CuGenDBv2

Gene ID	CmoCh06G006750
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transducin/WD40 repeat-like superfamily protein
Genome location	Cmo_Chr06:3404665..3411193
RNA-Seq Expression	CmoCh06G006750
Synteny	CmoCh06G006750
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009522 - photosystem I (cellular component) GO:0009536 - plastid (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR000549 - Photosystem I PsaG/PsaK protein IPR001680 - WD40 repeat IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR017494 - Photosystem I PsaG, plant IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596751.1 hypothetical protein SDJN03_09931, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-235

93.02

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Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MSHYHGDDTDYMADEYEMEDIDDDMDDEY GREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLF+GVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

VVB00179.1 unnamed protein product [Arabis nemorensis]

1.4e-229

67.62

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Query:  MSHYHGDDTDYM-ADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE
        MS+Y GDD +YM                 + G +M  SDSD DEF+ S++KI DT+A QAR+G DIQGIPW+RLSITREKYR+TRLEQYKNYEN+PNSGE
Subjt:  MSHYHGDDTDYM-ADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE

Query:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD
         S K                             LRNLVWATSKHD YL+S + V H+S+L+  K EVLNV GHVAP+EKHPGSLLEGFT+TQVSTLAV+D
Subjt:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD

Query:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD
        K LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNA+EIY   SGA+HFTASNND GVRDFDME++QL  HFR+PWPVNH +L+PDGKLL IVGDNP+
Subjt:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD

Query:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE
        GLLVD  TGKT+ +L GH+DFSFASAWHPDG+TF+TGNQDKTCR+WD+RNLSKSVA L+GNLGAIRSIRY+SDG+YMAMAEPADF+HV+DV  GYE EQE
Subjt:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE

Query:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAA---------------ASSSAVFAASSFSASVGRQQPNPSTISYQGLRP
        IDFFGEISG+SFSPDTE+LF+GVWDRTYGSLLE+        L  L A+A                 + +SA+   S+FS ++   Q NP++IS+ GLRP
Subjt:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAA---------------ASSSAVFAASSFSASVGRQQPNPSTISYQGLRP

Query:  LP-GIKSSRSL----AGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV
        L  G  SS +L       K   S VV+AEL+P+VVISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDV
Subjt:  LP-GIKSSRSL----AGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV

Query:  LAWGSIGHIVAYYILATSSNGYDPKFF
        LAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  LAWGSIGHIVAYYILATSSNGYDPKFF

XP_022945249.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita moschata]

3.4e-236

93.47

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Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

XP_023005407.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita maxima]

1.6e-233

92.57

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Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MS+YHGDDTDYMADEYEMEDIDDDMDDEY GREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASL GHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLF+GVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

XP_023540466.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita pepo subsp. pepo]

2.2e-235

93.02

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Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MSHYHGDDTDYMADEYEMEDIDDDMDDEYH REMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLF+GVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

TrEMBL top hits

e value

%identity

Alignment

A0A565BEY9 WD_REPEATS_REGION domain-containing protein

6.7e-230

67.62

Show/hide

Query:  MSHYHGDDTDYM-ADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE
        MS+Y GDD +YM                 + G +M  SDSD DEF+ S++KI DT+A QAR+G DIQGIPW+RLSITREKYR+TRLEQYKNYEN+PNSGE
Subjt:  MSHYHGDDTDYM-ADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE

Query:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD
         S K                             LRNLVWATSKHD YL+S + V H+S+L+  K EVLNV GHVAP+EKHPGSLLEGFT+TQVSTLAV+D
Subjt:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD

Query:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD
        K LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNA+EIY   SGA+HFTASNND GVRDFDME++QL  HFR+PWPVNH +L+PDGKLL IVGDNP+
Subjt:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD

Query:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE
        GLLVD  TGKT+ +L GH+DFSFASAWHPDG+TF+TGNQDKTCR+WD+RNLSKSVA L+GNLGAIRSIRY+SDG+YMAMAEPADF+HV+DV  GYE EQE
Subjt:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE

Query:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAA---------------ASSSAVFAASSFSASVGRQQPNPSTISYQGLRP
        IDFFGEISG+SFSPDTE+LF+GVWDRTYGSLLE+        L  L A+A                 + +SA+   S+FS ++   Q NP++IS+ GLRP
Subjt:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAA---------------ASSSAVFAASSFSASVGRQQPNPSTISYQGLRP

Query:  LP-GIKSSRSL----AGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV
        L  G  SS +L       K   S VV+AEL+P+VVISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDV
Subjt:  LP-GIKSSRSL----AGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV

Query:  LAWGSIGHIVAYYILATSSNGYDPKFF
        LAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  LAWGSIGHIVAYYILATSSNGYDPKFF

A0A6A2YGS6 Photosystem I reaction center subunit V

1.1e-227

68.95

Show/hide

Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEG
        MSHY  DD +YM +EY+MEDI+DDMD+E+  R + GSDSD DE + S++KI DT+AAQARRG DIQGIPW+RLSITREKYR+TRLEQYKNYENI NSGE 
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEG

Query:  SEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDK
        S K                             LRNLVWATSKHD YL+SHFS+IHWSSL   K E+LNVSGHVAP+EKHP SL+EGFTQTQVSTLAVKDK
Subjt:  SEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDK

Query:  LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDG
        LLVAGGFQGELICKHLDRPG+SFCSRTTYDDNAITNAV+IY + SGAVHFTASNND GVRDFDMEK+QLS+HF F WPVNH +L+PDGKLL+IVGDNPD 
Subjt:  LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDG

Query:  LLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEI
        +LVDS TGKTV  L GHLD+SFASAWHPDG+TFATGNQDK+CRIWDVRNLS+SVA LKGNLGAIRSIRYSSDG+YMAMAEPADF+HV+D K+GYE EQEI
Subjt:  LLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEI

Query:  DFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAAA---SSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGV
        DFFGEISG+SFSPDTESLF+GVWDRTYGSLLEY RRRNYSYLDSL    +A+   +S++      FS +    +PN +  S+QGLRPL    SS+  +  
Subjt:  DFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAAA---SSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGV

Query:  KSPRSV----VVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYIL
         S R +     VKAEL+  VVISLST                                 AGD RAKEY SLLKSNDPVGFNIVDVLAWGSIGHIVAYYIL
Subjt:  KSPRSV----VVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYIL

Query:  ATSSNGYDPKFF
        ATSSNGYDPKFF
Subjt:  ATSSNGYDPKFF

A0A6J1EWF0 uncharacterized WD repeat-containing protein C2A9.03-like

1.7e-225

89.19

Show/hide

Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MS YHGDDTDYMADEYEMEDIDDDMDDEYH RE+EGSDSDADEF+SSS+IVDTTAAQARRG+DIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD L
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICK+LDRPGVSFCSRTTYDDNAITNAVEIY+SASGAVHFTASNNDSGVRDFDMEKFQLS+HF FPWPVNH ALNPDGKLLVIVGDNP+GL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVA L GHLDFSFASAWH DGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADF+HVFDVK+GYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLF+GVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

A0A6J1G0G9 uncharacterized WD repeat-containing protein C2A9.03-like

1.7e-236

93.47

Show/hide

Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

A0A6J1KT19 uncharacterized WD repeat-containing protein C2A9.03-like

7.7e-234

92.57

Show/hide

Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
        MS+YHGDDTDYMADEYEMEDIDDDMDDEY GREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGS

Query:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
        EK                             LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL
Subjt:  EK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKL

Query:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
        LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL
Subjt:  LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGL

Query:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
        LVDSQTGKTVASL GHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID
Subjt:  LVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEID

Query:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        FFGEISGVSFSPDTESLF+GVWDRTYGSLLEYHRRRNYSYLDSL
Subjt:  FFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

SwissProt top hits

e value

%identity

Alignment

P12357 Photosystem I reaction center subunit V, chloroplastic

1.0e-49

66.87

Show/hide

Query:  AMAAAASSSAVFAASSFSASVGRQQPNPSTI---SYQGLRPL----PGIKSSRSLAGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVS
        A A A+ SS + A  S      +QQ     +   S+ GLRPL        SS SL+   + RS+  +AEL+PS+VISLSTGLSLFLGRFVFFNFQREN++
Subjt:  AMAAAASSSAVFAASSFSASVGRQQPNPSTI---SYQGLRPL----PGIKSSRSLAGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVS

Query:  KQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        KQVPEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  KQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q00327 Photosystem I reaction center subunit V, chloroplastic

2.1e-47

75.59

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Query:  GLRPLPGIKSSRSLAGVKSP--RSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV
        GLR  P  +++ S  GV  P  RSV  +A L PSVVISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG THFEAGD RAKE+  +LKSNDPVGFN+VDV
Subjt:  GLRPLPGIKSSRSLAGVKSP--RSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDV

Query:  LAWGSIGHIVAYYILATSSNGYDPKFF
        LAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  LAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic

8.3e-52

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Query:  AASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGV----KSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ + ++FS ++  +  NP++IS+ GLRPL    SS +L  +    +   S VV+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGV----KSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic

3.2e-19

52.69

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Query:  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD
        N S +IS ST   L LGRFVF  FQR  VS+  +PEQNGV          + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Subjt:  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD

Q9Y7K5 Uncharacterized WD repeat-containing protein C2A9.03

2.9e-28

26.4

Show/hide

Query:  VDIQGIPWERLSI-TREKYRKTRLEQY------------------------------KNYENIPNSGEGSEKLRNLVWATSKHDAYLLSHFSVIHWSSLS
        VD QGIPW   +I  R+ +R  RL  Y                              + +   PN       L   V    +H    +S+ S+   ++L 
Subjt:  VDIQGIPWERLSI-TREKYRKTRLEQY------------------------------KNYENIPNSGEGSEKLRNLVWATSKHDAYLLSHFSVIHWSSLS

Query:  CTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVR
            +++++  ++               +  +S L   + +   G   G+  C    + G SF +R   DD+   N +++++       F    ND  V 
Subjt:  CTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVR

Query:  DFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGN
          D+++      +R    VN   L  +  L ++  D+ D +L+D ++    A L  H D     +WHP+G   ATG QD T ++WD+R L KS   L   
Subjt:  DFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGN

Query:  LGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEIDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHR
        + A+ ++ +S  G+ +A+ E ADF+ +FD K  +   Q IDFFGEI+G ++S   +SLF+GV D   G +LE+ R
Subjt:  LGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEIDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHR

Arabidopsis top hits

e value

%identity

Alignment

AT1G55680.1 Transducin/WD40 repeat-like superfamily protein

3.5e-186

71.62

Show/hide

Query:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEG
        MS+Y GDD +YM D  +  D +DD+D+++ G +M  SDSD DEF+ S++KI DT+A QAR+G DIQGIPW+RLSITRE YR+TRLEQYKNYEN+PNSGE 
Subjt:  MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEG

Query:  SEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDK
        S K                             LRNLVWATSKHD YL+S + V H+S+L+  K +VLNV GHV+P+EKHPGSLLEGFT+TQVSTLAV+DK
Subjt:  SEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDK

Query:  LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDG
         LVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNA+EIY   SGA+HFTASNND GVRDFDME++QL   FRFPWPVNH +L+PDGKLL IVGDNP+ 
Subjt:  LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDG

Query:  LLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEI
        LLVD  TGKT+A+L GHLDFSFASAWHPDG TF+TGNQDKTCR+WD+RNLSKSVA L+GNLGAIRSIRY+SDG+YMAMAEPADF+HV+DV  GYE EQEI
Subjt:  LLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEI

Query:  DFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS
        DFFGEISG+SFSPDTE+LF+GVWDRTYGSL+EY RR NYSYLDS
Subjt:  DFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS

AT3G13340.1 Transducin/WD40 repeat-like superfamily protein

3.2e-192

73.03

Show/hide

Query:  MSHYHGDDTDYMAD-EYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE
        MS+Y GDD +YM D + EMED++DDMD+E+ G ++  SDSD +EF+ S++K+ DTTA QAR+G DIQGIPW+RL+I+REKYR+TRLEQYKNYEN+PNSGE
Subjt:  MSHYHGDDTDYMAD-EYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE

Query:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD
         SEK                             LRNLVWATSKHD YL+S+F V H+SSL+  K EVLNV GHVAP+EKHPGSLLEGFTQTQVSTLAVKD
Subjt:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD

Query:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD
          LVAGGFQGELICKHLDRPGVSFCSR TYDDNAITNA+EIY   SGA+HFTASNND GVRDFDME++QL +HFRFPWPVNH +L+PDGKLL IVGDNP+
Subjt:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD

Query:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE
        GL+VD  TGKT+ +L GHLDFSFASAWHPDG+TF+TGNQDKTCR+WD+RNLS+SV  LKGNLGAIRSIRY+SDG+YMAMAEPADF+HV+DV  GYE EQE
Subjt:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE

Query:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS
        IDFFGEISG+SFSPDTE+LF+GVWDRTYGSLLE+ RRRNYSYLDS
Subjt:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS

AT3G13340.2 Transducin/WD40 repeat-like superfamily protein

3.2e-192

73.03

Show/hide

Query:  MSHYHGDDTDYMAD-EYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE
        MS+Y GDD +YM D + EMED++DDMD+E+ G ++  SDSD +EF+ S++K+ DTTA QAR+G DIQGIPW+RL+I+REKYR+TRLEQYKNYEN+PNSGE
Subjt:  MSHYHGDDTDYMAD-EYEMEDIDDDMDDEYHGREMEGSDSDADEFN-SSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE

Query:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD
         SEK                             LRNLVWATSKHD YL+S+F V H+SSL+  K EVLNV GHVAP+EKHPGSLLEGFTQTQVSTLAVKD
Subjt:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD

Query:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD
          LVAGGFQGELICKHLDRPGVSFCSR TYDDNAITNA+EIY   SGA+HFTASNND GVRDFDME++QL +HFRFPWPVNH +L+PDGKLL IVGDNP+
Subjt:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD

Query:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE
        GL+VD  TGKT+ +L GHLDFSFASAWHPDG+TF+TGNQDKTCR+WD+RNLS+SV  LKGNLGAIRSIRY+SDG+YMAMAEPADF+HV+DV  GYE EQE
Subjt:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE

Query:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS
        IDFFGEISG+SFSPDTE+LF+GVWDRTYGSLLE+ RRRNYSYLDS
Subjt:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDS

AT5G56190.1 Transducin/WD40 repeat-like superfamily protein

1.3e-180

68.26

Show/hide

Query:  DDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEK----
        D  +YMADEY+M+D++DDM+  + GR+++ SDS+ ++F+  +K  DT+AAQAR G DIQGIPW+ L++TR+ YRKTRLEQYKNYENIPNSG+ S K    
Subjt:  DDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEK----

Query:  -------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF
                                 LRNLVWATSKHD YLLS++S+ HWSSL+  +SE+LNV GHVAP+EKHP SLLEGFT+TQVSTLAVK++LLVAGGF
Subjt:  -------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF

Query:  QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGLLVDSQT
        QGELICKHLDRPGVSFCSRTTY +NAITNAV+IY ++SGA+HF ASNND GVRDFDME+++L + FR+ WPVNH +L+PDGKL+ +VGD+PDGLLVD+  
Subjt:  QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGLLVDSQT

Query:  GKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEIDFFGEIS
        G+T+ +L+GHLD+SFASAWHP+G+TFATGNQDKTCRIWD R LS+SVA LKGNLGA+RSIR++SDG+Y+AMAEPADF+H++D K+GY+KEQEIDFFGEIS
Subjt:  GKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEIDFFGEIS

Query:  GVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        G+SFSPDTESLF+GVWDRTYGSLLEY R R+Y+YLDSL
Subjt:  GVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

AT5G56190.2 Transducin/WD40 repeat-like superfamily protein

1.0e-182

68.16

Show/hide

Query:  MSHYHGDD--TDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE
        MS Y+GDD   +YMADEY+M+D++DDM+  + GR+++ SDS+ ++F+  +K  DT+AAQAR G DIQGIPW+ L++TR+ YRKTRLEQYKNYENIPNSG+
Subjt:  MSHYHGDD--TDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGE

Query:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD
         S K                             LRNLVWATSKHD YLLS++S+ HWSSL+  +SE+LNV GHVAP+EKHP SLLEGFT+TQVSTLAVK+
Subjt:  GSEK-----------------------------LRNLVWATSKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKD

Query:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD
        +LLVAGGFQGELICKHLDRPGVSFCSRTTY +NAITNAV+IY ++SGA+HF ASNND GVRDFDME+++L + FR+ WPVNH +L+PDGKL+ +VGD+PD
Subjt:  KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHFTASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPD

Query:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE
        GLLVD+  G+T+ +L+GHLD+SFASAWHP+G+TFATGNQDKTCRIWD R LS+SVA LKGNLGA+RSIR++SDG+Y+AMAEPADF+H++D K+GY+KEQE
Subjt:  GLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGNLGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQE

Query:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL
        IDFFGEISG+SFSPDTESLF+GVWDRTYGSLLEY R R+Y+YLDSL
Subjt:  IDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCCATTACCACGGGGATGATACTGATTACATGGCTGATGAATACGAAATGGAGGACATTGATGATGATATGGATGACGAGTATCACGGTAGAGAAATGGAAGGCTC
GGATTCTGATGCTGATGAATTCAACTCGAGTAGCAAAATAGTTGATACCACTGCTGCTCAGGCAAGAAGAGGAGTAGATATTCAAGGTATTCCGTGGGAGAGGCTTAGTA
TTACTAGAGAGAAGTACCGGAAAACTAGGCTCGAGCAGTACAAGAACTATGAAAATATTCCTAATTCAGGAGAGGGGTCGGAGAAGTTGAGGAACTTAGTATGGGCGACA
TCGAAGCATGATGCCTACCTTTTATCACATTTTTCTGTAATTCATTGGTCATCACTATCGTGCACCAAGTCTGAAGTTCTCAATGTTTCGGGACATGTGGCACCTACAGA
GAAGCACCCTGGGAGCTTATTGGAGGGATTTACACAGACACAAGTCAGTACACTTGCAGTAAAAGATAAGCTGCTTGTTGCTGGAGGATTTCAGGGAGAGCTTATTTGCA
AGCATCTCGACCGCCCGGGTGTTAGTTTTTGTTCCAGAACAACTTACGATGATAATGCCATAACTAATGCTGTTGAGATATATACCAGCGCTAGTGGTGCGGTTCATTTC
ACTGCTTCTAATAATGATTCTGGAGTCAGAGATTTTGATATGGAGAAATTTCAGCTTTCCAGGCACTTCCGTTTTCCTTGGCCAGTTAATCATGGCGCCTTGAACCCAGA
CGGTAAACTTCTCGTGATAGTTGGTGACAATCCTGACGGTTTATTGGTGGACTCACAAACTGGAAAGACAGTTGCATCTCTACGTGGGCACTTGGATTTTTCATTTGCAT
CAGCATGGCATCCCGATGGCATTACCTTTGCCACTGGGAACCAAGACAAAACTTGCAGGATTTGGGATGTAAGAAATTTGTCCAAGTCAGTTGCTGCTCTAAAAGGCAAC
CTCGGAGCCATTCGCTCCATCCGTTATTCCTCTGATGGTCAGTACATGGCAATGGCTGAACCAGCCGACTTCCTGCACGTGTTCGACGTGAAAACCGGATACGAGAAGGA
GCAAGAAATCGACTTCTTTGGAGAGATCTCTGGTGTTTCGTTCAGTCCAGACACGGAATCACTTTTCGTCGGAGTTTGGGATCGAACTTACGGTAGCCTTCTCGAGTACC
ACAGACGCAGAAATTATAGTTACCTCGACTCGCTAACAGCAATGGCAGCCGCCGCCTCGTCCTCCGCTGTTTTCGCCGCCTCGTCCTTCTCCGCCTCCGTTGGGAGGCAG
CAGCCGAACCCCTCCACCATATCATACCAAGGCCTCCGCCCACTCCCGGGGATCAAATCCAGCCGCAGCCTTGCAGGCGTCAAGAGCCCAAGATCCGTGGTGGTGAAGGC
AGAGCTGAACCCATCCGTGGTGATAAGCCTGAGCACAGGGCTGTCCCTGTTCCTGGGGAGGTTCGTGTTCTTCAACTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCGG
AGCAAAATGGGGTGACCCATTTCGAGGCAGGCGATGTGAGGGCGAAGGAGTATGTTAGCTTGTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCT
TGGGGCTCTATTGGCCATATCGTTGCTTATTACATCTTGGCCACTTCTAGCAATGGCTATGATCCCAAGTTCTTCTAA

mRNA sequence

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CTCTTTTCTTTTCTCTCTCCATTTCTCTCGACCCCATCTCATATTATCCTAATTTGGACTATTTTTTTAATCAAATTCAACAAATTGATTGTTTTCCCCATCTGGGTCTC
TCTCTTTTCCTCCATATTCATCTGTTTCTGTCTTGGATTTCACAGATCGTCTTGGATCGTTGCAGCTTTCTTTGTTTTTTCTCACCTCCAAGGTAGAGGTGTAAATTTCT
GTTCTTAATATGTCCCATTACCACGGGGATGATACTGATTACATGGCTGATGAATACGAAATGGAGGACATTGATGATGATATGGATGACGAGTATCACGGTAGAGAAAT
GGAAGGCTCGGATTCTGATGCTGATGAATTCAACTCGAGTAGCAAAATAGTTGATACCACTGCTGCTCAGGCAAGAAGAGGAGTAGATATTCAAGGTATTCCGTGGGAGA
GGCTTAGTATTACTAGAGAGAAGTACCGGAAAACTAGGCTCGAGCAGTACAAGAACTATGAAAATATTCCTAATTCAGGAGAGGGGTCGGAGAAGTTGAGGAACTTAGTA
TGGGCGACATCGAAGCATGATGCCTACCTTTTATCACATTTTTCTGTAATTCATTGGTCATCACTATCGTGCACCAAGTCTGAAGTTCTCAATGTTTCGGGACATGTGGC
ACCTACAGAGAAGCACCCTGGGAGCTTATTGGAGGGATTTACACAGACACAAGTCAGTACACTTGCAGTAAAAGATAAGCTGCTTGTTGCTGGAGGATTTCAGGGAGAGC
TTATTTGCAAGCATCTCGACCGCCCGGGTGTTAGTTTTTGTTCCAGAACAACTTACGATGATAATGCCATAACTAATGCTGTTGAGATATATACCAGCGCTAGTGGTGCG
GTTCATTTCACTGCTTCTAATAATGATTCTGGAGTCAGAGATTTTGATATGGAGAAATTTCAGCTTTCCAGGCACTTCCGTTTTCCTTGGCCAGTTAATCATGGCGCCTT
GAACCCAGACGGTAAACTTCTCGTGATAGTTGGTGACAATCCTGACGGTTTATTGGTGGACTCACAAACTGGAAAGACAGTTGCATCTCTACGTGGGCACTTGGATTTTT
CATTTGCATCAGCATGGCATCCCGATGGCATTACCTTTGCCACTGGGAACCAAGACAAAACTTGCAGGATTTGGGATGTAAGAAATTTGTCCAAGTCAGTTGCTGCTCTA
AAAGGCAACCTCGGAGCCATTCGCTCCATCCGTTATTCCTCTGATGGTCAGTACATGGCAATGGCTGAACCAGCCGACTTCCTGCACGTGTTCGACGTGAAAACCGGATA
CGAGAAGGAGCAAGAAATCGACTTCTTTGGAGAGATCTCTGGTGTTTCGTTCAGTCCAGACACGGAATCACTTTTCGTCGGAGTTTGGGATCGAACTTACGGTAGCCTTC
TCGAGTACCACAGACGCAGAAATTATAGTTACCTCGACTCGCTAACAGCAATGGCAGCCGCCGCCTCGTCCTCCGCTGTTTTCGCCGCCTCGTCCTTCTCCGCCTCCGTT
GGGAGGCAGCAGCCGAACCCCTCCACCATATCATACCAAGGCCTCCGCCCACTCCCGGGGATCAAATCCAGCCGCAGCCTTGCAGGCGTCAAGAGCCCAAGATCCGTGGT
GGTGAAGGCAGAGCTGAACCCATCCGTGGTGATAAGCCTGAGCACAGGGCTGTCCCTGTTCCTGGGGAGGTTCGTGTTCTTCAACTTCCAAAGGGAGAATGTGAGCAAGC
AAGTGCCGGAGCAAAATGGGGTGACCCATTTCGAGGCAGGCGATGTGAGGGCGAAGGAGTATGTTAGCTTGTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGAT
GTTCTTGCTTGGGGCTCTATTGGCCATATCGTTGCTTATTACATCTTGGCCACTTCTAGCAATGGCTATGATCCCAAGTTCTTCTAA

Protein sequence

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MSHYHGDDTDYMADEYEMEDIDDDMDDEYHGREMEGSDSDADEFNSSSKIVDTTAAQARRGVDIQGIPWERLSITREKYRKTRLEQYKNYENIPNSGEGSEKLRNLVWAT
SKHDAYLLSHFSVIHWSSLSCTKSEVLNVSGHVAPTEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYTSASGAVHF
TASNNDSGVRDFDMEKFQLSRHFRFPWPVNHGALNPDGKLLVIVGDNPDGLLVDSQTGKTVASLRGHLDFSFASAWHPDGITFATGNQDKTCRIWDVRNLSKSVAALKGN
LGAIRSIRYSSDGQYMAMAEPADFLHVFDVKTGYEKEQEIDFFGEISGVSFSPDTESLFVGVWDRTYGSLLEYHRRRNYSYLDSLTAMAAAASSSAVFAASSFSASVGRQ
QPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLA
WGSIGHIVAYYILATSSNGYDPKFF

CmoCh06G006750 (gene) of Cucurbita moschata (Rifu) v1 genome