; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G007040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G007040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:3572234..3572721
RNA-Seq ExpressionCmoCh06G007040
SyntenyCmoCh06G007040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596774.1 hypothetical protein SDJN03_09954, partial [Cucurbita argyrosperma subsp. sororia]2.5e-53100Show/hide
Query:  RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
        RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
Subjt:  RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR

Query:  F
        F
Subjt:  F

KAG7028302.1 hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-53100Show/hide
Query:  RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
        RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
Subjt:  RHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR

Query:  F
        F
Subjt:  F

XP_008449006.1 PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]1.1e-2484.13Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        MCCFGK+CM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG LCG GRPFF APP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

XP_023553402.1 uncharacterized protein LOC111810828 [Cucurbita pepo subsp. pepo]6.0e-2379.69Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFF-AAPPRRF
        MCCFGKVCM C+CL+LV VA+G LFGFG+FKDGFHKIKDK DFCDG +CG GRPFF AAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFF-AAPPRRF

XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]3.5e-2377.14Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLC-------GRGRPFFAAPPRRF
        MCCFGKVCM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVD+CDG LC       G GRPFFAAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLC-------GRGRPFFAAPPRRF

TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein2.2e-1875.81Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRG--RPFFAAPP
        MCC GKVCM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG  CG G    F  APP
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRG--RPFFAAPP

A0A1S3BL26 uncharacterized protein LOC1034910085.3e-2584.13Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF
        MCCFGK+CM C+CL+LV VAIGLLFGFG+FKDGFHKIKDKVDFCDG LCG GRPFF APP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRRF

A0A6J1E285 uncharacterized protein LOC1110257962.4e-1770.97Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR
        MCC GK+CM C CL+ VAVA+GLLFGFG+FKDGFHKIKDKVDFCDG LC  G  F     RR
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFAAPPRR

A0A6J1EWB7 uncharacterized protein LOC1114387734.9e-2376.12Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGR----GRPFFAAPPRRF
        MCCFGKVCM C+CL+LV VA+G LFGFG+FKDGFHKIKDK DFCDG +CG     GRPFFAAPP RF
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGR----GRPFFAAPPRRF

W9QQT2 Uncharacterized protein6.3e-1865.62Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCD----GDLCGRGRPFFAAPP
        MCC G++CM C+CL+L+ + IGLLFGFG+FK+GFHK+KD VDFCD    G  CG GRPFFA PP
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCD----GDLCGRGRPFFAAPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein3.9e-1253.23Show/hide
Query:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDF-------CDGDLCGRGRPF
        MCC G++CM C+CL+LV +AIG LFGFG+FKDGFHKI + +         C G L  RG  F
Subjt:  MCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDF-------CDGDLCGRGRPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGCTCCCACCAAACAGCTCCACCTAATCCAACTGCCACCCGCCATCGCCTTCAAAAGCACCTCCATCTTCCTTCCTCCCTTCCTCCTCTTTCTCTGCCTCGCCA
TTTCCTGCCACAAATTCACACCAACGAGCAAGATCCGGCCTCTGCGACCATGTGCTGCTTTGGAAAGGTGTGCATGTTCTGCTCTTGCCTAGTTCTGGTGGCCGTCGCCA
TCGGATTGCTCTTCGGTTTCGGAATTTTCAAAGACGGATTCCATAAGATTAAGGATAAGGTCGATTTCTGCGATGGAGATCTCTGCGGCCGTGGAAGACCTTTCTTCGCT
GCGCCTCCTCGTCGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACGCTCCCACCAAACAGCTCCACCTAATCCAACTGCCACCCGCCATCGCCTTCAAAAGCACCTCCATCTTCCTTCCTCCCTTCCTCCTCTTTCTCTGCCTCGCCA
TTTCCTGCCACAAATTCACACCAACGAGCAAGATCCGGCCTCTGCGACCATGTGCTGCTTTGGAAAGGTGTGCATGTTCTGCTCTTGCCTAGTTCTGGTGGCCGTCGCCA
TCGGATTGCTCTTCGGTTTCGGAATTTTCAAAGACGGATTCCATAAGATTAAGGATAAGGTCGATTTCTGCGATGGAGATCTCTGCGGCCGTGGAAGACCTTTCTTCGCT
GCGCCTCCTCGTCGCTTCTAG
Protein sequenceShow/hide protein sequence
MVRSHQTAPPNPTATRHRLQKHLHLPSSLPPLSLPRHFLPQIHTNEQDPASATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIKDKVDFCDGDLCGRGRPFFA
APPRRF