; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:2682120..2687302
RNA-Seq ExpressionCmoCh06G005550
SyntenyCmoCh06G005550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWW39451.1 hypothetical protein BHE74_00055220 [Ensete ventricosum]2.3e-0544.79Show/hide
Query:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG
        V    +SSG +VKPVKE +KP+LALEA L+  PLP SS+S+F C L   L    R  P    GE   S    L FLD +  PL+  T   S   VG
Subjt:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG

RZR74816.1 hypothetical protein BHM03_00043913 [Ensete ventricosum]2.3e-0544.79Show/hide
Query:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG
        V    +SSG +VKPVKE +KP+LALEA L+  PLP SS+S+F C L   L    R  P    GE   S    L FLD +  PL+  T   S   VG
Subjt:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG

THG20656.1 hypothetical protein TEA_001012 [Camellia sinensis var. sinensis]4.0e-1860.36Show/hide
Query:  ISSSLNVLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVCLLGFLDNVKLPLSPTTPFASLLVV
        +SSSLN  ES +SSGG VKPVKE + PKLALEA LRAAPL  SS+SSF  AL+ FL+CVF  L L  PGE AV+  LL FLD V L L+   P AS L +
Subjt:  ISSSLNVLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVCLLGFLDNVKLPLSPTTPFASLLVV

Query:  GDLNAAATFSN
        GD   A T SN
Subjt:  GDLNAAATFSN

THU68467.1 hypothetical protein C4D60_Mb08t04200 [Musa balbisiana]3.1e-1057.14Show/hide
Query:  LRISSSLNVLESA-ISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGE-GAVSVCLLGFLDNVKLP
        L +SSSL  L SA +SSGG+VKPV E +KP+LALEALL+AAPL  SSKSSFSC L DFL+      P   PGE   V    L FLD +  P
Subjt:  LRISSSLNVLESA-ISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGE-GAVSVCLLGFLDNVKLP

TrEMBL top hitse value%identityAlignment
A0A445MKR3 Uncharacterized protein1.1e-0544.79Show/hide
Query:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG
        V    +SSG +VKPVKE +KP+LALEA L+  PLP SS+S+F C L   L    R  P    GE   S    L FLD +  PL+  T   S   VG
Subjt:  VLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVC-LLGFLDNVKLPLSPTTPFASLLVVG

A0A4S4EWA0 Uncharacterized protein1.9e-1860.36Show/hide
Query:  ISSSLNVLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVCLLGFLDNVKLPLSPTTPFASLLVV
        +SSSLN  ES +SSGG VKPVKE + PKLALEA LRAAPL  SS+SSF  AL+ FL+CVF  L L  PGE AV+  LL FLD V L L+   P AS L +
Subjt:  ISSSLNVLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGEGAVSVCLLGFLDNVKLPLSPTTPFASLLVV

Query:  GDLNAAATFSN
        GD   A T SN
Subjt:  GDLNAAATFSN

A0A4S8K171 Uncharacterized protein1.5e-1057.14Show/hide
Query:  LRISSSLNVLESA-ISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGE-GAVSVCLLGFLDNVKLP
        L +SSSL  L SA +SSGG+VKPV E +KP+LALEALL+AAPL  SSKSSFSC L DFL+      P   PGE   V    L FLD +  P
Subjt:  LRISSSLNVLESA-ISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKSSFSCALLDFLICVFRPLPLPHPGE-GAVSVCLLGFLDNVKLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGAAGCACGTTACTTGTACAAAGAATCCACCGGCAAGCATGAAGGTCATGACGGTGACCGAGGCTAAAGTCGTGGCCTTCTTGACATCCATGAGTGTAGCTCC
AATAGCCAAGCCAAGGCCCTATATGATGAAACAACTCATTCAAACCACTCCTCCAAGCAAACCCAATGAGCTCAATCCGAAGAAGAAGAAGATGGCATACCTGAGCAGCC
ACTATGCAGAGGAAGACAGTGACCATGTATCGAATATTGTTCCCACCAGCTCGCTCCCCATTGCCTTTTCGAAGACTTCACCTTCGATTTCAGCTCTTCGTCGAGCATTA
GAGGTGCGAGCATCTTCCTCTTTTCCTTCTCTGCAACCCTCGTCTCGTAAGCCTCCACAAGATACTGCTTCACATTATTGCATTCCAATCAAATCATCGTCGTTCATTTT
CAGTGCGCATTATTGCAGATTAAGTTTCCCTTCCCAAGAAGAATTAGCTTGTCGAAGTTGTGGAATAGTCTGCTTGATGGTTGGTGAATCGTTGTCACCACGGTCTTCCC
AGCCTGCCATGGAAGAACACATTAATCATTCTATGTTGGAGCTAATCAGCCAAGGAAAAAAACCCGACGCCTTTCTCCACCCGAAACCCCACGGACGAAGGAGCCACCAA
TCATTGTATCCTGGCACCTGCAGGAGGATCTATATTGGTGAGTGCCTATTCCAGAAGAATGTAATTGAACCACCAACTGTAGATCGTATGAGCCGCCCTCCGAGCAGATT
GAGTAATGTTGTCTTGCCACTTCCAGAAGGTCCCATTAAGGCCAGAACTTCGCCTGGGTGTACCAAACCGAATTACTTACGTATATCTTCATCACTAAATGTCTTGGAAT
CAGCAATTTCATCAGGTGGCAGTGTGAAGCCAGTGAAGGAGAATGACAAGCCCAAGCTAGCACTTGAAGCTCTACTCAGGGCTGCACCACTGCCCAAGTCATCCAAATCC
AGCTTCAGTTGTGCACTCCTAGACTTCCTGATATGTGTGTTTCGACCACTGCCACTGCCACACCCCGGCGAAGGAGCTGTCAGCGTCTGCTTGCTCGGCTTCCTCGACAA
CGTCAAGCTACCACTCTCCCCCACCACCCCATTTGCCTCTCTGCTCGTCGTCGGTGACTTGAATGCTGCTGCCACCTTCTCCAACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGAAGCACGTTACTTGTACAAAGAATCCACCGGCAAGCATGAAGGTCATGACGGTGACCGAGGCTAAAGTCGTGGCCTTCTTGACATCCATGAGTGTAGCTCC
AATAGCCAAGCCAAGGCCCTATATGATGAAACAACTCATTCAAACCACTCCTCCAAGCAAACCCAATGAGCTCAATCCGAAGAAGAAGAAGATGGCATACCTGAGCAGCC
ACTATGCAGAGGAAGACAGTGACCATGTATCGAATATTGTTCCCACCAGCTCGCTCCCCATTGCCTTTTCGAAGACTTCACCTTCGATTTCAGCTCTTCGTCGAGCATTA
GAGGTGCGAGCATCTTCCTCTTTTCCTTCTCTGCAACCCTCGTCTCGTAAGCCTCCACAAGATACTGCTTCACATTATTGCATTCCAATCAAATCATCGTCGTTCATTTT
CAGTGCGCATTATTGCAGATTAAGTTTCCCTTCCCAAGAAGAATTAGCTTGTCGAAGTTGTGGAATAGTCTGCTTGATGGTTGGTGAATCGTTGTCACCACGGTCTTCCC
AGCCTGCCATGGAAGAACACATTAATCATTCTATGTTGGAGCTAATCAGCCAAGGAAAAAAACCCGACGCCTTTCTCCACCCGAAACCCCACGGACGAAGGAGCCACCAA
TCATTGTATCCTGGCACCTGCAGGAGGATCTATATTGGTGAGTGCCTATTCCAGAAGAATGTAATTGAACCACCAACTGTAGATCGTATGAGCCGCCCTCCGAGCAGATT
GAGTAATGTTGTCTTGCCACTTCCAGAAGGTCCCATTAAGGCCAGAACTTCGCCTGGGTGTACCAAACCGAATTACTTACGTATATCTTCATCACTAAATGTCTTGGAAT
CAGCAATTTCATCAGGTGGCAGTGTGAAGCCAGTGAAGGAGAATGACAAGCCCAAGCTAGCACTTGAAGCTCTACTCAGGGCTGCACCACTGCCCAAGTCATCCAAATCC
AGCTTCAGTTGTGCACTCCTAGACTTCCTGATATGTGTGTTTCGACCACTGCCACTGCCACACCCCGGCGAAGGAGCTGTCAGCGTCTGCTTGCTCGGCTTCCTCGACAA
CGTCAAGCTACCACTCTCCCCCACCACCCCATTTGCCTCTCTGCTCGTCGTCGGTGACTTGAATGCTGCTGCCACCTTCTCCAACAGTTGA
Protein sequenceShow/hide protein sequence
MKEKHVTCTKNPPASMKVMTVTEAKVVAFLTSMSVAPIAKPRPYMMKQLIQTTPPSKPNELNPKKKKMAYLSSHYAEEDSDHVSNIVPTSSLPIAFSKTSPSISALRRAL
EVRASSSFPSLQPSSRKPPQDTASHYCIPIKSSSFIFSAHYCRLSFPSQEELACRSCGIVCLMVGESLSPRSSQPAMEEHINHSMLELISQGKKPDAFLHPKPHGRRSHQ
SLYPGTCRRIYIGECLFQKNVIEPPTVDRMSRPPSRLSNVVLPLPEGPIKARTSPGCTKPNYLRISSSLNVLESAISSGGSVKPVKENDKPKLALEALLRAAPLPKSSKS
SFSCALLDFLICVFRPLPLPHPGEGAVSVCLLGFLDNVKLPLSPTTPFASLLVVGDLNAAATFSNS