; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G006690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionScarecrow-like protein 5-like isoform X1
Genome locationCmo_Chr06:3380328..3382343
RNA-Seq ExpressionCmoCh06G006690
SyntenyCmoCh06G006690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596745.1 hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia]1.6e-6496.3Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASL-AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASL-AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

KAG7028282.1 hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5595.9Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASL-AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASL AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASL-AAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]1.3e-69100Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]7.1e-6898.51Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEALLPISTSPFRF PTAN SPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

XP_023540547.1 uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo]5.4e-6897.81Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPEC---GGFLPWQSWRRFFSG
        CGGSGLVLMDKDYFRCPEC   GGFLPWQSWRRFFSG
Subjt:  CGGSGLVLMDKDYFRCPEC---GGFLPWQSWRRFFSG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein1.9e-4272.79Show/hide
Query:  MEALL--PISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRC
        MEAL+  P+ T P        T P P + FPL  RSNS++ RRRTP FAAIDGASL    AD TQV+ITWQI VGAIAGVTPFVVAGIEFSKRI  QKRC
Subjt:  MEALL--PISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRC

Query:  KECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        KECGGSGLVL D DYFRCPECGGFLPWQSWRRFF G
Subjt:  KECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A1S3BLU9 uncharacterized protein LOC1034910511.6e-4185.29Show/hide
Query:  RSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFF
        RSNS++ RRRTP FAAIDGAS  + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRFF
Subjt:  RSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFF

Query:  SG
         G
Subjt:  SG

A0A6J1DN65 uncharacterized protein LOC1110221352.6e-3664.18Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEAL PIS S FRF     T P            NS+  RR   T AAI+ A+ +   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+E
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A6J1FBA7 uncharacterized protein LOC1114422626.2e-70100Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A6J1L2M2 uncharacterized protein LOC1114985373.4e-6898.51Show/hide
Query:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
        MEALLPISTSPFRF PTAN SPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE
Subjt:  MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKE

Query:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  CGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein1.2e-3369.15Show/hide
Query:  RRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        RR  T +A+  + LA   A+  + EITWQI+VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV  DK YFRCPECGGFLPWQSWRRFF+G
Subjt:  RRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTCCGATTCCCTCCCACAGCCAATACCAGCCCTCGTCCTGTTTCTCCTTTCCCCCTCAATCTGCGTTCAAATTCGCT
CAATAAGCGGAGACGAACGCCCACGTTTGCGGCCATTGATGGCGCTTCGCTTGCAGCAGCAGCAGCCGATCCCACTCAGGTTGAAATCACTTGGCAGATTGTCGTGGGAG
CGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCAGCAAGAGGATTGTGGCTCAGAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTTTGATGGAC
AAAGACTACTTCCGTTGCCCTGAATGCGGTGGTTTTTTGCCATGGCAGTCGTGGAGGCGATTCTTTTCGGGCTAA
mRNA sequenceShow/hide mRNA sequence
TGTGAAGTCTATGTTGAACGCAGAAGTCGAGTAGCCTGTGATTGCTGCCCGTGCTTGATCTCATAATCTCGCAATATGTTGCGGAGATCGATGACGAACCCCTTTGTGAA
TGGATGAGGTAGCAAACCCCTTCGTGAATAAATAATTTTTAAGAAGTGTCGGGTAATAGGGGGGCGGGCTTGACACCACAGGTGAAGTTGGTGGTTGGCTGGTAAATGCA
ACGTGTCCCAAACAGATCAACAAACTATTTCCTCTTTTATTCCCTTAATTTTCCCTCCTTTCTCCAACCGAACCATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTC
CGATTCCCTCCCACAGCCAATACCAGCCCTCGTCCTGTTTCTCCTTTCCCCCTCAATCTGCGTTCAAATTCGCTCAATAAGCGGAGACGAACGCCCACGTTTGCGGCCAT
TGATGGCGCTTCGCTTGCAGCAGCAGCAGCCGATCCCACTCAGGTTGAAATCACTTGGCAGATTGTCGTGGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAA
TCGAGTTCAGCAAGAGGATTGTGGCTCAGAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTTTGATGGACAAAGACTACTTCCGTTGCCCTGAATGCGGTGGTTTT
TTGCCATGGCAGTCGTGGAGGCGATTCTTTTCGGGCTAAAGAAGACAATCATTAGTACGTCTCTTTTAAAGCCCGGCCCTTTCGCTCTTTGTCACATGAGATGTGCAGAC
TCAAGCATGTTTGATTAGGATTAAGGGGACGTTGGAAAACAGAAATTGTAATCTCTGACTGATTTCCATTAGCATTATGTATGATAACGCATTCACAAATGTATCATTCT
TTTTTAGCAATCACG
Protein sequenceShow/hide protein sequence
MEALLPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMD
KDYFRCPECGGFLPWQSWRRFFSG