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CmoCh06G006470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:3252844..3254347
RNA-Seq ExpressionCmoCh06G006470
SyntenyCmoCh06G006470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596727.1 hypothetical protein SDJN03_09907, partial [Cucurbita argyrosperma subsp. sororia]1.1e-57100Show/hide
Query:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
Subjt:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        SCITVA
Subjt:  SCITVA

XP_022924877.1 uncharacterized protein LOC111432244 [Cucurbita moschata]1.1e-57100Show/hide
Query:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
Subjt:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        SCITVA
Subjt:  SCITVA

XP_023005604.1 uncharacterized protein LOC111498543 [Cucurbita maxima]4.4e-5697.17Show/hide
Query:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSC+ISKIEGPQD K FAKCAGDC
Subjt:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        SCITVA
Subjt:  SCITVA

XP_023540550.1 uncharacterized protein LOC111800878 isoform X1 [Cucurbita pepo subsp. pepo]2.2e-5599.03Show/hide
Query:  GEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI
        G KGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI
Subjt:  GEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI

Query:  TVA
        TVA
Subjt:  TVA

XP_023540551.1 uncharacterized protein LOC111800878 isoform X2 [Cucurbita pepo subsp. pepo]2.2e-5599.03Show/hide
Query:  GEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI
        G KGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI
Subjt:  GEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCI

Query:  TVA
        TVA
Subjt:  TVA

TrEMBL top hitse value%identityAlignment
A0A251P3A8 Uncharacterized protein1.8e-2652.83Show/hide
Query:  SGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCII--EGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        +G    + KA+C+CGEGWKC I RT+GPDAGK F NCG+NC C+I  +GT    V  Q++   G  E A CECGEGW C ISK+EGP   K F++C+  C
Subjt:  SGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCII--EGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        +C+T A
Subjt:  SCITVA

A0A6J1CV46 uncharacterized protein LOC1110148579.3e-4485.71Show/hide
Query:  LGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCITVA
        +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE    TKSFAKCAGDCSCIT+A
Subjt:  LGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDCSCITVA

A0A6J1EA88 uncharacterized protein LOC1114322445.1e-58100Show/hide
Query:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
Subjt:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        SCITVA
Subjt:  SCITVA

A0A6J1KZQ8 uncharacterized protein LOC1114985432.1e-5697.17Show/hide
Query:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSC+ISKIEGPQD K FAKCAGDC
Subjt:  VGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        SCITVA
Subjt:  SCITVA

A0A6J5X755 Uncharacterized protein1.4e-2652.83Show/hide
Query:  SGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCII--EGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC
        +G    + KA+C+CGEGWKC I RT+GPDAGK F NCG+NC C+I  +GT    V  Q++   G  E A CECGEGW C ISK+EGP   K F++C+  C
Subjt:  SGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCII--EGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTKSFAKCAGDC

Query:  SCITVA
        +C+T A
Subjt:  SCITVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAGATTCCGATTAAGATTTGGAATGGTAGATTTAAGATATTTTGTCCCTGTGTGGGGAGTGGAGAAAAGGGAGTGCTTGGGAAGGCATATTGCAAATGTGGGGA
AGGTTGGAAATGCGAGATCAAAAGAACTCAAGGCCCTGATGCAGGGAAGACCTTTGTCAATTGTGGCAACAACTGCGTCTGCATAATCGAAGGGACAGCCGAAGGAGCAG
TCAAGTTGCAGCAATTGGCCGGCGAGGGCGGCTTTGAAGGAGCCTCTTGCGAGTGTGGAGAAGGTTGGAGCTGCACCATTTCCAAGATTGAAGGCCCTCAAGACACCAAG
TCCTTTGCTAAATGTGCTGGTGATTGTTCTTGCATCACTGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAGATTCCGATTAAGATTTGGAATGGTAGATTTAAGATATTTTGTCCCTGTGTGGGGAGTGGAGAAAAGGGAGTGCTTGGGAAGGCATATTGCAAATGTGGGGA
AGGTTGGAAATGCGAGATCAAAAGAACTCAAGGCCCTGATGCAGGGAAGACCTTTGTCAATTGTGGCAACAACTGCGTCTGCATAATCGAAGGGACAGCCGAAGGAGCAG
TCAAGTTGCAGCAATTGGCCGGCGAGGGCGGCTTTGAAGGAGCCTCTTGCGAGTGTGGAGAAGGTTGGAGCTGCACCATTTCCAAGATTGAAGGCCCTCAAGACACCAAG
TCCTTTGCTAAATGTGCTGGTGATTGTTCTTGCATCACTGTTGCTTGATCGTGTCTTTATTCTCTCGTATATGTTTCAAACTAGACCGACTTTCTTCATTTGGGTTTGTG
TCTGTTTAATTGTTGTTCATGTAAACATATTCTCGTGTATGAAAGTTAATGACCGAAAATAAGATCTACTCGTAAAGACATTTTTAGTAGTTCAAAA
Protein sequenceShow/hide protein sequence
MLQIPIKIWNGRFKIFCPCVGSGEKGVLGKAYCKCGEGWKCEIKRTQGPDAGKTFVNCGNNCVCIIEGTAEGAVKLQQLAGEGGFEGASCECGEGWSCTISKIEGPQDTK
SFAKCAGDCSCITVA