFRS AGPIARPVK S+P
Subjt:  VQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESDP

A0A6P9E6Z6 uncharacterized protein LOC1183479053.6e-5551.17Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MV  A  VSFPVVF DGER+  +G V V  S  FKNFQSILS+ IGIS HQF+VYLA     +   ++  R+IPITGKVNF AI+ EK+CFFLV+LKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI--QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL----GGGG
        RER+R+   +  E+EY  SS    M+      KK P+ NVMLL+R+ G E +  PG++SP  +R  Y++R  +LQ+E E+YLIN+G   L+L     GG 
Subjt:  RERRRKI--QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLAL----GGGG

Query:  VQNGTTR--LKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKES
         + G  R  +    C +C+ AK+ G   GFH C +D VT GFRS AGPIARPVK S
Subjt:  VQNGTTR--LKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKES

W9S997 Uncharacterized protein6.0e-5049.4Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVE  G VSFPVVF DGE + ++GSVAV ++ EFK FQ++LS+ IGIS HQF+V+L        S+ + RR+IPITGKVNFGAI  EK CFF+VVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSK--KKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNG
        R RRRK   +  + D+          +HS    KNP  NVMLL+R+  ++       +S +++R EY+ R   LQLE E YL+N+G     L G G +  
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSK--KKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNG

Query:  TTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD
         T     VC DC+ AKE G  AGFH C +DAVT GFR  AGPIARP +  +
Subjt:  TTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTTGFRSHAGPIARPVKESD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTT
TCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCC
CTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAAC
GAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCAT
CGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGCGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCAACATAG
GGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCC
GGATTTCACTGCTGCGCCCACGACGCCGTGACGACGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTT
TCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCC
CTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAAC
GAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCAT
CGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGCGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCAACATAG
GGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCC
GGATTTCACTGCTGCGCCCACGACGCCGTGACGACGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG
Protein sequenceShow/hide protein sequence
MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGN
EDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYLINIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAA
GFHCCAHDAVTTGFRSHAGPIARPVKESDPK