; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G006760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationCmo_Chr06:3413687..3423769
RNA-Seq ExpressionCmoCh06G006760
SyntenyCmoCh06G006760
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005681 - spliceosomal complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0001054 - RNA polymerase I activity (molecular function)
InterPro domainsIPR036643 - DNA-directed RNA polymerase, insert domain superfamily
IPR036603 - RNA polymerase, RBP11-like subunit
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR006973 - Pre-mRNA-splicing factor Cwf15/Cwc15
IPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]0.0e+0094.58Show/hide
Query:  RKDFHNIILKARRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDE
        +KD  +      RKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDE
Subjt:  RKDFHNIILKARRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDE

Query:  DDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMKY
        DDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLH   KY
Subjt:  DDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMKY

Query:  LVPLKPSLSRRNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTR
        LVPLKPSLSR NPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTR
Subjt:  LVPLKPSLSRRNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTR

Query:  VECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLG
        VECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLG
Subjt:  VECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLG

Query:  LIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILA
        LIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILA
Subjt:  LIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILA

Query:  RLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR
        RLSSGQ                      EIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR
Subjt:  RLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  PRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-21794.19Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGK KNLHNMSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]7.2e-22094.67Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]2.0e-21793.46Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSG+DKNLH+MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLE+IEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]8.0e-21994.19Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGKDKNLHNMSESDSE EDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLE+IEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC16.9e-20086.23Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGKDKNLHNMSES+SEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVIDLKEDD+E
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDP+LANAFRRILI+EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PIRVDPRLF+YSDKD PNE NTIVFRLH  CERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL-PEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPV
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQ+TL  EF+NNPIGPKD DIILARL  GQ                      EIELEAHAVKGMGKTHAKWSPV
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL-PEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPV

Query:  ATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVK
        ATAWYRMLPEVVL+E+IEDELAEEL+ KCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVK
Subjt:  ATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVK

Query:  ILEDKCERLIAELS
        ILEDKCERLIAELS
Subjt:  ILEDKCERLIAELS

A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC14.2e-19785.02Show/hide
Query:  MSGKDKNLH-NMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDM
        MSGKDKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIHTDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+
Subjt:  MSGKDKNLH-NMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDM

Query:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH RCERGKPRLT  S+ALTWL
Subjt:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWL

Query:  PNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPV
        PNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N IGPKD DIILARL  GQ                      EIELEAHAVKGMGKTHAKWSPV
Subjt:  PNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPV

Query:  ATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVK
        ATAWYRMLPEV+LLE+IEDELAEELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP VLFTEAVK
Subjt:  ATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVK

Query:  ILEDKCERLIAELS
        ILEDKCERLIAELS
Subjt:  ILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC12.3e-19585.86Show/hide
Query:  MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSL
        MS+S+SEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+EFDMIGIDP+L
Subjt:  MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSL

Query:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSK LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSD

Query:  KSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        KSV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQ                      EIELEAHAVKGMGKTHAKWSPVATAWY+MLPEV
Subjt:  KSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

Query:  VLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIA
        VL E+IEDELAEELK KCPV+VFDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIA
Subjt:  VLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIA

Query:  ELS
        ELS
Subjt:  ELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC13.5e-22094.67Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC19.5e-21893.46Show/hide
Query:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
        MSG+DKNLH+MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME
Subjt:  MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLP

Query:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQ                      EIELEAHAVKGMGKTHAKWSPVA
Subjt:  NGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVA

Query:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
        TAWYRMLPEVVLLE+IEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI
Subjt:  TAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKI

Query:  LEDKCERLIAELS
        LEDKCERLIAELS
Subjt:  LEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC11.5e-7444.62Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  R+RV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE     I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN
        P   DI++A+L  GQ                      EI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  
Subjt:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN

Query:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        GKK A VA PR  T  RE  R E  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC17.6e-6337.17Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        V+  RT +   +D      ++ + G Y     DN   LD F+KN K+ +  L ++ M F++ GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHVRCERGK---------PRLTATSKA----LTWLPNGSEFPLVSDKSVSNTKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL   S+     L W P G +                   
Subjt:  VLAHRLGLIPIRVDPRLFEYSDKDTPNEK------NTIVFRLHVRCERGK---------PRLTATSKA----LTWLPNGSEFPLVSDKSVSNTKPKTYTS

Query:  FSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE
                  FA+NPI   + DI++A+L  GQ                      EI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A +
Subjt:  FSCSQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEE

Query:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
         +   P  V ++E+  +GKK+A VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  LKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC11.1e-7445.43Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  RTRV        +  T  + G YA  G D++   + F KNF+++V+ + ED +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE     I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSD--KDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN
        P   DI++A+L  GQ                      EI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL       V ++E++  
Subjt:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN

Query:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        GKK A VA  R  T  RE  R E  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC16.0e-7645.7Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
        VE  RTRV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE

Query:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
        +LAHRLGLIPI  DPRLFEY ++  +   E +T+ FRL VRC R       +S       N   +          T+  T+       D  PE A   I 
Subjt:  VLAHRLGLIPIRVDPRLFEYSDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG

Query:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN
        P   DI++A+L  GQ                      EI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V ++++I  
Subjt:  PKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIAN

Query:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        GKK A VA PR  T  RE  R E  +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  GKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac14.2e-6940.37Show/hide
Query:  PHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
        P++E +RT+V        +     YSGAY S+G DNS  L+ F++NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ

Query:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHVRCER----GK-PRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL
        DEVLAHRLG+IPI+VDPR F +     PN+    ++T++F+L V+CE+    GK    TA SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIRVDPRLFEYSDKDTPNE----KNTIVFRLHVRCER----GK-PRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTL

Query:  PEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVN
        P   + P  P + DI + +L  GQ                       I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L  KCP  
Subjt:  PEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVN

Query:  VFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        VFDIED      +   ARP  CT+CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  VFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 431.0e-13964.86Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGAY+S+G+DNS+RL++F ++FK++VI L E DM FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCS
        KV VANNTS++QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LHV+C +G PR    +  L WLPNGSE  L+ +   S T PKTYTSF+ S
Subjt:  KVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCS

Query:  QDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNK
        QD+ PEFA NPI P   DI++A+L  GQ                      EIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++ E + AEEL   
Subjt:  QDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNK

Query:  CPVNVFDIEDIANGKKRATVARPRACTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        CP  VFDIED+  G+KRATVARPR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  CPVNVFDIEDIANGKKRATVARPRACTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein3.3e-13062.3Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKN
        SQD+LPEFANNPI P D DI++A+L+ GQ                      EIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKN

Query:  KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
         CP NVFDIED+  GKKRATVA+PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein3.3e-13062.3Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKN
        SQD+LPEFANNPI P D DI++A+L+ GQ                      EIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKN

Query:  KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
         CP NVFDIED+  GKKRATVA+PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein4.4e-9060.21Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NFK++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  L+ +     +KPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSC

Query:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD+LPEFANNPI P D DI++A+L+ GQ                      EIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDTLPEFANNPIGPKDGDIILARLSSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein1.3e-7071.23Show/hide
Query:  GLNLQAEGAVYRPGRKDFHNII-----LKARRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADD
        G N Q    ++ P +K     +     LK RR EGQ T +ELQ+ NLRDELE+RERRHFSSK+KSY DDRD R+GSQLLLE  KRD E+RIIPRS+DADD
Subjt:  GLNLQAEGAVYRPGRKDFHNII-----LKARRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADD

Query:  SDVDVKSDNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRF
        SDVD+KSD++SDD+ DDDDEDDTEAL+AEL+QIKKER EE+LRKE++++ EEL  KE ELL+GNPLLN  P SFSVKRRWDDDVVFKNQARGE K PKRF
Subjt:  SDVDVKSDNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRF

Query:  INDTIRNDFHRKFLHKYMK
        INDTIRNDFHRKFLH+YMK
Subjt:  INDTIRNDFHRKFLHKYMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCCACCACTATTTTTGCAAAGACTGCTGTAGCTGGAGCTGCTGGAATTGAAGTTGGTAGAGTCATTGGAGTGTCTCTTTTGGGATCTTGTTATTTTGGCTTAAA
CCTCCAAGCCGAAGGCGCTGTTTACCGTCCAGGAAGGAAGGACTTCCATAACATTATACTAAAGGCAAGGAGGAAGGAAGGACAAGATACCCATGATGAATTGCAAAGGA
GGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGC
GGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGTGATGATGATGAGGATGACGACGA
CGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCA
AGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGC
GAAACAAAGACTCCTAAGCGCTTTATAAATGATACCATCAGGAACGACTTCCACCGAAAATTCTTGCACAAGTACATGAAATACCTCGTGCCGCTTAAACCTTCCCTCTC
CCGCCGAAACCCTCCTCAGCCGTGCCGTTCAGTGCCGCCGCCGTCGTCGTCATTCTCGATTTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCGATCTTCTTCCTTCTC
TTGGTCTCAGGTTTATAATGTCCGGTAAAGATAAGAACTTGCATAATATGTCGGAGTCGGATTCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAAC
CTTCCAGATGTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGC
ATATGCTTCGTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCG
GCATTGACCCATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGAT
GAAGTGCTTGCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACT
CCATGTTCGCTGTGAACGTGGAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCAA
ACACAAAGCCCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTC
AGCTCGGGTCAGACTAATTATTTATACTGCAAGTACCTTTACTTCCAATTGAAATCCATTTTGGTAGTTCCAGTTCCGGAAATTGAACTTGAAGCTCATGCTGTTAAAGG
TATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGACATAGAGGATGAGTTGGCAGAAGAACTCA
AAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGCACATTGTGCAGAGAATGCATAAGA
GGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCAGAGGTGCTGTTCACTGAAGCTGT
AAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCCACCACTATTTTTGCAAAGACTGCTGTAGCTGGAGCTGCTGGAATTGAAGTTGGTAGAGTCATTGGAGTGTCTCTTTTGGGATCTTGTTATTTTGGCTTAAA
CCTCCAAGCCGAAGGCGCTGTTTACCGTCCAGGAAGGAAGGACTTCCATAACATTATACTAAAGGCAAGGAGGAAGGAAGGACAAGATACCCATGATGAATTGCAAAGGA
GGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGC
GGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGTGATGATGATGAGGATGACGACGA
CGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCA
AGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGC
GAAACAAAGACTCCTAAGCGCTTTATAAATGATACCATCAGGAACGACTTCCACCGAAAATTCTTGCACAAGTACATGAAATACCTCGTGCCGCTTAAACCTTCCCTCTC
CCGCCGAAACCCTCCTCAGCCGTGCCGTTCAGTGCCGCCGCCGTCGTCGTCATTCTCGATTTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCGATCTTCTTCCTTCTC
TTGGTCTCAGGTTTATAATGTCCGGTAAAGATAAGAACTTGCATAATATGTCGGAGTCGGATTCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAAC
CTTCCAGATGTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGC
ATATGCTTCGTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCG
GCATTGACCCATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGAT
GAAGTGCTTGCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACT
CCATGTTCGCTGTGAACGTGGAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCAA
ACACAAAGCCCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTC
AGCTCGGGTCAGACTAATTATTTATACTGCAAGTACCTTTACTTCCAATTGAAATCCATTTTGGTAGTTCCAGTTCCGGAAATTGAACTTGAAGCTCATGCTGTTAAAGG
TATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGACATAGAGGATGAGTTGGCAGAAGAACTCA
AAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGCACATTGTGCAGAGAATGCATAAGA
GGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCAGAGGTGCTGTTCACTGAAGCTGT
AAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGATTCTTCCTGTCCAAAAGAGATGAACGTGTATATTATTTCATTTTATTCAGCAGTCATCAAT
TTTTGTAATATAGGAGGATTCATATTCTATTTTTCTTTTTAATTGACAGTAGAATAGTAAGTTTTGCTGATCTCTCTTGATTCCTCCTAGATCTTATGAATGCCAACTTG
GAGGTGATCGAATAAGAGAATAGACAAAGATAATGTTATTTCTTCAATGGAATTCAAGTCTGTTTACTTATAAGGAATTCAAGTATCTAAGAGCTTTGAGTACTTAAATT
TATAGAAATGTAAGCTTGTTATACTTTCTGTTATGTAGCTTACTGAGATATGCTGGAATGTTTAGATGTTCATGTTTATTTGATGAGATTTGTTGATGACAGTCTCTATT
ATAATAGATGATGTTGTAAAGAGCAACAATTATTTGAAGCAAAT
Protein sequenceShow/hide protein sequence
MYSTTIFAKTAVAGAAGIEVGRVIGVSLLGSCYFGLNLQAEGAVYRPGRKDFHNIILKARRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEG
GKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARG
ETKTPKRFINDTIRNDFHRKFLHKYMKYLVPLKPSLSRRNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQEDVGKEGIEWIMN
LPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQD
EVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARL
SSGQTNYLYCKYLYFQLKSILVVPVPEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIR
GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS