; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G005790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G005790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDetected protein of confused Function
Genome locationCmo_Chr06:2842399..2845117
RNA-Seq ExpressionCmoCh06G005790
SyntenyCmoCh06G005790
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0010431 - seed maturation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596664.1 hypothetical protein SDJN03_09844, partial [Cucurbita argyrosperma subsp. sororia]3.9e-7988.24Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDP+TSEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRF QLTVTSYYATSSASHYGVSLLTRRIEDNHT+RTR Q
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

XP_022945082.1 uncharacterized protein LOC111449402 [Cucurbita moschata]1.4e-8191.18Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

XP_023005917.1 uncharacterized protein LOC111498779 [Cucurbita maxima]2.5e-7887.06Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDPDTSEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPF+IGVPVLLLCSGAGAAFGGF LPRFTQLTVTSYYATSSASHYGVSLLTRRIE+NH +RTR Q
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

XP_023538973.1 uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo]1.3e-7988.82Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDPD SEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHT+RTR Q
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

XP_038904167.1 uncharacterized protein LOC120090522 [Benincasa hispida]1.2e-7585.12Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYE+KLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDPD SEWAINPVLH  TAV               AGSGLGGLLSAVHA+NTGIPHLQ+HV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRF QLTVTSYYATSSASHYGVSLLTRRIEDNHT+RT+
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR

TrEMBL top hitse value%identityAlignment
A0A0A0LEC4 Uncharacterized protein2.8e-7585.03Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDPD SEWAINPVLH  TAV               AGSGLGGLLSAVHA+NTGIPHLQ+HV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTART
        KGPKWLPFVIGVP LLLCS AGA FGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHT+RT
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTART

A0A1S3B6K8 uncharacterized protein LOC1034867425.0e-7280.95Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLR GNLYHEPTMNPGLGSPRCPRCFSLL+PDPD SEWA+NPVLH  TAV               AGSGLGGLLSAVHA+NTGIPHL ++V
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR
        KGPKWLPFVIGVP LLLCS AGA FGGF LPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHT++T+
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR

A0A6J1DD33 uncharacterized protein LOC1110193744.5e-7382.14Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYE+KLRRGNLYHEPTMNPGLGSPRCPRCFSLL  DPD SEWAINPVLH  TAV               AGSGLGG+LSAVHAFNTGIP LQ+HV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALP+F QLTVTSYYATSSASHYGVSLLTR+IE+NHT+RT+
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR

A0A6J1FZY6 uncharacterized protein LOC1114494026.9e-8291.18Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

A0A6J1L0N8 uncharacterized protein LOC1114987791.2e-7887.06Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLL+PDPDTSEWAINPVLHSTTAV               AGSGLGGLLSAVHAFNTGIPHLQNHV
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ
        KGPKWLPF+IGVPVLLLCSGAGAAFGGF LPRFTQLTVTSYYATSSASHYGVSLLTRRIE+NH +RTR Q
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein3.6e-5965.48Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTR+VYE+KLRRGNL ++PTMNPGLGS RCPRC SLL P+ +  EW I PVLH   AV               AGSG+GGLLSAVHAFNTGIP+LQN  
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR
         G K L F++GVP+LL+ SG GAAFGG+ALP+F QLTVTSYYA+SSASHYG+S+LTRRIE+ H +RT+
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR

AT2G41945.2 unknown protein3.6e-5965.48Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTR+VYE+KLRRGNL ++PTMNPGLGS RCPRC SLL P+ +  EW I PVLH   AV               AGSG+GGLLSAVHAFNTGIP+LQN  
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR
         G K L F++GVP+LL+ SG GAAFGG+ALP+F QLTVTSYYA+SSASHYG+S+LTRRIE+ H +RT+
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTR

AT2G41945.3 unknown protein1.7e-5353.4Show/hide
Query:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV
        MGTR+VYE+KLRRGNL ++PTMNPGLGS RCPRC SLL P+ +  EW I PVLH   AV               AGSG+GGLLSAVHAFNTGIP+LQN  
Subjt:  MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHV

Query:  KGPKWLPFVIGVPVLLLCSGAGAAFG--------------------------------------GFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDN
         G K L F++GVP+LL+ SG GAAFG                                      G+ALP+F QLTVTSYYA+SSASHYG+S+LTRRIE+ 
Subjt:  KGPKWLPFVIGVPVLLLCSGAGAAFG--------------------------------------GFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDN

Query:  HTARTR
        H +RT+
Subjt:  HTARTR

AT3G04040.1 unknown protein7.4e-1231.93Show/hide
Query:  RCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFA
        RC  C   L  + +T+EW + P +  +            +SM+   GS +GG  SA   F+  +P ++  +KGP WL F++G P +++ S A A   G A
Subjt:  RCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFA

Query:  LPRFTQLTVTSYYATSSAS
        +P   QL  +SY+A   +S
Subjt:  LPRFTQLTVTSYYATSSAS

AT5G18250.1 unknown protein5.7e-1231.93Show/hide
Query:  RCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFA
        RC  C   L  + +TS+W ++P +  +            +SM+   GS +GG  SA   FN  +P ++  +KGP WL F++G P +++ S A A   G  
Subjt:  RCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVIGVPVLLLCSGAGAAFGGFA

Query:  LPRFTQLTVTSYYATSSAS
        +P   QL  +SY A   +S
Subjt:  LPRFTQLTVTSYYATSSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACAAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGCAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCCCCTCGTTGCCCTCGCTGTTTCTCTCT
TCTTCAACCCGATCCTGATACAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGTTTTTGATTCTCCAGCGATGAATTTGTACTCTATGTTGTGTT
CTGCAGGATCAGGTCTTGGTGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTGTAATT
GGGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGC
TTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGACAATCACACGGCTCGAACTCGGGTTCAATGA
mRNA sequenceShow/hide mRNA sequence
GATTTGGCCCAATTTTGTCTGTTCCACTCATAACTCAAAACCTAAGACTAAACCGGAGAATTTGCTGCGGAACCAAACGAAAATCTTCCGAGCCAGTTTCAATCCACTAT
GGGCACAAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGCAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCCCCTCGTTGCCCTCGCTGTTTCTCTCTTC
TTCAACCCGATCCTGATACAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGTTTTTGATTCTCCAGCGATGAATTTGTACTCTATGTTGTGTTCT
GCAGGATCAGGTCTTGGTGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTGTAATTGG
GGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGCTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTT
CCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGACAATCACACGGCTCGAACTCGGGTTCAATGATTTTCACAGGTCACATAATTTCAAGTAAGCAATCTCCTT
TCCTTTTCCCTTTTTTCTGCTGGAAATTTTGCAAAATCATGTTTTTCTGTAGATTTAGAACGTCTGATTTGTGCTTGCTTTTGGTAAGACACCTTATCATATATGTAAAT
TGCAGAGAGTATCCGTTTAGATACATAATGTGCAAATAATCATAACGTTATTGATTACAGTTGTGCGACTTCCAGCCATCAAGGCTGTTGAGAATTTTGTATAATGTTAT
TGACGATCATGAAAATTTACTGCGGTAATGCTATATATATGTAGTAGTTTATTGAAAGCCATTTCTGCAAACGGTGA
Protein sequenceShow/hide protein sequence
MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLQPDPDTSEWAINPVLHSTTAVVFDSPAMNLYSMLCSAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFVI
GVPVLLLCSGAGAAFGGFALPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTARTRVQ