CuGenDBv2

Gene ID	CmoCh06G005440
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Fra a 1-associated protein
Genome location	Cmo_Chr06:2634673..2637312
RNA-Seq Expression	CmoCh06G005440
Synteny	CmoCh06G005440
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596634.1 Fra a 1-associated protein, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-95

98.89

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

XP_022940131.1 uncharacterized protein LOC111445845 [Cucurbita moschata]

2.8e-96

100

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

XP_023005676.1 uncharacterized protein LOC111498606 [Cucurbita maxima]

4.1e-95

98.33

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRG SGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPP+F+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]

6.3e-96

99.44

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLF+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]

2.7e-70

75.38

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MG VWR  +GELDS A D    NN +  S  DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFS G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMR---------------QNEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+RE SSSPSMR               Q EPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMR---------------QNEPDSGHVDLSGLARDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGU7 Uncharacterized protein

5.4e-61

67.68

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MG VWR  + + DS A D    NN ++ SS D CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SN+E TEEDVT+++V NRSFS G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  S--SEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ----------------NEPDSGHVDLSGLARDV
        S  SE++P +FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SSS SMR+                 EPDSGHVDLSGLARDV
Subjt:  S--SEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ----------------NEPDSGHVDLSGLARDV

A0A1S3B6X7 uncharacterized protein LOC103486704

8.1e-65

70.26

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MG VW   +G+LDS A DG   +N +  SS DRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSN+EFTEEDVT+++V NRSF  G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SS  SMR+                EPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV

A0A6J1DDK9 uncharacterized protein LOC111019393

1.5e-63

72.31

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MG VWR   GE D  AGD       S  SSGDRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSN+EFTEEDV ++VV NRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
        +S +QPF FPGLRSDIEAIE +LFGSMKGFF+AAEEI+NGFFG  RDP  F  E SSSPSMR+               NEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV

A0A6J1FHK7 uncharacterized protein LOC111445845

1.4e-96

100

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

A0A6J1KVN4 uncharacterized protein LOC111498606

2.0e-95

98.33

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Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
        MGGVWRG SGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPP+F+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

SwissProt top hits

e value

%identity

Alignment

W5X2N3 Fra a 1-associated protein

6.2e-46

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Query:  MGGVWRG---ASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSF
        MG VW+      G ++  A D       S    GDRCSTRKVV++QCKTEEVEPGKF+RKCE+TEE+LRDC+GRP+EV+QSN+E+TE+DVT++V+   S 
Subjt:  MGGVWRG---ASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSF

Query:  SSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP----------------DSGHVDLSGLARDV
        S GS++   FNFPGL+ DI+ IEH+  G +  FF+AAE+++NGFF SF  P +F   PS+S PS R+  P                 SG VDLSGLARDV
Subjt:  SSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP----------------DSGHVDLSGLARDV

Arabidopsis top hits

e value

%identity

Alignment

AT2G35900.1 unknown protein

4.6e-36

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Query:  MGGVW-------RGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVN
        MG +W       +  +   D P GD          ++ + CST  VV+SQCKTEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVT+++V 
Subjt:  MGGVW-------RGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVN

Query:  NRSFSSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREP----SSSPSMRQNEPD---------SGHVDLSGLARDV
          +  +   +  P NFPGLR D++AIE      MK FFDAAEE+ +  F    D    +R       + P + ++  D         SG +DLSGLA+DV
Subjt:  NRSFSSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREP----SSSPSMRQNEPD---------SGHVDLSGLARDV

Sequences

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CDS sequence

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ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTCGACTAG
AAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCG
AAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGGTGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCT
GGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGA
TCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA

mRNA sequence

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Protein sequence

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MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEVVNNRSFSSGSSEYQPFNFP
GLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV

CmoCh06G005440 (gene) of Cucurbita moschata (Rifu) v1 genome