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CmoCh06G008740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G008740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase
Genome locationCmo_Chr06:4983118..4986223
RNA-Seq ExpressionCmoCh06G008740
SyntenyCmoCh06G008740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022850823.1 uncharacterized protein LOC111372673 [Olea europaea var. sylvestris]3.4e-0458.97Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D F++  DALW YRTAF TS+GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]4.0e-0564.1Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +KVVQPN +D  VK DDA+W YRTAF T +GMS YK +F
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]2.3e-0566.67Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +KVVQPN +D  VK DDALW YRTAF T +GMS YK +F
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

XP_024962094.1 uncharacterized protein LOC112502425 [Cynara cardunculus var. scolymus]2.6e-0458.97Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +KVV+PN +D   K DDALW YRT F T +GMS+YK +F
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

XP_024989324.1 uncharacterized protein LOC112523884 [Cynara cardunculus var. scolymus]3.4e-0461.54Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +KVV+PN +D   KFDDALW YRTAF T + MS YK +F
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

TrEMBL top hitse value%identityAlignment
A0A6P6SET8 uncharacterized protein LOC1136905526.2e-0456.41Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D  ++ DDALW YRTAF T +GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

A0A6P6VJZ0 uncharacterized protein LOC1137232956.2e-0456.41Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D  ++ DDALW YRTAF T +GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

A0A6P6WXZ3 uncharacterized protein LOC1137355116.2e-0456.41Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D  ++ DDALW YRTAF T +GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

A0A6P6WY65 uncharacterized protein LOC1137373296.2e-0456.41Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D  ++ DDALW YRTAF T +GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

A0A6P6X8T1 Reverse transcriptase6.2e-0456.41Show/hide
Query:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF
        +K V PN +D  ++ DDALW YRTAF T +GMS Y+ IF
Subjt:  QKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTACTTAGGAATCATGTTGGTCAATGATAGAAGCAGATTTGGAGTAGTATTTAAACTTAAACTTTGTTTCAAATATTGTAACAATGAGACTCAAAAAGTGGTACA
ACCTAATAATAGGGACGGATTTGTTAAGTTTGATGATGCATTATGGATTTACAGGACAGCTTTCATAACTTCCGTGGGGATGTCGGCTTACAAGCATATTTTTTTGGAAG
ATCATGCTTGTCCAAGACATGTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTACTTAGGAATCATGTTGGTCAATGATAGAAGCAGATTTGGAGTAGTATTTAAACTTAAACTTTGTTTCAAATATTGTAACAATGAGACTCAAAAAGTGGTACA
ACCTAATAATAGGGACGGATTTGTTAAGTTTGATGATGCATTATGGATTTACAGGACAGCTTTCATAACTTCCGTGGGGATGTCGGCTTACAAGCATATTTTTTTGGAAG
ATCATGCTTGTCCAAGACATGTTGTGTAA
Protein sequenceShow/hide protein sequence
MFYLGIMLVNDRSRFGVVFKLKLCFKYCNNETQKVVQPNNRDGFVKFDDALWIYRTAFITSVGMSAYKHIFLEDHACPRHVV