; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G007540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G007540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription initiation factor TFIID subunit 11
Genome locationCmo_Chr06:3916473..3919984
RNA-Seq ExpressionCmoCh06G007540
SyntenyCmoCh06G007540
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR006809 - TAFII28-like protein domain
IPR009072 - Histone-fold
IPR045127 - Transcription initiation factor TFIID subunit 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596814.1 Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperma subsp. sororia]1.8e-10899.1Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADALDLHDGDDEPKSAAAAA NSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

KAG7028341.1 Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-10999.55Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

XP_022940909.1 transcription initiation factor TFIID subunit 11 [Cucurbita moschata]1.2e-109100Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

XP_023005534.1 transcription initiation factor TFIID subunit 11 [Cucurbita maxima]1.3e-10696.88Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK-SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADA+DLHDGDD+PK +AAAAATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK-SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

XP_023538856.1 transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo]1.2e-10798.67Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAA--ATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADALDLHDGDDEPKSAAAA  ATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAA--ATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC

Query:  HLREAYRRLKLEGKIPRKSVPRLFR
        HLREAYRRLKLEGKIPRKSVPRLFR
Subjt:  HLREAYRRLKLEGKIPRKSVPRLFR

TrEMBL top hitse value%identityAlignment
A0A1S4DX73 transcription initiation factor TFIID subunit 113.5e-9490.58Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T V A V ADA DL DGDD+PKS A+ AT+S  P  STTS+FVSSSS+VSAAPKTKEDD+EEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        RE YRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

A0A5D3D798 Transcription initiation factor TFIID subunit 111.2e-9491.03Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T V A V ADA DL DGDD+PKS A+ AT+S  P  STTS+FVSSSS+VSAAPKTKEDD+EEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

A0A6J1DFN0 transcription initiation factor TFIID subunit 113.1e-9890.75Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK----SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEE
        MKQSKDPFEAAFEEQEESPPNSPSAAD +EIQTNVAA   +DALD HDGDD+PK    +AAA AT+SGIPSA TTS+FVSSSSNVSAAPKTK+DD+EEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK----SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEE

Query:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIR
        ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+G IR
Subjt:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIR

Query:  PCHLREAYRRLKLEGKIPRKSVPRLFR
        PCHLREAYRRLKLEGKIPRKSVPRLFR
Subjt:  PCHLREAYRRLKLEGKIPRKSVPRLFR

A0A6J1FLN4 transcription initiation factor TFIID subunit 116.0e-110100Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
        VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL
Subjt:  VELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHL

Query:  REAYRRLKLEGKIPRKSVPRLFR
        REAYRRLKLEGKIPRKSVPRLFR
Subjt:  REAYRRLKLEGKIPRKSVPRLFR

A0A6J1KZI1 transcription initiation factor TFIID subunit 116.2e-10796.88Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK-SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADA+DLHDGDD+PK +AAAAATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPK-SAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

SwissProt top hitse value%identityAlignment
F4HR03 Transcription initiation factor TFIID subunit 11b2.2e-3747.32Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MK SKDPFEAA EEQEESP  +                         +GD+                               A  K K     E +   E
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        VE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SG IRPCH
Subjt:  VELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        +RE+YRRLKL+GK+P++SV RLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

Q54XM9 Transcription initiation factor TFIID subunit 115.8e-1734.86Show/hide
Query:  DGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMK
        D D++   + +  ++S    + + S   S S + S+  +  +DDD+E   N+        S     +  +M  ++  F+E+Q +R+E ++R+ FQ+AN+K
Subjt:  DGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMK

Query:  RLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIP--RKSVPR
        +++ S+  +  ++    IV+ GIAK+FVGE+VE AR +M E  ++G IRP H+REAYRRLK    IP  +KSVP+
Subjt:  RLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIP--RKSVPR

Q5RA91 Transcription initiation factor TFIID subunit 112.0e-1736.89Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPS
        E    ++  + P  P A D   I  +     DAD  +    + E KS           S  TT     SS    AA K K D  E++E+  +V       
Subjt:  EAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPS

Query:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLK
          D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +   ++P H+REA RRLK
Subjt:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLK

Query:  LEGKIP
         +G+IP
Subjt:  LEGKIP

Q5U1X0 Transcription initiation factor TFIID subunit 113.4e-1735.71Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVS----AAPKTKEDDDEEEEENVEVELA
        E    E+  + P +P +AD   I        DAD            S  AAA  S + S   + +  +   + S    AA K K D  +++E+  +V   
Subjt:  EAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVS----AAPKTKEDDDEEEEENVEVELA

Query:  KFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAY
              D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +   ++P H+REA 
Subjt:  KFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAY

Query:  RRLKLEGKIP
        RRLK +G+IP
Subjt:  RRLKLEGKIP

Q9M565 Transcription initiation factor TFIID subunit 115.3e-5556.28Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDD
        MK SKDPFEAA  EEQEESPP SP         ++D  I+ +     D   +D+      P   A             TS+ V+ + N     K K++DD
Subjt:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDD

Query:  EEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDS
        EEEEEN++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +S
Subjt:  EEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDS

Query:  GAIRPCHLREAYRRLKLEGKIPRKSVPRLFR
        G IRPCH+RE+YRRLKLEGK+P++SVPRLFR
Subjt:  GAIRPCHLREAYRRLKLEGKIPRKSVPRLFR

Arabidopsis top hitse value%identityAlignment
AT1G20000.1 TBP-associated factor 11B1.6e-3847.32Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE
        MK SKDPFEAA EEQEESP  +                         +GD+                               A  K K     E +   E
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVE

Query:  VELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        VE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SG IRPCH
Subjt:  VELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        +RE+YRRLKL+GK+P++SV RLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

AT4G20280.1 TBP-associated factor 113.8e-5656.28Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDD
        MK SKDPFEAA  EEQEESPP SP         ++D  I+ +     D   +D+      P   A             TS+ V+ + N     K K++DD
Subjt:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDD

Query:  EEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDS
        EEEEEN++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +S
Subjt:  EEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDS

Query:  GAIRPCHLREAYRRLKLEGKIPRKSVPRLFR
        G IRPCH+RE+YRRLKLEGK+P++SVPRLFR
Subjt:  GAIRPCHLREAYRRLKLEGKIPRKSVPRLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAGGAATCTCCACCGAACTCCCCCTCCGCTGCCGATGATCTCGAAATTCAGACCAACGTTGCTGC
CACCGTCGACGCCGACGCTCTTGATTTGCACGATGGTGACGATGAACCAAAATCCGCCGCCGCCGCCGCCACAAATTCTGGTATTCCTTCTGCATCCACTACTTCTTTGT
TCGTTTCGTCTTCCTCCAATGTCTCTGCCGCACCTAAAACCAAAGAAGACGACGATGAAGAAGAGGAAGAGAATGTCGAAGTGGAGCTCGCTAAATTCCCCTCGAGTGGC
GATCCAGATAAGATGGCGAAGATGCAAGCCATTCTTTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAA
AAGGCTATTAGCAAGCATCTCAGGAACGCAGAAAATTTCTGTACCAATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTCGTTGGTGAACTCGTGGAAACGGCTAGAG
TAGTTATGACTGAGCGGAATGATTCTGGAGCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGATTCCAAGGAAATCAGTGCCTAGA
CTCTTTCGCTAA
mRNA sequenceShow/hide mRNA sequence
CAGCTTACAAATCACACAGTCGAAATTGTTTCATGAAACATTTCAAAATTGGGATCAAATCAGGTTAGTTCACGATCAATTCGGAGAGTATTTCCACAAAAAATGAAGCA
ATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAGGAATCTCCACCGAACTCCCCCTCCGCTGCCGATGATCTCGAAATTCAGACCAACGTTGCTGCCACCGTCG
ACGCCGACGCTCTTGATTTGCACGATGGTGACGATGAACCAAAATCCGCCGCCGCCGCCGCCACAAATTCTGGTATTCCTTCTGCATCCACTACTTCTTTGTTCGTTTCG
TCTTCCTCCAATGTCTCTGCCGCACCTAAAACCAAAGAAGACGACGATGAAGAAGAGGAAGAGAATGTCGAAGTGGAGCTCGCTAAATTCCCCTCGAGTGGCGATCCAGA
TAAGATGGCGAAGATGCAAGCCATTCTTTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTCCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTAT
TAGCAAGCATCTCAGGAACGCAGAAAATTTCTGTACCAATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTCGTTGGTGAACTCGTGGAAACGGCTAGAGTAGTTATG
ACTGAGCGGAATGATTCTGGAGCTATCAGGCCATGCCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGATTCCAAGGAAATCAGTGCCTAGACTCTTTCG
CTAATCGGTCTATTCAATTTCTAGTCTTTGTATTAGGAGTTTTTGTAGGCAAAACATCTCATCATATATATTACTTAAGTTTCTAACATATTTTTGTATAAAATTGGCTT
GTTTGTGTATCAAACTTCTGAAAAGGAGGAAAACTCAGGCATGGAGTTAGCAGCACTTGAATTAAACTTGTACATTTTAAGCATTAGAACACATTTAATAATATTATATG
ATGATATGCTATGTTCATAGGTG
Protein sequenceShow/hide protein sequence
MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAATNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSG
DPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPR
LFR