; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationCmo_Chr06:2574103..2577106
RNA-Seq ExpressionCmoCh06G005330
SyntenyCmoCh06G005330
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596625.1 Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. sororia]2.7e-16794.1Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHN FELGF QPL          HYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAADNC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

KAG7028162.1 Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-17797.2Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHN FELGF QPLTCENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAADNC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

XP_022956068.1 nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]1.6e-18099.07Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAADNC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

XP_023005692.1 nuclear transcription factor Y subunit A-10-like [Cucurbita maxima]1.5e-17094.72Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQ  HGLEKLNTAPFSIYPGDTKNSV AQKPSPVFS  
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
          LSEYHN FELGF QPL CENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAA+NC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

XP_023539687.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]1.3e-17797.52Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHN FELGF QPL CENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAADNC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

TrEMBL top hitse value%identityAlignment
A0A0A0LE75 Nuclear transcription factor Y subunit3.4e-14482.87Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGKEFAATKQ-AAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPV
        MAPQTG LKEHE I+PNSLGQLS +P RLWS A G GS SIFGDFGQVK    QL SNGKEF  TKQ  AHGL+KLNTAPFSIYPGD K S+DAQKPSPV
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGKEFAATKQ-AAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPV

Query:  FSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRH
        FSLQSPL+EYHN FELGF QPL C NYPYM+QHYGI+SAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAKAMM+N+ ARTRKPY+HESRH
Subjt:  FSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRH

Query:  LHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE
        LHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLAE
Subjt:  LHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE

Query:  IIDGGGHGMVLPKWVAAADNC
        IIDGGGHGMVLPKWVAAADNC
Subjt:  IIDGGGHGMVLPKWVAAADNC

A0A1S3B7N7 Nuclear transcription factor Y subunit6.9e-14582.92Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQ-AAHGLEKLNTAPFSIYPGDTKNSVDAQKPSP
        MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNGKEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQKPSP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQ-AAHGLEKLNTAPFSIYPGDTKNSVDAQKPSP

Query:  VFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESR
        VFSLQSPL+EYHN FELGF QPL C NYPYMEQHYGI+SAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAKAMM+N+ ARTRKPY+HESR
Subjt:  VFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESR

Query:  HLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA
        HLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Subjt:  HLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA

Query:  EIIDGGGHGMVLPKWVAAADNC
        EIIDGGGHGMVLPKWVAAADNC
Subjt:  EIIDGGGHGMVLPKWVAAADNC

A0A6J1DDB6 Nuclear transcription factor Y subunit1.3e-14684Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQAA----HGLEKLNTAPFSIYPGDTKNSVDAQK
        MAPQTGYLKEHEGIVPNSLGQLSSSP RLWS AFG GS +IFGDFGQ+K    EQL SNGKEF   KQAA    HGLEK+NTAPFSIYPGD KNSVDAQK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQAA----HGLEKLNTAPFSIYPGDTKNSVDAQK

Query:  PSPVFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIH
        PSPVFSLQSPLSEYH  FELGF QP+ C NYPYMEQHYGI+SAYGPQIPGRVMLPM LTTDD PIYVNAKQYHGIIRRRQIRAKAMM+NR ARTRKPY+H
Subjt:  PSPVFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIH

Query:  ESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ
        ESRHLHAMRRPRGSGGRFLN KN  + K S+  KKVD+VNLS+ TGSQCS VLQSESGTLNS NEAK GRGFNL SSEV SMFSRGLQRFQI+H+ PSMQ
Subjt:  ESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNC
        SLAEIIDGGGHGMVLPKWVAAADNC
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNC

A0A6J1GVR8 Nuclear transcription factor Y subunit7.8e-18199.07Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAADNC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

A0A6J1KTV1 Nuclear transcription factor Y subunit7.4e-17194.72Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQ  HGLEKLNTAPFSIYPGDTKNSV AQKPSPVFS  
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQ

Query:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
          LSEYHN FELGF QPL CENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCS--CF
        GGHGMVLPKWVAAA+NC   CF
Subjt:  GGHGMVLPKWVAAADNCS--CF

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.4e-2047.37Show/hide
Query:  GFSQPLTCENYPYMEQHYGIISAYGPQIPGRVML----------PMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRR
        G +  +    YPY + +Y  I A  PQ    V L          P+     +EP++VNAKQYHGI+RRRQ RA+   +N+  ++RKPY+HESRHLHA+RR
Subjt:  GFSQPLTCENYPYMEQHYGIISAYGPQIPGRVML----------PMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRR

Query:  PRGSGGRFLNMKNQ
        PRG GGRFLN K +
Subjt:  PRGSGGRFLNMKNQ

Q8LFU0 Nuclear transcription factor Y subunit A-102.8e-4241.69Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF+
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS

Query:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA
        K              D    S  + SQ SEV   E+ T+NS  EA +    NL  S V+SM                  S +    G   GMV+P KW A
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA

Query:  AADNCSC
        AA +  C
Subjt:  AADNCSC

Q8VY64 Nuclear transcription factor Y subunit A-41.9e-2241.72Show/hide
Query:  FSQPLTCENYPYMEQHYGIISA----------------YGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHL
        +S+P+    YPY + +Y  + A                 G Q PG   +P++    +EP++VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHL
Subjt:  FSQPLTCENYPYMEQHYGIISA----------------YGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHL

Query:  HAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSE
        HA+RRPRG GGRFLN K +  +       K ++   SD   S+ S  L+SE
Subjt:  HAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSE

Q93ZH2 Nuclear transcription factor Y subunit A-31.9e-2248Show/hide
Query:  NYPYMEQHYG--IISAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG
        ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGG
Subjt:  NYPYMEQHYG--IISAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG

Query:  RFLNMKNQPNEKSSMVPKKVDDVNL
        RFLN K    E      ++ +   L
Subjt:  RFLNMKNQPNEKSSMVPKKVDDVNL

Q9M9X4 Nuclear transcription factor Y subunit A-23.1e-4142.68Show/hide
Query:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKP-SPVFSLQSPLSEYHNPFELGF
        L S+P   W  AFG   L   S+ GD   F  VK  + S G+      + ++    L    FS+  GD K+     KP    FS+QSP        ELGF
Subjt:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKP-SPVFSLQSPLSEYHNPFELGF

Query:  SQPLTCENYPYME-QHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSGGR
        SQP     YPY E Q+YG++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R RKPY+H SRHLHA+RRPRGSGGR
Subjt:  SQPLTCENYPYME-QHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSGGR

Query:  FLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDGGG
        FLN K+Q  E S    KK      +        + SQ SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL        
Subjt:  FLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDGGG

Query:  HGMVLP-KWVAAA---DNCSC
         GMV+P KW+AAA   DN  C
Subjt:  HGMVLP-KWVAAA---DNCSC

Arabidopsis top hitse value%identityAlignment
AT1G72830.1 nuclear factor Y, subunit A31.3e-2348Show/hide
Query:  NYPYMEQHYG--IISAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG
        ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGG
Subjt:  NYPYMEQHYG--IISAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG

Query:  RFLNMKNQPNEKSSMVPKKVDDVNL
        RFLN K    E      ++ +   L
Subjt:  RFLNMKNQPNEKSSMVPKKVDDVNL

AT3G05690.1 nuclear factor Y, subunit A22.2e-4242.68Show/hide
Query:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKP-SPVFSLQSPLSEYHNPFELGF
        L S+P   W  AFG   L   S+ GD   F  VK  + S G+      + ++    L    FS+  GD K+     KP    FS+QSP        ELGF
Subjt:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKP-SPVFSLQSPLSEYHNPFELGF

Query:  SQPLTCENYPYME-QHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSGGR
        SQP     YPY E Q+YG++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R RKPY+H SRHLHA+RRPRGSGGR
Subjt:  SQPLTCENYPYME-QHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSGGR

Query:  FLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDGGG
        FLN K+Q  E S    KK      +        + SQ SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL        
Subjt:  FLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDGGG

Query:  HGMVLP-KWVAAA---DNCSC
         GMV+P KW+AAA   DN  C
Subjt:  HGMVLP-KWVAAA---DNCSC

AT5G06510.1 nuclear factor Y, subunit A102.0e-4341.69Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF+
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS

Query:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA
        K              D    S  + SQ SEV   E+ T+NS  EA +    NL  S V+SM                  S +    G   GMV+P KW A
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA

Query:  AADNCSC
        AA +  C
Subjt:  AADNCSC

AT5G06510.2 nuclear factor Y, subunit A102.0e-4341.69Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  KP   F++QS        FE GF+
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGL--EKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFS

Query:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA
        K              D    S  + SQ SEV   E+ T+NS  EA +    NL  S V+SM                  S +    G   GMV+P KW A
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVA

Query:  AADNCSC
        AA +  C
Subjt:  AADNCSC

AT5G06510.3 nuclear factor Y, subunit A102.3e-3944.81Show/hide
Query:  GDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMM
        G  K+S D  KP   F++QS        FE GF+QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA  
Subjt:  GDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTCENYPYMEQHYGIISAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMM

Query:  KNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGL
          + +R RKPY+H SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+NS  EA +    NL  S V+SM     
Subjt:  KNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGL

Query:  QRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVAAADNCSC
                     S +    G   GMV+P KW AAA +  C
Subjt:  QRFQINHIGPSMQSLAEIIDGGGHGMVLP-KWVAAADNCSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCCTCCCCTACTCGACTGTGGAGTGCTGCCTTTGGGCTAGG
TTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTGCTCATGGTTTGGAAAAACTGAACA
CTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACCTTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCCTTTC
GAGCTCGGATTCAGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCATCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCC
AATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTG
CAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAG
AGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGA
AGCCAAGGATGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGAGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCAC
TGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTCTTGCTTCAATGTCGTCGTTGATGGCCATTGTTTCAGG
CTTCGCGAAGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTAATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCCTCCCCTACTCGACTGTGGAGTGCTGCCTTTGGGCTAGG
TTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTGCTCATGGTTTGGAAAAACTGAACA
CTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACCTTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCCTTTC
GAGCTCGGATTCAGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCATCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCC
AATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTG
CAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAG
AGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGA
AGCCAAGGATGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGAGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCAC
TGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTCTTGCTTCAATGTCGTCGTTGATGGCCATTGTTTCAGG
CTTCGCGAAGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTAATCATTAG
Protein sequenceShow/hide protein sequence
MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPF
ELGFSQPLTCENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEK
SSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLPKWVAAADNCSCFNVVVDGHCFR
LREEDSPRVWLQWQVIFGSNH