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CmoCh06G005210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionnudix hydrolase 26, chloroplastic-like
Genome locationCmo_Chr06:2505771..2507918
RNA-Seq ExpressionCmoCh06G005210
SyntenyCmoCh06G005210
Gene Ontology termsGO:0016462 - pyrophosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028151.1 hypothetical protein SDJN02_09331 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-24100Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSRKPAYAQVMKDFG
        MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSRKPAYAQVMKDFG
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSRKPAYAQVMKDFG
XP_022151433.1 nudix hydrolase 26, chloroplastic-like isoform X1 [Momordica charantia]3.6e-0779.49Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        MEFPPE YRRNVGI  FN +GKIFAAS LNR EI EMPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
XP_022151434.1 nudix hydrolase 26, chloroplastic-like isoform X2 [Momordica charantia]3.6e-0779.49Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        MEFPPE YRRNVGI  FN +GKIFAAS LNR EI EMPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
XP_023005837.1 uncharacterized protein LOC111498720 isoform X1 [Cucurbita maxima]1.4e-1184.44Show/hide
Query:  MEFPPERYRRNVGISRFNFTGK-IFAASWLNRQEILEMPQDANSR
        MEFPPERYRRNVGISRFNF+GK IFAASWLNRQEI EMPQ   S+
Subjt:  MEFPPERYRRNVGISRFNFTGK-IFAASWLNRQEILEMPQDANSR
XP_023005838.1 uncharacterized protein LOC111498720 isoform X2 [Cucurbita maxima]5.7e-1386.36Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSR
        MEFPPERYRRNVGISRFNF+GKIFAASWLNRQEI EMPQ   S+
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSR
TrEMBL top hitse value%identityAlignment
A0A6J1DB53 nudix hydrolase 26, chloroplastic-like isoform X31.7e-0779.49Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        MEFPPE YRRNVGI  FN +GKIFAAS LNR EI EMPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
A0A6J1DC58 nudix hydrolase 26, chloroplastic-like isoform X11.7e-0779.49Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        MEFPPE YRRNVGI  FN +GKIFAAS LNR EI EMPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
A0A6J1DD27 nudix hydrolase 26, chloroplastic-like isoform X21.7e-0779.49Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        MEFPPE YRRNVGI  FN +GKIFAAS LNR EI EMPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
A0A6J1KU97 uncharacterized protein LOC111498720 isoform X16.8e-1284.44Show/hide
Query:  MEFPPERYRRNVGISRFNFTGK-IFAASWLNRQEILEMPQDANSR
        MEFPPERYRRNVGISRFNF+GK IFAASWLNRQEI EMPQ   S+
Subjt:  MEFPPERYRRNVGISRFNFTGK-IFAASWLNRQEILEMPQDANSR
A0A6J1L3A4 uncharacterized protein LOC111498720 isoform X22.8e-1386.36Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSR
        MEFPPERYRRNVGISRFNF+GKIFAASWLNRQEI EMPQ   S+
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSR
SwissProt top hitse value%identityAlignment
Q9CAF2 Nudix hydrolase 26, chloroplastic6.6e-0453.85Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        ME PPE YRRNVG+   N + KIF AS L+     +MPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
Arabidopsis top hitse value%identityAlignment
AT3G10620.1 nudix hydrolase homolog 264.7e-0553.85Show/hide
Query:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ
        ME PPE YRRNVG+   N + KIF AS L+     +MPQ
Subjt:  MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTCCTCCAGAAAGATACAGAAGAAACGTTGGGATTTCTCGCTTTAACTTTACTGGAAAAATTTTTGCTGCTTCATGGCTGAACAGGCAAGAAATCTTGGAAAT
GCCTCAGGATGCTAATTCCCGGAAGCCTGCTTATGCGCAAGTGATGAAAGATTTTGGTAACTTCATACAAGGAAATCGGGAAGATGCCATTTCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ACCAAATTGGCCCTCTGAGTAATAGAACTCTCTCGTCAACGCCTCGTTGGAAGGGGATTCCGCTTTGTTCTTGCCTCTTCCGAGCTTCGTCATCATCCATGGAGTTTCCT
CCAGAAAGATACAGAAGAAACGTTGGGATTTCTCGCTTTAACTTTACTGGAAAAATTTTTGCTGCTTCATGGCTGAACAGGCAAGAAATCTTGGAAATGCCTCAGGATGC
TAATTCCCGGAAGCCTGCTTATGCGCAAGTGATGAAAGATTTTGGTAACTTCATACAAGGAAATCGGGAAGATGCCATTTCTTTTTAGCAGAGGGAAACCCAATTAGTTA
GGTATGGATTCATGTTCATACTGGAAATCTGAGGGGAAGATATTGGAATCAGAACCTTCACACATTTGTCCAGCTATAAAAGGATTGAAGTGTGCAAATATGAGATGGTA
AATGATTTCCAGGAGCGTGATTGTGACGCTCTTCTCCTTTTAGCTTTAAAGCTACGTTTGGAAGAATGAGTATGAAGGAATTTTGATTCATAGAATGGAATCAGAACGTG
GGTTTCACTTTTAAATTTGGAATTATTTTTTCTATCTATATCGATTGACATAGTTGTTTTTTTTT
Protein sequenceShow/hide protein sequence
MEFPPERYRRNVGISRFNFTGKIFAASWLNRQEILEMPQDANSRKPAYAQVMKDFGNFIQGNREDAISF