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CmoCh06G007760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G007760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionE3 ubiquitin-protein ligase MBR2-like
Genome locationCmo_Chr06:4034722..4042235
RNA-Seq ExpressionCmoCh06G007760
SyntenyCmoCh06G007760
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596836.1 hypothetical protein SDJN03_10016, partial [Cucurbita argyrosperma subsp. sororia]1.6e-8066.95Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        MSF DSVTF CNLH Y GPDQLLQIRI HS RLFIGSP PG+PFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI--------------------------------------------------------------------VCYDEMK
        FV+QMACGNYEMTFYIVAEIDYIQ+                                                                    VCYDEMK
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI--------------------------------------------------------------------VCYDEMK

Query:  EGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA
        EGGEE+IRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA
Subjt:  EGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA

XP_023539471.1 uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]8.7e-7160Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        MS  DS TFRCNLH Y  PDQLLQIRI HS+RL  GSPF G+PFNIV+ETL T   DAQF LPLRELEDPLFC+AYIEEFLSSYNL ATI NAIA+RIAS
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI---------------------------------------------------------------------VCYDEM
        FV+QMACGNYEMTFYIVAEIDYIQ+                                                                     VCYDEM
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI---------------------------------------------------------------------VCYDEM

Query:  KEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA
        K+GGEEV RIPCGHVYHKSCVLTWLQRNNSCPLCRKK+EA
Subjt:  KEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA

XP_023539480.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]1.0e-7162.72Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        MS  D  TFRCNLH Y GPDQLLQIRI HSSRL  GSPF G+PFNIV+ETL T   DAQF LPLRELEDPLFC+AYI+EFLSSYNL ATI NAIA+RIAS
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI---------------------------------------------------------VCYDEMKEGGEEVIRIPC
        FV+QMACGNYEMTFYIVAEIDYIQ+                                                         VCYDEMK+GGEEV RIPC
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI---------------------------------------------------------VCYDEMKEGGEEVIRIPC

Query:  GHVYHKSCVLTWLQRNNSCPLCRKKIEA
        GHVYHKSCVLTWLQRNNSCPLCR K+EA
Subjt:  GHVYHKSCVLTWLQRNNSCPLCRKKIEA

XP_023539483.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]3.2e-6559.57Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        MS  DS TFRCNLH Y G DQLLQIRI HSSRL   SPF G+ FNIV+ TL T   DAQF LPLRELEDPLFCRAYIEEFLSSYNL ATI NAIA+ IAS
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI------------------------------------------------------------VCYDEMKEGGEEVIR
        FV+QMAC NYEM FYIVAEIDYIQ+                                                            VCYDEMK+GGEEV R
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI------------------------------------------------------------VCYDEMKEGGEEVIR

Query:  IPCGHVYHKSCVLTWLQRNNSCPLCRKKIE
        IPCGHVYHK CVLTWLQRNNSCPLC KK+E
Subjt:  IPCGHVYHKSCVLTWLQRNNSCPLCRKKIE

XP_023539485.1 RING-H2 finger protein ATL80-like [Cucurbita pepo subsp. pepo]1.2e-7263.79Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        MSF DS+TFRCNLH Y G  QLLQIRI HS+RL IGS FPG+PFNIVYETLTT   DAQF LPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRI S
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI-------------------------------------------------------------VCYDEMKEGGEEVI
        FV+QMACGNYEMTFYIVAEIDYIQ+                                                             VCYDEMK+GGEEV 
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI-------------------------------------------------------------VCYDEMKEGGEEVI

Query:  RIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA
        RI CGHVYHKSCVLTWLQRNNSCPL RKK+EA
Subjt:  RIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA

TrEMBL top hitse value%identityAlignment
A0A6J1DBR5 E3 ubiquitin-protein ligase RNF181-like1.2e-2537.09Show/hide
Query:  MSFPDSVTFRCNLHSYHG-------PDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNA
        MS   S + R  LH +         P Q+LQ+R+   SR+   SP       I+ ET  T   +A F LPL  L   LF  AYI + L S +L       
Subjt:  MSFPDSVTFRCNLHSYHG-------PDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNA

Query:  IAQRIASFVIQMACGNY-EMTFYIVAEIDYIQ-----------------------------------IVCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQ
        IA++IASFV+++A GN  ++  ++VA +DYI+                                    VC +EM  GG EVI++PCGHVYH+SC+L+WL 
Subjt:  IAQRIASFVIQMACGNY-EMTFYIVAEIDYIQ-----------------------------------IVCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQ

Query:  RNNSCPLCRKKIE
        +NNSCPLCR K+E
Subjt:  RNNSCPLCRKKIE

A0A6J1G7L1 NEP1-interacting protein-like 13.5e-4145.07Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        M F ++ T R +L   HG DQLLQ+R+ +SSRL   SP  G P++I+ ET +T   DA F LPLRELEDPLFC AY+ E +SS+NL +   N I Q+I S
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI-----------------------------------------VCYD--EMKEGGE-EVIRIPCGHVYHKSCVLTWL
        FV Q A  +Y+  F +VA+IDYIQ+                                         VCY+  E ++GGE EV +IPCGH +HKSC+LTW 
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI-----------------------------------------VCYD--EMKEGGE-EVIRIPCGHVYHKSCVLTWL

Query:  QRNNSCPLCRKKI
        QR+NSCPLCR K+
Subjt:  QRNNSCPLCRKKI

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like1.0e-4043.06Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        M F +S T R +L    G DQLLQ+R+ +SSRL   SP+ G P++I+ ET +T+  D  F LPLRELEDPLFC AY+ E +SS NLD+   N IAQ+I S
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQIV-----------------------------------------------CYDEMKEGGEEVIRIPCGHVYHKSCVL
         V Q A  +Y++ F +VA+IDYIQ+                                                CYDE K G +EV +IPCGH++HKSC+L
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQIV-----------------------------------------------CYDEMKEGGEEVIRIPCGHVYHKSCVL

Query:  TWLQRNNSCPLCRKKI
        TW   +NSCPLCR K+
Subjt:  TWLQRNNSCPLCRKKI

A0A6J1L186 NEP1-interacting protein-like 14.3e-3944.13Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        M   ++ T R +L   HG DQ L+ R+ +SSRL   SP  G P++I+ ET +T   DA F LPLRELEDPLFC AY+ E +SS NLD+   N I Q+I S
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQI-----------------------------------------VCYD--EMKEGGE-EVIRIPCGHVYHKSCVLTWL
         V Q A  +Y+  F +VA+IDYIQ+                                         VCY+  E ++GGE EV +IPCGHV+HKSC+LTW 
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQI-----------------------------------------VCYD--EMKEGGE-EVIRIPCGHVYHKSCVLTWL

Query:  QRNNSCPLCRKKI
        QR+NSCPLCR K+
Subjt:  QRNNSCPLCRKKI

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like2.3e-4042.92Show/hide
Query:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS
        M F +S T R +L  +HG DQLLQ+R+ +SSRL   SP  G P++I+ ET  T   DA F LPLRELEDPLFC AY+ E +SS NLD+   N I Q+I S
Subjt:  MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIAS

Query:  FVIQMACGNYEMTFYIVAEIDYIQIV--------------------------------------------------CYDEMKEGGEEVIRIPCGHVYHKS
         V Q A  +Y+  F +V +IDYIQ+                                                   CYDE K G +EV +IPCGH++HKS
Subjt:  FVIQMACGNYEMTFYIVAEIDYIQIV--------------------------------------------------CYDEMKEGGEEVIRIPCGHVYHKS

Query:  CVLTWLQRNNSCPLCRKKI
        C+LTW Q +NSCPLCR K+
Subjt:  CVLTWLQRNNSCPLCRKKI

SwissProt top hitse value%identityAlignment
O22197 Probable E3 ubiquitin-protein ligase RHC1A1.1e-0747.73Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

P0CH30 E3 ubiquitin-protein ligase RING14.9e-0850Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC D+ +E G E  ++PC H+YHK C+L WL+ +NSCP+CR ++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

Q5M974 E3 ubiquitin-protein ligase RNF1811.1e-0752.27Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC  E +E GE V ++PC H++H SC+L WL + NSCPLCR ++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.4e-0753.66Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCR
        VC DE  E G +V ++PC HV+H+ C+L WL+ +NSCP+CR
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCR

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c2.9e-0844.44Show/hide
Query:  VCYDEMKEGGE-EVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        +CYD+M E  E +  ++PCGH++ K+C+  WL+ + +CPLCRK++
Subjt:  VCYDEMKEGGE-EVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

Arabidopsis top hitse value%identityAlignment
AT1G60360.1 RING/U-box superfamily protein2.7e-0947.73Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC +E   GG +   +PC H+YHK C++ WL+ NNSCP+CR+ +
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

AT2G40830.1 RING-H2 finger C1A7.7e-0947.73Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

AT2G40830.2 RING-H2 finger C1A7.7e-0947.73Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

AT2G40830.3 RING-H2 finger C1A7.7e-0947.73Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI
        VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI

AT5G54990.1 RING/U-box superfamily protein7.7e-0944.19Show/hide
Query:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKK
        +C  E+  G    +++PC HV+H+ C++TWL++N SCP+CR K
Subjt:  VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCCCAGATTCAGTCACATTCCGCTGCAATCTCCACAGCTACCATGGTCCCGATCAGCTTCTCCAAATTCGAATAAGTCATTCAAGCCGTCTGTTTATCGGATC
GCCGTTCCCTGGACATCCTTTCAATATCGTCTATGAAACTCTCACTACTATAACGGTGGATGCTCAGTTCTCCCTTCCTTTGCGGGAGCTCGAAGATCCGTTGTTCTGCC
GAGCTTACATCGAAGAATTTCTAAGTTCTTACAACCTTGATGCCACAATCAACAACGCCATTGCTCAGAGGATTGCCTCTTTCGTCATTCAAATGGCGTGCGGAAACTAC
GAGATGACGTTCTACATCGTTGCGGAAATCGATTACATCCAGATTGTGTGTTATGATGAGATGAAGGAGGGCGGGGAAGAAGTGATCAGAATCCCCTGCGGACATGTGTA
TCATAAGTCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAAGAAAATAGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCCCAGATTCAGTCACATTCCGCTGCAATCTCCACAGCTACCATGGTCCCGATCAGCTTCTCCAAATTCGAATAAGTCATTCAAGCCGTCTGTTTATCGGATC
GCCGTTCCCTGGACATCCTTTCAATATCGTCTATGAAACTCTCACTACTATAACGGTGGATGCTCAGTTCTCCCTTCCTTTGCGGGAGCTCGAAGATCCGTTGTTCTGCC
GAGCTTACATCGAAGAATTTCTAAGTTCTTACAACCTTGATGCCACAATCAACAACGCCATTGCTCAGAGGATTGCCTCTTTCGTCATTCAAATGGCGTGCGGAAACTAC
GAGATGACGTTCTACATCGTTGCGGAAATCGATTACATCCAGATTGTGTGTTATGATGAGATGAAGGAGGGCGGGGAAGAAGTGATCAGAATCCCCTGCGGACATGTGTA
TCATAAGTCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAAGAAAATAGAAGCTTAA
Protein sequenceShow/hide protein sequence
MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNY
EMTFYIVAEIDYIQIVCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKIEA