; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G006060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCmo_Chr06:2982870..2987080
RNA-Seq ExpressionCmoCh06G006060
SyntenyCmoCh06G006060
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596692.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-15398.98Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHAS+LSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLM TPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

KAG7028226.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-15398.98Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHAS+LSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALK SRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

XP_022937184.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita moschata]2.0e-155100Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

XP_023005152.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita maxima]9.5e-15096.26Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHAS+L  PN HGKSSVFYPKRKSSLSFPSSSSVLKATALKP R LAPPCSVLMTTPQTPDSAR+GAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        F+ADAIISQLLLLDAQDS+KDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+IRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

XP_023540498.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo]5.0e-15196.94Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHAS+L LPN HGKSSVFYPK KSSLSFPSSSSVLKATALKPSRTLAPPCSVLMT PQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDS+KDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+IRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

TrEMBL top hitse value%identityAlignment
A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit6.9e-13888.78Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTL+P AS+L LPNSHGK S F+PK KS+LSFPS+SSVLK TALKPSRTL PPCSV MT PQTPD++R GAETDAMGLLLRERIVFLGN+IDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS+GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+ RIIS +TGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID+D+IIPL+ +PERVKATLNYEE+SKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit3.3e-14090.48Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTL+PHAS+LSLPNSH K S FYPK KSSLSFPS+ SVLKATALKPSRTLA PCSVLMT PQTPD AR GAETDAMGLLLRERIVFLGN+IDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINS GGSLSATMAI DV+QLVRADVSTI LGIAASTASIILGGGTKGKR AMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+ RIIS +TGHPF+KVQKDIDRDRYMSPIEAVEYGLIDGVIDKD+IIPLM +PERVKA+LNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit3.8e-13688.78Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTL+PHAS+L L NSHGK S FYPK KSSLSFPS+SSVLK TA KPSRTLA  CSV MT PQTPD+A+ GAETDAMGLLLRERIVFLGN+IDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNI RIIS +TGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD+IIPL+ +PERVKA+LNY EISKDP+KFL+PDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1FAG6 ATP-dependent Clp protease proteolytic subunit9.6e-156100Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

A0A6J1KSC7 ATP-dependent Clp protease proteolytic subunit4.6e-15096.26Show/hide
Query:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD
        MELLSRCSTLVPHAS+L  PN HGKSSVFYPKRKSSLSFPSSSSVLKATALKP R LAPPCSVLMTTPQTPDSAR+GAETDAMGLLLRERIVFLGNNIDD
Subjt:  MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDD

Query:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI
        F+ADAIISQLLLLDAQDS+KDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEI

Query:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        QAREIMHNKNN+IRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
Subjt:  QAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 22.8e-5154.59Show/hide
Query:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG
        S R     D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAI D +Q V  DV+TI  G+AAS  + +L GG +G
Subjt:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG

Query:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTI
        KR A+P+ARIM+HQPLGG  GQA+D+EIQAREI+++K+ +  +++ +TG P EK++ D DRD +MSP EA  YGLID V+ + T+
Subjt:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTI

Q3ANI8 ATP-dependent Clp protease proteolytic subunit 15.6e-5254.7Show/hide
Query:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG
        S R     D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AI D +Q V  DV TI  G+AAS  + +L GGTKG
Subjt:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG

Query:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
        KR A+PNARIM+HQPLGG  GQA+D+EIQA+EI++ K  +  +++ +TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 21.2e-5154.14Show/hide
Query:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG
        S R     D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++NS GGS++A +AI D +Q V  DV TI  G+AAS  + +L GGTKG
Subjt:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG

Query:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID
        KR A+PNARIM+HQPLGG  GQA+D+EIQA+EI+  K  +  +++ +TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 32.8e-5154.59Show/hide
Query:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG
        S R     D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAI D +Q V  DV+TI  G+AAS  + +L GG +G
Subjt:  SARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKG

Query:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTI
        KR A+P+ARIM+HQPLGG  GQA+D+EIQAREI+++K+ +  +++ +TG P EK++ D DRD +MSP EA  YGLID V+ + T+
Subjt:  KRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTI

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic2.0e-9769.18Show/hide
Query:  TLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKAT--ALKPSRTLAPPCSVLMTTP-----------QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFV
        TLSL +S   S V    R +S S  SSSS  K     LKP++ ++PP      +P           QT +SA  GAE+D MGLLLRERIVFLG++IDDFV
Subjt:  TLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKAT--ALKPSRTLAPPCSVLMTTP-----------QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFV

Query:  ADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQA
        ADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILG GTKGKRFAMPN RIM+HQPLGG SGQAIDVEIQA
Subjt:  ADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQA

Query:  REIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        +E+MHNKNN+  II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID D+IIPL  +P+RVK  +NYEEISKDP KFLTP++PDDEIY
Subjt:  REIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.5e-4451.5Show/hide
Query:  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVH
        L + RI+  G  +DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI D ++ +R DVST+ +G+AAS  + +L  GTKGKR+++PN+RIM+H
Subjt:  LLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVH

Query:  QPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI
        QPLGG  G   D++IQA E++H+K N+   ++ +TG   EK+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 61.0e-3740.96Show/hide
Query:  PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILG
        P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N  GGS  + +AI D +  ++  V T+A G+AAS  +++L 
Subjt:  PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILG

Query:  GGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
        GG KG R+AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ + +TG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  GGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G11750.2 CLP protease proteolytic subunit 62.0e-3636.55Show/hide
Query:  KSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTT----------------PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQD
        K+ LS   S S +K     PS    P  ++L ++                P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D
Subjt:  KSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTT----------------PQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQD

Query:  STKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIIS
           DI +++N  GGS  + +AI D +  ++  V T+A G+AAS  +++L GG KG R+AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ +
Subjt:  STKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIIS

Query:  NYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD
         +TG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  NYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKD

AT1G66670.1 CLP protease proteolytic subunit 33.5e-4946.26Show/hide
Query:  PKRKSSLSFPSSSSVLKATALKPSRTLAPPCSV----LMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFI
        PK        SS S+ K     P +TL+    V    + +  Q+P    +  E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFI
Subjt:  PKRKSSLSFPSSSSVLKATALKPSRTLAPPCSV----LMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTKDIRLFI

Query:  NSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEK
        NS GGS++A M I D ++  +ADVST+ LG+AAS  + +L  G+KGKR+ MPN+++M+HQPLG   G+A ++ I+ RE+M++K  + +I S  TG P  +
Subjt:  NSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEK

Query:  VQKDIDRDRYMSPIEAVEYGLIDGVID
        ++ D DRD +++P EA EYGLID VID
Subjt:  VQKDIDRDRYMSPIEAVEYGLIDGVID

AT5G45390.1 CLP protease P41.4e-9869.18Show/hide
Query:  TLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKAT--ALKPSRTLAPPCSVLMTTP-----------QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFV
        TLSL +S   S V    R +S S  SSSS  K     LKP++ ++PP      +P           QT +SA  GAE+D MGLLLRERIVFLG++IDDFV
Subjt:  TLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKAT--ALKPSRTLAPPCSVLMTTP-----------QTPDSARTGAETDAMGLLLRERIVFLGNNIDDFV

Query:  ADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQA
        ADAI+SQLLLLDA+D  KDI+LFINS GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILG GTKGKRFAMPN RIM+HQPLGG SGQAIDVEIQA
Subjt:  ADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQA

Query:  REIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY
        +E+MHNKNN+  II+  T   FE+V KDIDRDRYMSPIEAVEYGLIDGVID D+IIPL  +P+RVK  +NYEEISKDP KFLTP++PDDEIY
Subjt:  REIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGGTGTTCTACTCTTGTTCCTCACGCCTCCACTCTCAGTCTTCCGAATTCTCATGGAAAATCTTCGGTTTTCTATCCCAAACGCAAATCCAGCCT
CTCATTTCCTTCGTCTTCATCAGTCCTCAAAGCAACCGCTCTTAAACCCTCCAGAACCCTAGCTCCGCCGTGCTCTGTCCTTATGACGACTCCACAGACGCCGGATTCCG
CCCGGACTGGCGCCGAGACTGATGCCATGGGACTGCTTCTCAGAGAGAGGATCGTTTTCTTGGGGAACAACATTGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTC
TTACTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATTAATTCCTCCGGCGGCTCTCTGAGTGCTACAATGGCTATCATCGACGTCTTACAGCTTGTGAG
AGCTGATGTCTCCACAATTGCACTGGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTTTCGCAATGCCTAATGCACGTATCATGG
TTCATCAACCTCTTGGAGGGACGAGTGGCCAAGCAATAGATGTCGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATAATCAGAATTATCTCCAACTACACT
GGCCATCCATTTGAGAAGGTCCAAAAAGATATCGATCGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAAGACACCAT
TATACCTCTCATGCAACTGCCAGAAAGAGTGAAGGCAACGTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCCGATGACGAGATAT
ACTAG
mRNA sequenceShow/hide mRNA sequence
AAGTCGTCATCTCTCTGCTTCTTCCTGGTTTCAGAGTTGAAGCAGAGCAGAGCTGTAAATCCATGGAGCTTCTTTCACGGTGTTCTACTCTTGTTCCTCACGCCTCCACT
CTCAGTCTTCCGAATTCTCATGGAAAATCTTCGGTTTTCTATCCCAAACGCAAATCCAGCCTCTCATTTCCTTCGTCTTCATCAGTCCTCAAAGCAACCGCTCTTAAACC
CTCCAGAACCCTAGCTCCGCCGTGCTCTGTCCTTATGACGACTCCACAGACGCCGGATTCCGCCCGGACTGGCGCCGAGACTGATGCCATGGGACTGCTTCTCAGAGAGA
GGATCGTTTTCTTGGGGAACAACATTGATGACTTTGTGGCCGATGCTATTATCAGCCAGCTCTTACTCTTGGATGCTCAGGATTCTACTAAGGATATCAGACTCTTCATT
AATTCCTCCGGCGGCTCTCTGAGTGCTACAATGGCTATCATCGACGTCTTACAGCTTGTGAGAGCTGATGTCTCCACAATTGCACTGGGCATTGCAGCCTCAACAGCTTC
CATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTTTCGCAATGCCTAATGCACGTATCATGGTTCATCAACCTCTTGGAGGGACGAGTGGCCAAGCAATAGATGTCGAAA
TTCAAGCACGTGAAATCATGCATAACAAGAACAACATAATCAGAATTATCTCCAACTACACTGGCCATCCATTTGAGAAGGTCCAAAAAGATATCGATCGGGATCGTTAT
ATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAAGACACCATTATACCTCTCATGCAACTGCCAGAAAGAGTGAAGGCAACGTTAAATTA
TGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGACGTCCCCGATGACGAGATATACTAGTTTCGGGTGTTTCGATGAACCGTTCTCTAGGCTTTTGATTTAC
ATGATTCACTTGTAGAATCTTGATTCAGCAAAGTCATGGTAAGTGGAAAATCGAAACTCGATGATGTGCTACTCAGCTTTTCGAGTATCGTTTTTGAACAAAACGTCTCT
ACTTACTAGATGTTAGAGGTCACGGGAATTTGGACTCCTTTTTTGTCCATGACATTTTCAAATGAGCATTCTGAGAAAAGAAAAATTGGCAGAGTATATTTCATAGCTTT
GTTTGATTAATTTCTTCTCCGTCCCAAACAGAACTGTTTAGTGTCAATAAACTGAATTTCTTGTTGAATTTCAGGACTTCCATTTTATAGTTTGACTCAGAG
Protein sequenceShow/hide protein sequence
MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPPCSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQL
LLLDAQDSTKDIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNARIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYT
GHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY