; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G007060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G007060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein pno1
Genome locationCmo_Chr06:3578641..3581993
RNA-Seq ExpressionCmoCh06G007060
SyntenyCmoCh06G007060
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650098.1 hypothetical protein Csa_010636 [Cucumis sativus]2.5e-20285.65Show/hide
Query:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS
        MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGS
Subjt:  MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGS

Query:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPTFPPSPPSFSV
        VA+LVYTRTGDFL ELKSYVREEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVE   GS N  AAMRSAKV+QDEDLKDWPWP           
Subjt:  VAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPTFPPSPPSFSV

Query:  PPSTPYPFFTYLSTFLGL-SVETQNN-SIMQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPI
                  +    LG+ SVET +N SIMQS EASTSM+VE +S+Q K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPI
Subjt:  PPSTPYPFFTYLSTFLGL-SVETQNN-SIMQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPI

Query:  YEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATK
        Y+QMKIDIRMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATK
Subjt:  YEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATK

Query:  TRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        TRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  TRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

KAG6577533.1 Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-11992.65Show/hide
Query:  PFFTYLSTFLGLSVETQNNSIMQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDI
        PFFT ++  L LSVETQ+NSIMQSTE+STSMEVE VS++ K VVSTLPPKP FDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDI
Subjt:  PFFTYLSTFLGLSVETQNNSIMQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDI

Query:  RMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADT
        RMNLK RKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADT
Subjt:  RMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADT

Query:  KIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        KIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
Subjt:  KIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

XP_022951370.1 RNA-binding protein pno1-like isoform X1 [Cucurbita moschata]8.6e-118100Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_023005535.1 RNA-binding protein pno1-like isoform X1 [Cucurbita maxima]2.5e-11799.11Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVEAVS+QPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_023540523.1 RNA-binding protein pno1-like isoform X1 [Cucurbita pepo subsp. pepo]4.3e-11798.66Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVEAVS+QPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A1S3BLP2 RNA-binding protein pno18.1e-11495.98Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVE +S+Q K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1EWL7 RNA-binding protein pno11.8e-11395.98Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVE VS++ K VVSTLPPKP FDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1GHF0 RNA-binding protein pno1-like isoform X14.2e-118100Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1GIL7 RNA-binding protein pno1-like isoform X28.1e-114100Show/hide
Query:  MEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV
        MEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV
Subjt:  MEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV

Query:  HAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
        HAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
Subjt:  HAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV

Query:  YSKLRAVTARLAERF
        YSKLRAVTARLAERF
Subjt:  YSKLRAVTARLAERF

A0A6J1KXN9 RNA-binding protein pno1-like isoform X11.2e-11799.11Show/hide
Query:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEASTSMEVEAVS+QPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDA+ALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno11.1e-6460.71Show/hide
Query:  KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno18.8e-6567.42Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q6VBQ6 RNA-binding protein PNO12.6e-6460.71Show/hide
Query:  KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVD
        +PHF P+   ++  G  + RKV+VP HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+R+D
Subjt:  KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VEU3 RNA-binding protein PNO19.7e-6458.29Show/hide
Query:  VSSQPKPVVSTLPPK-PHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFM
        + +Q +   S+ P K PHF  L   ++  G  + RKV VP HRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+
Subjt:  VSSQPKPVVSTLPPK-PHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFM

Query:  LGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL
        LGF V DA+AL+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  L
Subjt:  LGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL

Query:  RAVTARLAERF
        RAV  R AERF
Subjt:  RAVTARLAERF

Q9VR89 RNA-binding protein pno17.9e-6665.78Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAVALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G02640.1 unknown protein1.1e-5763.89Show/hide
Query:  PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTR
        PQ   S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL++T 
Subjt:  PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTR

Query:  TGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPW
        T +FL  L SYVRE++ ++ILKLAGGL V +F LEW+VL LAFFLKYYA+V+   G  NG A  R+ KV+ +E LK+ PW
Subjt:  TGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPW

AT3G13230.1 RNA-binding KH domain-containing protein3.8e-9580.56Show/hide
Query:  STSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA
        ST MEVE  +    P    LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIY+QMK+DIRMNLKARKVELKTRADTPDISNLQK A
Subjt:  STSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA

Query:  DFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA
        DFVHAFMLGFD+ DA++LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPA
Subjt:  DFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA

Query:  GKVYSKLRAVTARLAE
        GKVYSKLR+V+ARL E
Subjt:  GKVYSKLRAVTARLAE

AT5G16250.1 unknown protein2.5e-6266.12Show/hide
Query:  GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVY
        G   SS+ +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TIAAAVSGCA AS    RW+  HMV TVLTAIFQGSV+VL++
Subjt:  GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVY

Query:  TRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWP
        T T  FLG LKSYVREED AVILKL GGL + +F L+W+VL  AFFLKYYA+V+G    G+G A  R+ KV+ +E+ KDWPWP
Subjt:  TRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWP

AT5G36710.1 unknown protein2.4e-4962.92Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     ++TAS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP
        GDFL  LKSYVREEDG VILKL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP
Subjt:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP

AT5G36800.1 unknown protein2.4e-4962.92Show/hide
Query:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT
        MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC++     ++TAS R +G HMV TVLTAIFQG+V+VL++TRT
Subjt:  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAM-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRT

Query:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP
        GDFL  LKSYVREEDG VILKL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP
Subjt:  GDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTCCATAAGCGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGC
CTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCG
CCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGG
GACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCT
TACATTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGACGAGGATTTGA
AGGACTGGCCTTGGCCCACCTTCCCGCCGTCTCCTCCGTCGTTCTCTGTGCCACCGTCGACGCCGTACCCCTTCTTCACATATTTGTCTACCTTTCTTGGTCTCAGTGTG
GAAACTCAGAACAATTCTATAATGCAGTCAACCGAAGCCTCCACTTCCATGGAAGTAGAAGCAGTTTCATCTCAACCGAAGCCAGTAGTTAGCACATTACCCCCAAAACC
TCACTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGATATTCTCCGCTCAAGAAAGCATGGATGGAAA
TTTACACCCCAATTTATGAGCAGATGAAAATTGACATCCGAATGAATCTCAAGGCACGAAAAGTCGAACTTAAAACCAGAGCAGACACGCCTGATATCAGTAACTTACAG
AAATGTGCAGATTTTGTCCATGCTTTCATGCTCGGTTTTGATGTGATCGATGCCGTTGCACTCCTACGGGTGGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGT
TAAGACGCTTCGAGGCGAGCACCTGTCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAACGCCACAAAGACGAGGATAGTTATTG
CAGACACCAAGATTCACATATTAGGATCCTTCGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTTTATTCAAAACTG
AGAGCAGTCACAGCCAGATTGGCTGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTCCATAAGCGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGC
CTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCG
CCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGG
GACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCT
TACATTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGACGAGGATTTGA
AGGACTGGCCTTGGCCCACCTTCCCGCCGTCTCCTCCGTCGTTCTCTGTGCCACCGTCGACGCCGTACCCCTTCTTCACATATTTGTCTACCTTTCTTGGTCTCAGTGTG
GAAACTCAGAACAATTCTATAATGCAGTCAACCGAAGCCTCCACTTCCATGGAAGTAGAAGCAGTTTCATCTCAACCGAAGCCAGTAGTTAGCACATTACCCCCAAAACC
TCACTTTGATCCTCTAAAGCCTCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGATATTCTCCGCTCAAGAAAGCATGGATGGAAA
TTTACACCCCAATTTATGAGCAGATGAAAATTGACATCCGAATGAATCTCAAGGCACGAAAAGTCGAACTTAAAACCAGAGCAGACACGCCTGATATCAGTAACTTACAG
AAATGTGCAGATTTTGTCCATGCTTTCATGCTCGGTTTTGATGTGATCGATGCCGTTGCACTCCTACGGGTGGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGT
TAAGACGCTTCGAGGCGAGCACCTGTCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAACGCCACAAAGACGAGGATAGTTATTG
CAGACACCAAGATTCACATATTAGGATCCTTCGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTTTATTCAAAACTG
AGAGCAGTCACAGCCAGATTGGCTGAAAGGTTTTGATCTTTCATGATTATTGTAGTTTTCATGAGAAGTTTCTATCGAATACTCATTTTTGCTCACTGGGAAGAGTTTAT
TGATTATTGAAAAGCTTGTGCATTGAAGTTATGTTCGTGATCCGATTATGAATCAATCTGAAAATGGGTATCAGGTGATTGACGTTAATAGCTATGCTGATTGATTGTGA
TCCGATTATGAATCAATCTAAAAATGGTATCAGGTGAATTACGATTGAGGTTCATATGTAATAGCTAAGCTTATTGATTGTGATCTGATTATGAATCCATCTGAAAATGG
GTATCAGGTGTTTGACATTTATCTTGTTGATCGAGGTTCGTATGTAATAGCTATGTCGATTGATTGTGATCCGATTATGAATCAATCTTAAAACGGGTATCAAGTGA
Protein sequenceShow/hide protein sequence
MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTG
DFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPTFPPSPPSFSVPPSTPYPFFTYLSTFLGLSV
ETQNNSIMQSTEASTSMEVEAVSSQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQ
KCADFVHAFMLGFDVIDAVALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL
RAVTARLAERF