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CmoCh06G005310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSyntaxin of plants 121
Genome locationCmo_Chr06:2570120..2571344
RNA-Seq ExpressionCmoCh06G005310
SyntenyCmoCh06G005310
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN67514.1 syntaxin of plants 121 [Prunus dulcis]9.9e-1446.46Show/hide
Query:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGR
        P P+ GR+ +AA    +GG+GA++ L++DL +L LLE +G++ +HARSEVL+SL +V+RL + +  +EVLVE L+LLE V H  +V +ELV + +   R
Subjt:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGR

CAN69202.1 hypothetical protein VITISV_023038 [Vitis vinifera]5.6e-1738.73Show/hide
Query:  VEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSL
        V  FA + E+  L G  +L  DL+    E +H + + L +  +      V GR+ AA+    +GG+GAI+  +++L+EL LLES+G++R+H RSE+L+ +
Subjt:  VEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSL

Query:  SIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSR
         +V+ L L + VVE+L++ L L EF+   F++F+ELVEI +R
Subjt:  SIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSR

KAF7804218.1 nuclear transcription factor Y subunit A-10-like [Senna tora]3.3e-1737.22Show/hide
Query:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS
        +V   A +S +P L+GLPVL   LLPQI+E  H I Q L QP ++                      GAI+RL+S+L+EL LLES+ ++ +HAR++VL+ 
Subjt:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS

Query:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDM--AVARE---------RARGEQIVH
        L +VK L L +   E LVE  +LLE +  R ++ +ELVE+ +  G+    HL+D+   V R+            G+Q+VH
Subjt:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDM--AVARE---------RARGEQIVH

KYP62075.1 hypothetical protein KK1_016596, partial [Cajanus cajan]9.2e-2036.65Show/hide
Query:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS
        V+   A + E+  LHGLPVL R  +  ++E LH +L+ L Q  +     PV G + +AAR   +GG+GA++ L+ +L+EL LLE + N+ +HAR+EVL+ 
Subjt:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS

Query:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDMAVARER
        L +V+RL L +  +E   + L+LL+ + H  +V +ELV++          HL+ + V   R
Subjt:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDMAVARER

XP_034215497.1 uncharacterized protein LOC117627490 [Prunus dulcis]3.8e-1345.54Show/hide
Query:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRG
        P P+ GR+ +AA    +G +GA++ L++DL +L LLE +G++ +HARSEVL+SL +V+RL + +  +EVLVE L+LLE V H  +V +ELV + +   R 
Subjt:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRG

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A151T4X0 Uncharacterized protein (Fragment)4.5e-2036.65Show/hide
Query:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS
        V+   A + E+  LHGLPVL R  +  ++E LH +L+ L Q  +     PV G + +AAR   +GG+GA++ L+ +L+EL LLE + N+ +HAR+EVL+ 
Subjt:  VVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNS

Query:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDMAVARER
        L +V+RL L +  +E   + L+LL+ + H  +V +ELV++          HL+ + V   R
Subjt:  LSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDMAVARER

A0A5H2XJP6 Syntaxin of plants 1214.8e-1446.46Show/hide
Query:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGR
        P P+ GR+ +AA    +GG+GA++ L++DL +L LLE +G++ +HARSEVL+SL +V+RL + +  +EVLVE L+LLE V H  +V +ELV + +   R
Subjt:  PSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGR

A5AM92 Uncharacterized protein2.7e-1738.73Show/hide
Query:  VEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSL
        V  FA + E+  L G  +L  DL+    E +H + + L +  +      V GR+ AA+    +GG+GAI+  +++L+EL LLES+G++R+H RSE+L+ +
Subjt:  VEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSL

Query:  SIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSR
         +V+ L L + VVE+L++ L L EF+   F++F+ELVEI +R
Subjt:  SIVKRLTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCGATGTCGTCGAGTTTTTCGCCTTTAACAGTGAAATACCTCCGCTGCACGGTCTCCCTGTACTCAGAAGAGATTTGTTGCCTCAAATTATTGAACCCCTCCA
TCGAATCCTGCAATTTCTTCCTCAACCCACTGAGCACAGAAGTCCGAGTCCGGTCAGAGGACGATCCAGGGCCGCAGCCAGGTTGGGTCCGATTGGAGGCATTGGAGCGA
TCAAGCGCCTCCAATCGGACCTTAATGAGCTTAGCCTTCTTGAGAGCAAGGGAAACATCCGAATCCATGCGAGATCGGAGGTCCTTAACAGCCTTAGCATTGTGAAGCGT
CTTACTCTGTTCATGGGAGTCGTAGAGGTTCTGGTAGAGTTTCTCAAGCTCCTTGAGTTCGTCTTTCACAGATTCAACGTCTTCAAAGAACTTGTCGAGATTAGCAGCCG
TAGGGGAAGAGGAGGAGATACCCATCTCAACGACATGGCTGTCGCGAGAGAAAGAGCGAGAGGAGAACAAATCGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCGATGTCGTCGAGTTTTTCGCCTTTAACAGTGAAATACCTCCGCTGCACGGTCTCCCTGTACTCAGAAGAGATTTGTTGCCTCAAATTATTGAACCCCTCCA
TCGAATCCTGCAATTTCTTCCTCAACCCACTGAGCACAGAAGTCCGAGTCCGGTCAGAGGACGATCCAGGGCCGCAGCCAGGTTGGGTCCGATTGGAGGCATTGGAGCGA
TCAAGCGCCTCCAATCGGACCTTAATGAGCTTAGCCTTCTTGAGAGCAAGGGAAACATCCGAATCCATGCGAGATCGGAGGTCCTTAACAGCCTTAGCATTGTGAAGCGT
CTTACTCTGTTCATGGGAGTCGTAGAGGTTCTGGTAGAGTTTCTCAAGCTCCTTGAGTTCGTCTTTCACAGATTCAACGTCTTCAAAGAACTTGTCGAGATTAGCAGCCG
TAGGGGAAGAGGAGGAGATACCCATCTCAACGACATGGCTGTCGCGAGAGAAAGAGCGAGAGGAGAACAAATCGTTCATTGA
Protein sequenceShow/hide protein sequence
MALDVVEFFAFNSEIPPLHGLPVLRRDLLPQIIEPLHRILQFLPQPTEHRSPSPVRGRSRAAARLGPIGGIGAIKRLQSDLNELSLLESKGNIRIHARSEVLNSLSIVKR
LTLFMGVVEVLVEFLKLLEFVFHRFNVFKELVEISSRRGRGGDTHLNDMAVARERARGEQIVH