; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G008980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G008980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioninteractor of constitutive active ROPs 2, chloroplastic-like
Genome locationCmo_Chr06:5365032..5365347
RNA-Seq ExpressionCmoCh06G008980
SyntenyCmoCh06G008980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592244.1 Eukaryotic translation initiation factor 4B3, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0963.89Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ
        MDAAAL SAMNEVQRLK+QLNMVSES+ET+    NL      +Q         SDGIKAVE YNSLSL+LEQ
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ

KAG6596454.1 Interactor of constitutive active ROPs 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0747.79Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA
        MDAAAL SAMNEVQRLKVQLNMVSES ET                                       +  A N+  K       AKAA +K  SDGIKA
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA

Query:  VEVYNSLSLELEQ
        VEVYNSLSLELEQ
Subjt:  VEVYNSLSLELEQ

XP_022932528.1 uncharacterized protein LOC111439027 [Cucurbita moschata]3.1e-0963.89Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ
        MDAAAL SAMNEVQRLK+QLNMVSES+ET+    NL      +Q         SDGIKAVE YNSLSL+LEQ
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ

XP_023520720.1 uncharacterized protein LOC111784136 [Cucurbita pepo subsp. pepo]5.2e-0963.89Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ
        MDAAAL S MNEVQRLKVQLN+VSESD+TQ    NL      +Q         SDGIKAVE YNS SLELEQ
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ

XP_023540342.1 interactor of constitutive active ROPs 2, chloroplastic-like [Cucurbita pepo subsp. pepo]5.8e-0847.79Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA
        MDAAAL SAMNEVQRLKVQLNMVSESDET                                       +  A N+  K       AKAA +K  SDGIKA
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA

Query:  VEVYNSLSLELEQ
        VE YNSLSLELEQ
Subjt:  VEVYNSLSLELEQ

TrEMBL top hitse value%identityAlignment
A0A438IQ68 Interactor of constitutive active ROPs 2, chloroplastic2.0e-0642.5Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDETQ--------ITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ
        MD+AAL SAMNE+Q+LK+QL MV++S+ +Q        +  + L+++ +       A   +SDG+KA+E YNS++LEL+Q
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDETQ--------ITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ

A0A6J1CXH6 interactor of constitutive active ROPs 2, chloroplastic-like isoform X22.9e-0545.13Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESD----------------------ETQITAENLK-----LKPSTVQG------------KAKAAAKK--SDGIKA
        MDAAAL SAMNEVQRLK QL MVSES+                      ET    E LK      K S  Q              AKAA +K  SDG+KA
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESD----------------------ETQITAENLK-----LKPSTVQG------------KAKAAAKK--SDGIKA

Query:  VEVYNSLSLELEQ
        +E YNSLS+ELEQ
Subjt:  VEVYNSLSLELEQ

A0A6J1F1Z6 uncharacterized protein LOC1114390271.5e-0963.89Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ
        MDAAAL SAMNEVQRLK+QLNMVSES+ET+    NL      +Q         SDGIKAVE YNSLSL+LEQ
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ

A0A6J1G7A2 interactor of constitutive active ROPs 2, chloroplastic-like1.1e-0746.9Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA
        MDAAAL S MNEVQRLKVQLNMVSESDET                                       +  A N+  K       AKAA +K  SDGIKA
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA

Query:  VEVYNSLSLELEQ
        VE YNSLSLELEQ
Subjt:  VEVYNSLSLELEQ

A0A6J1L0F4 interactor of constitutive active ROPs 2, chloroplastic-like3.1e-0746.9Show/hide
Query:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA
        MDAAAL SAMNEVQRLKVQLNMVSESDET                                       +  A N+  K       AKAA +K  SD IKA
Subjt:  MDAAALTSAMNEVQRLKVQLNMVSESDET---------------------------------------QITAENLKLKPSTVQGKAKAAAKK--SDGIKA

Query:  VEVYNSLSLELEQ
        VE YNSLSLELEQ
Subjt:  VEVYNSLSLELEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGCTGCATTGACCTCCGCCATGAATGAAGTTCAGAGGCTCAAGGTCCAACTGAACATGGTGTCTGAATCCGACGAAACCCAAATTACTGCAGAGAATCTGAA
GCTCAAGCCCTCAACAGTGCAAGGAAAAGCCAAAGCAGCGGCGAAAAAGTCAGATGGAATCAAAGCTGTTGAAGTCTACAACTCTTTGTCATTAGAATTGGAGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTGCTGCATTGACCTCCGCCATGAATGAAGTTCAGAGGCTCAAGGTCCAACTGAACATGGTGTCTGAATCCGACGAAACCCAAATTACTGCAGAGAATCTGAA
GCTCAAGCCCTCAACAGTGCAAGGAAAAGCCAAAGCAGCGGCGAAAAAGTCAGATGGAATCAAAGCTGTTGAAGTCTACAACTCTTTGTCATTAGAATTGGAGCAATAA
Protein sequenceShow/hide protein sequence
MDAAALTSAMNEVQRLKVQLNMVSESDETQITAENLKLKPSTVQGKAKAAAKKSDGIKAVEVYNSLSLELEQ