; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPollen preferential protein
Genome locationCmo_Chr06:2664689..2665165
RNA-Seq ExpressionCmoCh06G005490
SyntenyCmoCh06G005490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043783.1 uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa]2.1e-5570.89Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE
        MSN +M RPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAIYKVPAGLCRRALRT+RR  L +KG +P+RRGR S   YDE
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE

Query:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
         D+QIL+ GK++++SE +G++++ETERKVMELE EMWE FY TGFWRSPS+R+Q S S
Subjt:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

XP_011652052.1 uncharacterized protein LOC105434984 [Cucumis sativus]2.1e-5572.15Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE
        MSN +MFRPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAIYKVPAGLCRRALRT+RR  L +KG  P+RRGR S   YDE
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE

Query:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
         D+QIL+ GK +++SE +G+++ ETERKVMELE EMWE FY TGFWRSPS+RDQ S S
Subjt:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

XP_022955715.1 uncharacterized protein LOC111457605 [Cucurbita moschata]1.4e-83100Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
        MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA

Query:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
        DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
Subjt:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI

XP_023539516.1 uncharacterized protein LOC111800159 [Cucurbita pepo subsp. pepo]1.3e-8197.47Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
        MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLP+RRGRCSACSYDEA
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA

Query:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
        DLQILTGGK M+ASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQI+DSI
Subjt:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI

XP_038905288.1 uncharacterized protein LOC120091362 [Benincasa hispida]8.6e-5773.72Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE
        MSN +M RPP + R QPLL SKS+ GS+RFAEVAGGTTAECAAVCCCCPC VL+FLVLAIYKVPAGLCRRALRT+RR  L +KG +P+RR R S   YDE
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE

Query:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQIS
         D+QIL+ GK +++SE KG+KS+ETER+VMELE EMWE FY TGFWRSPSQRDQIS
Subjt:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQIS

TrEMBL top hitse value%identityAlignment
A0A0A0LGV0 Uncharacterized protein1.0e-5572.15Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE
        MSN +MFRPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAIYKVPAGLCRRALRT+RR  L +KG  P+RRGR S   YDE
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE

Query:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
         D+QIL+ GK +++SE +G+++ ETERKVMELE EMWE FY TGFWRSPS+RDQ S S
Subjt:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

A0A1S4DUJ2 uncharacterized protein LOC1034867102.2e-5066.88Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
        MSN +M RPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAIYKVPAGLCRRALRT+RR  L+K              YDE 
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA

Query:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
        D+QIL+ GK++++SE +G++++ETERKVMELE EMWE FY TGFWRSPS+R+Q S S
Subjt:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

A0A5D3DQ13 Uncharacterized protein1.0e-5570.89Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE
        MSN +M RPP S R QPLL SKS  GS+RFAEVAGGTTAECAAVCCCCPC V++FLVLAIYKVPAGLCRRALRT+RR  L +KG +P+RRGR S   YDE
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLPSRRGRCSACSYDE

Query:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
         D+QIL+ GK++++SE +G++++ETERKVMELE EMWE FY TGFWRSPS+R+Q S S
Subjt:  ADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

A0A6J1GVU4 uncharacterized protein LOC1114576056.8e-84100Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
        MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEA

Query:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
        DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
Subjt:  DLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI

A0A6J1J6H8 uncharacterized protein LOC1114817889.0e-4461.64Show/hide
Query:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL--RKGTLPSRRGRCSACSYD
        MSN VMFRP LS   Q L+ SKS+  ++RFAEVAGGTTAECAAV CCCPC  ++FLVLAIYK+PAGLCRRALRT+ R ++  +KG  P+R GR      D
Subjt:  MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL--RKGTLPSRRGRCSACSYD

Query:  EADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS
        +AD+Q++T  K ++        S+E ERKV+ELE EMWE FY TGFWRSPSQRDQIS S
Subjt:  EADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein2.8e-2139.53Show/hide
Query:  MSNKVMFRPPL--SKREQPLLRSKSIPGSL-----RFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALR-------TRRRHSLRKGTLP
        M+  V+ + PL  S  E  +  S     SL     +  EVAGG  AECAAV CCCPC V++ +VLA+YKVPA +C++A R       TR+RH L      
Subjt:  MSNKVMFRPPL--SKREQPLLRSKSIPGSL-----RFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALR-------TRRRHSLRKGTLP

Query:  SRRGRCSACSYDEADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI
                   +E DL      +  H S   G+ +D     V+ LE EM + FYG GFWRSPSQ+D  S S+
Subjt:  SRRGRCSACSYDEADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI

AT3G11690.1 unknown protein1.3e-2644.69Show/hide
Query:  PPLSKREQPLL-RSKSIP------GSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLP--------SRRGR-
        P  S R QPLL RS S P      G    AE  GGTTA CAAV CCCPC +++ LVLAIYKVP G+CRRA+R+RRR  L + G LP         R  R 
Subjt:  PPLSKREQPLL-RSKSIP------GSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSL-RKGTLP--------SRRGR-

Query:  ------------CSACSYDEAD---LQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQIS
                        S DE D   L +   GK++       +++DE +  V+ LE EMW  FYG GFWRSPSQR+ +S
Subjt:  ------------CSACSYDEAD---LQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQIS

AT5G06380.1 unknown protein3.1e-2041.06Show/hide
Query:  REQPLLRSKSIP----GSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEADLQILTGGK
        ++  L RS S P    G    AE  GGTTA CAA+C C PC V++ +VLA+YK+P GLCRRA+R  RR  L K              + E+  +   GG 
Subjt:  REQPLLRSKSIP----GSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEADLQILTGGK

Query:  ---AMHASELKGKKSDETE--RKVMELETEMWETFYGTGFWRSPSQRDQIS
           A+H  E + ++ +E E    V+ LE EMW  FY  GFWRS SQ +  S
Subjt:  ---AMHASELKGKKSDETE--RKVMELETEMWETFYGTGFWRSPSQRDQIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATAAGGTTATGTTCCGTCCGCCATTGTCGAAACGTGAGCAACCACTGTTACGGAGCAAATCCATACCTGGAAGCCTCCGGTTCGCGGAGGTTGCTGGCGGCAC
AACCGCCGAGTGCGCTGCTGTGTGCTGTTGTTGTCCTTGCTTTGTCCTCCACTTCCTCGTCCTCGCCATTTACAAGGTTCCGGCCGGGCTCTGCCGCCGCGCTTTAAGGA
CGAGGCGCCGGCATAGTCTAAGGAAGGGAACTCTTCCGTCGAGGCGCGGGCGGTGCTCCGCCTGCAGTTACGACGAGGCGGATCTTCAGATTCTTACCGGCGGAAAAGCG
ATGCACGCATCGGAACTGAAAGGTAAAAAATCGGACGAAACGGAAAGGAAAGTTATGGAACTGGAAACAGAGATGTGGGAGACTTTTTACGGTACTGGTTTCTGGAGAAG
CCCCTCTCAGAGAGATCAAATTTCAGATTCTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATAAGGTTATGTTCCGTCCGCCATTGTCGAAACGTGAGCAACCACTGTTACGGAGCAAATCCATACCTGGAAGCCTCCGGTTCGCGGAGGTTGCTGGCGGCAC
AACCGCCGAGTGCGCTGCTGTGTGCTGTTGTTGTCCTTGCTTTGTCCTCCACTTCCTCGTCCTCGCCATTTACAAGGTTCCGGCCGGGCTCTGCCGCCGCGCTTTAAGGA
CGAGGCGCCGGCATAGTCTAAGGAAGGGAACTCTTCCGTCGAGGCGCGGGCGGTGCTCCGCCTGCAGTTACGACGAGGCGGATCTTCAGATTCTTACCGGCGGAAAAGCG
ATGCACGCATCGGAACTGAAAGGTAAAAAATCGGACGAAACGGAAAGGAAAGTTATGGAACTGGAAACAGAGATGTGGGAGACTTTTTACGGTACTGGTTTCTGGAGAAG
CCCCTCTCAGAGAGATCAAATTTCAGATTCTATATGA
Protein sequenceShow/hide protein sequence
MSNKVMFRPPLSKREQPLLRSKSIPGSLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLPSRRGRCSACSYDEADLQILTGGKA
MHASELKGKKSDETERKVMELETEMWETFYGTGFWRSPSQRDQISDSI