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CmoCh06G006800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G006800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationCmo_Chr06:3439570..3442094
RNA-Seq ExpressionCmoCh06G006800
SyntenyCmoCh06G006800
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596757.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]7.4e-26100Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

KAG7028294.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-27100Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR

XP_004148258.1 protein NOI4 [Cucumis sativus]1.7e-2290.32Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

XP_022950564.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.8e-40100Show/hide
Query:  MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
Subjt:  MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

XP_038905925.1 protein NOI4-like [Benincasa hispida]7.7e-2391.94Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK AADP KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

TrEMBL top hitse value%identityAlignment
A0A0A0L7F7 AvrRpt-cleavage domain-containing protein8.3e-2390.32Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

A0A1S3BL66 RPM1-interacting protein 4-like1.1e-2290.32Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

A0A5D3CRF8 RPM1-interacting protein 4-like7.0e-2288.71Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KPQA R
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR

A0A6J1GG65 RPM1-interacting protein 4-like8.8e-41100Show/hide
Query:  MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
Subjt:  MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

A0A6P9E4Z8 protein NOI4-like1.5e-1980.65Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA
        MS+KGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKK+GG+PESPGN    KP  D  KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQA

SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.9e-1870.31Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQ
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKK+GG+P SPG + +        DP+KPQ
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQ

Q8GYN5 RPM1-interacting protein 46.1e-0745.45Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADP
        EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ SG         P  + + +P
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADP

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.1e-1678.26Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPG
        M++KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPG
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPG

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.1e-1968.66Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQAVR
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKK+GG+P SPG + +        DP+KPQ V+
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQAVR

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.6e-1867.69Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQAVR
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKK+GG+P SPG + +        DP+KPQ V+
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQAVR

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein6.1e-1869.35Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQ
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKK+GG+P SPG + +        DP+KPQ
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKA---KPAADPAKPQ

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein5.9e-1377.78Show/hide
Query:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK----SGGQPES
        KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKK    SG  P S
Subjt:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK----SGGQPES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTACTACCTTTCCTAAAACGTCCGATCTTTTGGTCTTCTCCTTTTCCCCACTTTCTTGAATTCATGTCGGAGAAGGGTCAGCCACTACCTAAGTTTGGTGAATG
GGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAATCCGGTGGCCAACCTGAATCACCTGGAAACGCGCCGAAGG
CAAAACCTGCAGCTGATCCTGCCAAACCTCAGGCTGTAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATAAATAAATAAATAAATATCAATACAATCATAAACTCTGAACATATAATGAGCTTACTACCTTTCCTAAAACGTCCGATCTTTTGGTCTTCTCCTTTTCCCCACTTTCT
TGAATTCATGTCGGAGAAGGGTCAGCCACTACCTAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATG
AGAAGAAATCCGGTGGCCAACCTGAATCACCTGGAAACGCGCCGAAGGCAAAACCTGCAGCTGATCCTGCCAAACCTCAGGCTGTAAGATAAAAAATGGTTCTGCTGCAT
TCAGAGCCCGTAACCGTGTTGCTCTGTGATCGTCTCCACTGGTTTTCGATTGCGGTCAGCCTGCTATACTATTTCGCTTCTTAGTCTTCATTCATGGAGCAAAAAAGTTG
AAGAATTTTACGTGCTTTATTTGTGGTGCTGTGAAGTGTTGGTAGAAGCTGACCTGTGCTATCTAATTTGTTTCTACTTCTTTTTTGTTGTTTTTTTTAAGAAAGCATGT
TGCTGCTTAGATCTGATATTGAATCTCTAATATTGTTTGTTAAATGGTTTCTTTCTCTCTTTCCATTTTCATTTTCCCCTGTAGAAGATGTTCGATTACTCGAAAACAAC
CCTTTAGAGAAAGTCCATGCCTCATGGAGCATAATATTCTCTTGCTTTCTAAGCATGGAGCATAATATTTATGTTGAAAATGTTGGCAAACATTGGAAGAAAGAATAATA
CGAACATAGATACTCGTTACAACGATTCATAATGGCGTATTAGATGTTGAGAAAGTAATTATTCAACCATTCTGAAGCTGATCATCTTATAAGGATGAATAGTTTTAGCT
CTAAACCAAATTCGATGACTTCTTTTAGTTTCATTAAAAACAGAGAAACAAAAAAAAAACTCCTCAACCTTTCCAACACTTGTTCTGCCATGCTTGTTGTATGTCTGCTG
GAGTTTGAATCTGCCTTGGATATGAGATTATATTCTGTAGGTGCTCGAATACAGGCTTCCAACTTTTTTCTCGAACAGGCGACGTAAAAGGAAAACTTGAAGACTGCTTG
CACCGATGAGCGCTGCTGATTCGAGAACAGCCTTAAGAATCGCCATTGTGCTCATTGCTTCATTCACTGCAAAAAAGGTACTTCACTTACTAAATGCTAGAAGTGTTATT
GTTTAGATCTGATATTTGAATTAATACAAAGGAATAGATTGTATATCAAATGGGTTAATATAGATGAACAATACCTTTGGCTTGTCGCTCTGTCTGTGCCTCTAACCATT
GCTGTTCAAACTCAATAACGCCTAAGGTTTCTCCCAAC
Protein sequenceShow/hide protein sequence
MSLLPFLKRPIFWSSPFPHFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKPQAVR