; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G008090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G008090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome locationCmo_Chr06:4361829..4364438
RNA-Seq ExpressionCmoCh06G008090
SyntenyCmoCh06G008090
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596864.1 hypothetical protein SDJN03_10044, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3896.77Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        MAS CRRIASRISQ+SFRTLLRTNSPAKSP SSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

KAG7028395.1 hypothetical protein SDJN02_09576 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-3998.92Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        MASACRRIASRISQ+SFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

XP_022937781.1 uncharacterized protein LOC111444048 isoform X1 [Cucurbita moschata]3.1e-38100Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_022937856.1 uncharacterized protein LOC111444048 isoform X2 [Cucurbita moschata]3.1e-38100Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_023538762.1 uncharacterized protein LOC111799595 isoform X4 [Cucurbita pepo subsp. pepo]1.8e-3898.92Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        MASACRRIASRISQSSFRTLLRT SPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

TrEMBL top hitse value%identityAlignment
A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X15.0e-3489.25Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        MASAC RIASRISQSSFR  +RT SP KSPSS FPLP KS+APSV RFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

A0A6J1FBC3 uncharacterized protein LOC111444048 isoform X11.5e-38100Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1FBJ4 uncharacterized protein LOC111444048 isoform X21.5e-38100Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1KTL9 uncharacterized protein LOC111498548 isoform X11.3e-3492.31Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC+RIASR+SQSSFRT+LRTNSP KSPSS F LP KSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1L2N2 uncharacterized protein LOC111498548 isoform X21.3e-3492.31Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASAC+RIASR+SQSSFRT+LRTNSP KSPSS F LP KSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

SwissProt top hitse value%identityAlignment
Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial8.0e-0540Show/hide
Query:  MASACRRIASRISQSSFRTLLRTNSPA---KSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG
        MAS CR + S+ + S+FR+ +  N P+   KS SS   +PP            +R   +LG +QSLLP ++AVA AR+ SCL  +S++ R+L+QG
Subjt:  MASACRRIASRISQSSFRTLLRTNSPA---KSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQG

Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein3.2e-1757.89Show/hide
Query:  MASACRRIASRISQSSFRTLLR--TNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        MASACR++ +R S SS ++ LR  T S + + S+ F LP   S P+   FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQGT
Subjt:  MASACRRIASRISQSSFRTLLR--TNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT4G17310.2 unknown protein6.1e-1656.99Show/hide
Query:  MASACRRIASRISQSSFRTLLR--TNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACR++ +R S SS ++ LR  T S + + S+ F LP   S P+   FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQ
Subjt:  MASACRRIASRISQSSFRTLLR--TNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein4.2e-1752.58Show/hide
Query:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++ +R+          +SPA + S+ F +P K +A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.6 unknown protein4.2e-1752.58Show/hide
Query:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++ +R+          +SPA + S+ F +P K +A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.7 unknown protein4.2e-1752.58Show/hide
Query:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SSF++ +R+          +SPA + S+ F +P K +A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSFRTLLRT----------NSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGCTTGCCGAAGAATTGCGAGCAGAATCTCCCAATCTTCCTTCAGAACACTTCTCCGTACAAATTCTCCGGCCAAATCTCCATCTTCTTCGTTCCCTCTGCC
GCCTAAATCCTCTGCACCTTCCGTTAGCCGATTCTCTCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCGCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCCTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAA
mRNA sequenceShow/hide mRNA sequence
CAGTCGTGTCCAGTAGAATTTCCAGATCTCCTCTTTTTTCTTTCATGGCTTCTGCTTGCCGAAGAATTGCGAGCAGAATCTCCCAATCTTCCTTCAGAACACTTCTCCGT
ACAAATTCTCCGGCCAAATCTCCATCTTCTTCGTTCCCTCTGCCGCCTAAATCCTCTGCACCTTCCGTTAGCCGATTCTCTCTCGCCAGGTCTCCGTCGGAGCTGGGATG
CGTTCAATCGCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCCTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAATATC
AATTGTCAATATGCTTGAAAGAAATAGATTGGAAGTTTGTGGAGCTTTCCTATTATGGTGCAGTGTATCGATATCAAATGCATTTGATGGTACGTGAGACATATTTGCTG
TTTTTGAAGAGCTAGGTTTATCCGTTCCAAGGTGACTTAATTGGGCAGATCACTGCAGTGACAAAGGGATGTCAGCAATGGCTTAGTGGATTTCTTTTAAGTACTGTGAC
CAATTCTGCTCAATTTGTTTAACTAATTTTGATTATTCCATATTCAGAGTTGAAATAAGAATATAGTGATTCTAGTTCTCATGGCAACTCAGAAAACAATATTTTTCGCC
ATTGTTGTGGGTCATAAATGTTTGATCTTTGTCATAGATATGTATGTTTCTTATTTATTGAGATGCACATCATATTATTTTCTTTTGGCTTCCATGGAACAATATATCTT
GTAAACAAATGGCGGCTGTTTTTCTTACTACTAGAACAAGCAAGCCTACAAAATGAGGAATGACACACTTTGTACTATGAGCTTAAGAGATTATAACACCAAGGGTTGGG
AA
Protein sequenceShow/hide protein sequence
MASACRRIASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT