; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G006580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:3321948..3322298
RNA-Seq ExpressionCmoCh06G006580
SyntenyCmoCh06G006580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577703.1 hypothetical protein SDJN03_25277, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2558.04Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLE-QHE-YFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS++D + QH+ Y++ Q +   RSWSGNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDSDKDLE-QHE-YFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREDK
        SFEDLRAIRE+K
Subjt:  SFEDLRAIREDK

XP_022952265.1 uncharacterized protein LOC111454968 [Cucurbita moschata]2.3e-59100Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREDKESSPNS
        EDLRAIREDKESSPNS
Subjt:  EDLRAIREDKESSPNS

XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]1.1e-2457.14Show/hide
Query:  MSLNCLSCQLFLQRSDS--DKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS  D D +   Y++ Q +   RSWSGNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDS--DKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREDK
        SFEDLRAIRE+K
Subjt:  SFEDLRAIREDK

XP_023539506.1 uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]3.4e-5898.28Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAP GHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREDKESSPNS
        EDLRAIRE+KESSPNS
Subjt:  EDLRAIREDKESSPNS

XP_038905810.1 uncharacterized protein LOC120091761 [Benincasa hispida]2.6e-2662.07Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLEQH---EYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRD
        MSLNCLSCQ+ LQR+DS++  +Q     Y +D+  S +RSWSGNLSFRP  R N  GFR   ENKVAP+ HRR     AV+FG  GKEPRL+RS+GMRRD
Subjt:  MSLNCLSCQLFLQRSDSDKDLEQH---EYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRD

Query:  WSFEDLRAIREDKESS
        WSFEDLR IRE++E S
Subjt:  WSFEDLRAIREDKESS

TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein4.0e-2560.16Show/hide
Query:  MSLNCLSCQLFLQRSDSD--KDLEQHEYFT-DQAKSPDRSWSGNLSFRPPTRQNSD----GFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAG
        MSLNCLSCQ+ LQR+DS+  +D +   Y+T D+  S +RSWSGNL  RP           GFR   +NKVAP+GHRR     AV+FG  GKEPRLIRS+G
Subjt:  MSLNCLSCQLFLQRSDSD--KDLEQHEYFT-DQAKSPDRSWSGNLSFRPPTRQNSD----GFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAG

Query:  MRRDWSFEDLRAIREDKESSPNS
        MRRDWSFEDLRAIRE+K+ SPNS
Subjt:  MRRDWSFEDLRAIREDKESSPNS

A0A1S3BJN6 uncharacterized protein LOC1034907831.7e-2360.83Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLE---QHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRR
        MSLNCLSCQL LQR+DS++  +   Q  Y +D+     RSWSGNLS     RQN  G FR   +NKVAP+ HRR     AV+FG  GKEPRL+RS+GMRR
Subjt:  MSLNCLSCQLFLQRSDSDKDLE---QHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRR

Query:  DWSFEDLRAIREDKESSPNS
        DWSFEDLR IRE+KE SPNS
Subjt:  DWSFEDLRAIREDKESSPNS

A0A5A7UAS3 Uncharacterized protein1.7e-2360.83Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLE---QHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRR
        MSLNCLSCQL LQR+DS++  +   Q  Y +D+     RSWSGNLS     RQN  G FR   +NKVAP+ HRR     AV+FG  GKEPRL+RS+GMRR
Subjt:  MSLNCLSCQLFLQRSDSDKDLE---QHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRR

Query:  DWSFEDLRAIREDKESSPNS
        DWSFEDLR IRE+KE SPNS
Subjt:  DWSFEDLRAIREDKESSPNS

A0A6J1GL99 uncharacterized protein LOC1114549681.1e-59100Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREDKESSPNS
        EDLRAIREDKESSPNS
Subjt:  EDLRAIREDKESSPNS

A0A6J1L834 uncharacterized protein LOC1115001865.3e-2557.14Show/hide
Query:  MSLNCLSCQLFLQRSDS--DKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS  D D +   Y++ Q +   RSWSGNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDS--DKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREDK
        SFEDLRAIRE+K
Subjt:  SFEDLRAIREDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein5.1e-1242.99Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNL---SFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRD
        MSLNCL+C + LQR+DSD+D+   +         D S+  N    +F    R  S    VR  NK    GHRRL+S   + + G   EP+L+RS+G+RRD
Subjt:  MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNL---SFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRD

Query:  WSFEDLR
        WSFEDL+
Subjt:  WSFEDLR

AT5G46770.1 unknown protein9.9e-0838.02Show/hide
Query:  MSLNCLSCQLFLQRSDSDKDLE-------QHEYFTDQAKS------PDRSWSGNLSFRPPTRQNSDGFRVRTE-NKVAPMGHRRLHS-TGAVAFGGPGK-
        MSLNCLSCQ  L R+DS+KD++       + E      K+        R+WSGNLS R   +    G  +  +  KV  + H RL    G+     P + 
Subjt:  MSLNCLSCQLFLQRSDSDKDLE-------QHEYFTDQAKS------PDRSWSGNLSFRPPTRQNSDGFRVRTE-NKVAPMGHRRLHS-TGAVAFGGPGK-

Query:  -EPRLIRSAGMRRDWSFEDLR
         +P+L+RS G+RR+WSFE+LR
Subjt:  -EPRLIRSAGMRRDWSFEDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGAATTGCCTCTCCTGTCAACTCTTCTTGCAGAGATCGGACTCCGACAAAGACCTCGAGCAGCATGAATACTTCACCGATCAGGCCAAGTCGCCGGACAGAAG
CTGGTCGGGAAACCTGTCGTTTCGCCCTCCCACTCGCCAAAACAGCGACGGGTTTCGGGTCCGGACGGAGAATAAGGTGGCGCCGATGGGCCACCGCCGTCTTCACAGCA
CTGGCGCCGTAGCTTTCGGCGGCCCTGGTAAGGAGCCGAGGCTGATTAGAAGCGCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTTCGAGCCATCCGAGAGGATAAG
GAATCATCTCCCAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTGAATTGCCTCTCCTGTCAACTCTTCTTGCAGAGATCGGACTCCGACAAAGACCTCGAGCAGCATGAATACTTCACCGATCAGGCCAAGTCGCCGGACAGAAG
CTGGTCGGGAAACCTGTCGTTTCGCCCTCCCACTCGCCAAAACAGCGACGGGTTTCGGGTCCGGACGGAGAATAAGGTGGCGCCGATGGGCCACCGCCGTCTTCACAGCA
CTGGCGCCGTAGCTTTCGGCGGCCCTGGTAAGGAGCCGAGGCTGATTAGAAGCGCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTTCGAGCCATCCGAGAGGATAAG
GAATCATCTCCCAATTCCTAA
Protein sequenceShow/hide protein sequence
MSLNCLSCQLFLQRSDSDKDLEQHEYFTDQAKSPDRSWSGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGAVAFGGPGKEPRLIRSAGMRRDWSFEDLRAIREDK
ESSPNS