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CmoCh06G006020 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006020
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein-tyrosine-phosphatase PTP1
Genome locationCmo_Chr06:2968312..2968939
RNA-Seq ExpressionCmoCh06G006020
SyntenyCmoCh06G006020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592235.1 Protein-tyrosine-phosphatase PTP1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0584.85Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+AQRI ASDM++NCSVAL NVNISKNRYTDVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

KAG6596688.1 hypothetical protein SDJN03_09868, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1397.73Show/hide
Query:  SRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDVLTL
        SRIQLLPEFLKAQR AASDMRRNCSVALGNVNISKNRYTDVLTL
Subjt:  SRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDVLTL

KAG7020974.1 Protein-tyrosine-phosphatase PTP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0584.85Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+AQRI ASDM++NCSVAL NVNISKNRYTDVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

KAG7028222.1 hypothetical protein SDJN02_09402, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-3096.05Show/hide
Query:  MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDVLTL
        MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTD++ L
Subjt:  MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDVLTL

XP_022932558.1 protein-tyrosine-phosphatase PTP1 [Cucurbita moschata]2.0e-0584.85Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+AQRI ASDM++NCSVAL NVNISKNRYTDVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

TrEMBL top hitse value%identityAlignment
A0A1S3C081 protein-tyrosine-phosphatase PTP1 isoform X13.2e-0475.76Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+A+RI ASDMRR+CSVAL NVN++KNRY DVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

A0A1S4E3A2 protein-tyrosine-phosphatase PTP1-like isoform X13.2e-0475.76Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+A+RI ASDMRR+CSVAL NVN++KNRY DVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

A0A5D3CEC2 Protein-tyrosine-phosphatase PTP1-like isoform X43.2e-0475.76Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+A+RI ASDMRR+CSVAL NVN++KNRY DVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

A0A6J1F227 protein-tyrosine-phosphatase PTP19.9e-0684.85Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+AQRI ASDM++NCSVAL NVNISKNRYTDVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

A0A6J1IKU0 protein-tyrosine-phosphatase PTP19.9e-0684.85Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL
        L+AQRI ASDM++NCSVAL NVNISKNRYTDVL
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAATTTCCGGTTTCCGCCATTGTTAGTTACCGATCAATTACTTTCTACCATGACAAAATCTGTTGGAACGGGAAGCAAGTCGACGATCCTAATGCAATCG
ATTTGGACATTGACAAGCAATTCCTTGGCCTTCCTCTATCAAGTCAGCCGTATTCAACTTCTTCCTGAATTTTTGAAGGCCCAGAGAATAGCTGCATCGGATATG
AGGAGAAATTGCTCTGTGGCTCTTGGCAATGTCAACATCAGTAAAAATCGTTACACGGATGTATTAACCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAATTTCCGGTTTCCGCCATTGTTAGTTACCGATCAATTACTTTCTACCATGACAAAATCTGTTGGAACGGGAAGCAAGTCGACGATCCTAATGCAATCG
ATTTGGACATTGACAAGCAATTCCTTGGCCTTCCTCTATCAAGTCAGCCGTATTCAACTTCTTCCTGAATTTTTGAAGGCCCAGAGAATAGCTGCATCGGATATG
AGGAGAAATTGCTCTGTGGCTCTTGGCAATGTCAACATCAGTAAAAATCGTTACACGGATGTATTAACCCTTTGA
Protein sequenceShow/hide protein sequence
MLNFRFPPLLVTDQLLSTMTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDVLTL