; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G007930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G007930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationCmo_Chr06:4199223..4201084
RNA-Seq ExpressionCmoCh06G007930
SyntenyCmoCh06G007930
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022943171.1 14 kDa proline-rich protein DC2.15-like [Cucurbita moschata]1.1e-85100Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC

Query:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

XP_023005561.1 pEARLI1-like lipid transfer protein 1 isoform X1 [Cucurbita maxima]2.5e-8291Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH                  SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP

Query:  GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

XP_023540190.1 pEARLI1-like lipid transfer protein 1 [Cucurbita pepo subsp. pepo]5.1e-8393.81Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH            SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP

Query:  GTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        GTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  GTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

XP_031737657.1 pEARLI1-like lipid transfer protein 3 [Cucumis sativus]3.8e-7073.21Show/hide
Query:  NMASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGG
        NMAS KTTTSIALFF LNLLFFSL  ACGSCSHP+ RP+P                   P SGGSPGSGGSPG+GGSPGSGGSPGSGGSPGSGGSPGSGG
Subjt:  NMASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGG

Query:  SPGSGGSPGTG----------------------SPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGINI
        SPGSGGSPG+G                      +PGTGGGTCPRDALKIG+CARVL+LVNATIG+PPVTPCCTLIQGLADLEAA+CLCTAIRASILG+NI
Subjt:  SPGSGGSPGTG----------------------SPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGINI

Query:  NLPINLSLLLNVCSRNTPRGFQCP
        NLPINLSLLLNVCSRN+PR F+CP
Subjt:  NLPINLSLLLNVCSRNTPRGFQCP

XP_038903682.1 14 kDa proline-rich protein DC2.15-like [Benincasa hispida]5.1e-7590.27Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTG--SPGTGG
        M+S KTTTSIALFF LNLLFFSL  ACGSCSHPI RPRP P SGG PG GGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPG+G  +PGTGG
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTG--SPGTGG

Query:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        GTCPRDA+KIGVCARVL LVNATIGTPPVTPCCTLIQGLADLEAA+CLCTAIRASILG+NINLPINLSLLLNVCSRNTPRGFQCP
Subjt:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

TrEMBL top hitse value%identityAlignment
A0A1S3BLL6 lipid transfer protein EARLI 1-like1.2e-6977.62Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS
        MAS KTTTSIALFF LN+LFFSL  ACGSCSHPI RP+P             P SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS

Query:  PGT-GSPG--------------TGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCS
        PG+ GSPG              TGGGTCPRDALKIGVCARVL++VN T+GTPPVTPCC+LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLSLLLNVCS
Subjt:  PGT-GSPG--------------TGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCS

Query:  RNTPRGFQCP
        RNTPR FQCP
Subjt:  RNTPRGFQCP

A0A5D3CP01 Lipid transfer protein EARLI 1-like1.6e-6978.43Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS
        MAS KTTTSIALFF LN+LFFSL  ACGSCSHPI RP+P                   P SGG PGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRP-------------------PHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGS

Query:  PGSGGSPGTGSPG---TGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRG
        PGSGG+PG GS G   TGGGTCPRDALKIGVCARVL++VN T+GTPPVTPCC+LIQGLADLEAA+CLCTAIRA+ILG+NI+LPINLSLLLNVCSRNTPR 
Subjt:  PGSGGSPGTGSPG---TGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRG

Query:  FQCP
        FQCP
Subjt:  FQCP

A0A6J1FQZ7 14 kDa proline-rich protein DC2.15-like5.3e-86100Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC

Query:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

A0A6J1KTG8 14 kDa proline-rich protein DC2.15-like isoform X25.3e-86100Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTC

Query:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  PRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

A0A6J1KVB3 pEARLI1-like lipid transfer protein 1 isoform X11.2e-8291Show/hide
Query:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
        MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH                  SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP
Subjt:  MASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPH------------------SGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSP

Query:  GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
        GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP
Subjt:  GSGGSPGTGSPGTGGGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.151.1e-2742.22Show/hide
Query:  SKTTTSIALFFSLNLLFFSLANACGSCSHPIR-RPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPR
        SK + S+ALFF+LN+LFF+L ++   C  P + +P+P                                                  T +P    G CPR
Subjt:  SKTTTSIALFFSLNLLFFSLANACGSCSHPIR-RPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPR

Query:  DALKIGVCARVLTLV-NATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
        DALK+GVCA VL LV N  IG+PP  PCC+L++GL +LEAAVCLCTAI+A+ILG N+NLPI LSL+LN C +  P GF+C
Subjt:  DALKIGVCARVLTLV-NATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

Q39176 Lipid transfer protein EARLI 11.1e-2246.2Show/hide
Query:  SSKTTTSIALFFSLNLLFFSL--ANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGG
        +SK + SIALFF+LN++FF+L  A  CG    P  +P P                 SP     P     P    S  S   P     P T   +PG+  G
Subjt:  SSKTTTSIALFFSLNLLFFSL--ANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGG

Query:  TCPRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
         CP DAL++GVCA VL +L+N  +G P   PCC+LIQGL DL+AA+CLCTA+RA++LGIN+N+PI+LS+LLNVC+R  P GFQC
Subjt:  TCPRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

Q9S7I2 Putative lipid-binding protein AIR14.0e-3074.12Show/hide
Query:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC
        GTCP+++++IG C  VL LV+ T+G PPV PCC+LIQGLADLEAAVCLCTA++ASILGI NINLPINLS+LLNVCSRN P+ FQC
Subjt:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC

Q9SU35 pEARLI1-like lipid transfer protein 16.2e-2343.41Show/hide
Query:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGGTC
        +SK + S+ALFF+LN+LFF+L  A      P  +P+P                        P     P     P     P     P T   +PG+ G +C
Subjt:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGGTC

Query:  PRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
        P DALK+GVCA VL +L+N  +G P    CC+LIQGL D++AA+CLCTA+RA++LGIN+N+PI+LS+LLNVC+R  P GFQC
Subjt:  PRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

Q9ZSP6 Putative lipid-binding protein AIR1B6.4e-2874.12Show/hide
Query:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC
        GTCP   ++I  CA VL LV+ T+G PPV PCC+LIQGLADLEAA CLCTA++ASILGI NINLPINLS+LLNVCSRN P+GFQC
Subjt:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC

Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein2.4e-3048.3Show/hide
Query:  TTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPRDALK
        ++SIALF +LNLLFF+  +ACGSC                                      +P  GG P     P    +P   SP +G   CP+D LK
Subjt:  TTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPRDALK

Query:  IGVCARVLT-LVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
        +GVCA VL  L++ T+G PPV PCC+LIQGLAD+EAAVCLCTA++A+ILGIN+NLPI+LSLLLNVCS+  P GFQC
Subjt:  IGVCARVLT-LVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-3249.44Show/hide
Query:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPR
        +S+TT S+ALF  LN LFF+  +ACG+C  P   P+P H                            P     P     P     P   SP      CPR
Subjt:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTGGGTCPR

Query:  DALKIGVCARVLT-LVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
        DALK+GVCA VL  L+N T+G PPV PCCTLIQGLADLEAA CLCTA++A+ILGIN+N+P++LSLLLNVCS+  PRGFQC
Subjt:  DALKIGVCARVLT-LVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

AT4G12470.1 azelaic acid induced 14.4e-2443.41Show/hide
Query:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGGTC
        +SK + S+ALFF+LN+LFF+L  A      P  +P+P                        P     P     P     P     P T   +PG+ G +C
Subjt:  SSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGGTC

Query:  PRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
        P DALK+GVCA VL +L+N  +G P    CC+LIQGL D++AA+CLCTA+RA++LGIN+N+PI+LS+LLNVC+R  P GFQC
Subjt:  PRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.5e-2446.2Show/hide
Query:  SSKTTTSIALFFSLNLLFFSL--ANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGG
        +SK + SIALFF+LN++FF+L  A  CG    P  +P P                 SP     P     P    S  S   P     P T   +PG+  G
Subjt:  SSKTTTSIALFFSLNLLFFSL--ANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGT--GSPGTGGG

Query:  TCPRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC
         CP DAL++GVCA VL +L+N  +G P   PCC+LIQGL DL+AA+CLCTA+RA++LGIN+N+PI+LS+LLNVC+R  P GFQC
Subjt:  TCPRDALKIGVCARVL-TLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQC

AT4G12550.1 Auxin-Induced in Root cultures 12.8e-3174.12Show/hide
Query:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC
        GTCP+++++IG C  VL LV+ T+G PPV PCC+LIQGLADLEAAVCLCTA++ASILGI NINLPINLS+LLNVCSRN P+ FQC
Subjt:  GTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGI-NINLPINLSLLLNVCSRNTPRGFQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTACCAAAGGGATATAATATCTCTAGGGTTTTCAAACATGGCTTCATCCAAAACCACCACCTCCATTGCTTTGTTCTTCTCTCTCAACCTTCTCTTCTTTTCCCT
AGCCAATGCTTGTGGCTCATGTTCCCACCCTATAAGAAGGCCAAGGCCCCCTCATTCAGGCGGCAGTCCCGGCTCCGGTGGAAGCCCCGGTTCCGGTGGCAGCCCGGGAT
CAGGAGGAAGTCCGGGTTCCGGTGGCAGCCCGGGCTCTGGTGGAAGCCCTGGTTCAGGTGGCAGCCCTGGCTCTGGTGGCAGTCCTGGAACAGGTAGTCCAGGTACTGGT
GGAGGTACTTGTCCTAGGGATGCACTCAAGATCGGTGTATGTGCTAGAGTGCTAACCCTGGTAAATGCAACCATTGGCACTCCACCAGTAACACCATGCTGCACATTAAT
TCAAGGGCTAGCGGATCTTGAGGCAGCTGTTTGTCTTTGCACTGCAATCAGAGCAAGTATTTTAGGCATCAATATAAACCTTCCAATTAATCTTAGTCTACTACTTAACG
TTTGCAGCAGAAATACTCCTCGTGGATTCCAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTACCAAAGGGATATAATATCTCTAGGGTTTTCAAACATGGCTTCATCCAAAACCACCACCTCCATTGCTTTGTTCTTCTCTCTCAACCTTCTCTTCTTTTCCCT
AGCCAATGCTTGTGGCTCATGTTCCCACCCTATAAGAAGGCCAAGGCCCCCTCATTCAGGCGGCAGTCCCGGCTCCGGTGGAAGCCCCGGTTCCGGTGGCAGCCCGGGAT
CAGGAGGAAGTCCGGGTTCCGGTGGCAGCCCGGGCTCTGGTGGAAGCCCTGGTTCAGGTGGCAGCCCTGGCTCTGGTGGCAGTCCTGGAACAGGTAGTCCAGGTACTGGT
GGAGGTACTTGTCCTAGGGATGCACTCAAGATCGGTGTATGTGCTAGAGTGCTAACCCTGGTAAATGCAACCATTGGCACTCCACCAGTAACACCATGCTGCACATTAAT
TCAAGGGCTAGCGGATCTTGAGGCAGCTGTTTGTCTTTGCACTGCAATCAGAGCAAGTATTTTAGGCATCAATATAAACCTTCCAATTAATCTTAGTCTACTACTTAACG
TTTGCAGCAGAAATACTCCTCGTGGATTCCAGTGTCCCTAA
Protein sequenceShow/hide protein sequence
MNYQRDIISLGFSNMASSKTTTSIALFFSLNLLFFSLANACGSCSHPIRRPRPPHSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGSGGSPGTGSPGTG
GGTCPRDALKIGVCARVLTLVNATIGTPPVTPCCTLIQGLADLEAAVCLCTAIRASILGININLPINLSLLLNVCSRNTPRGFQCP