| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7615234.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa] | 6.5e-242 | 58.36 | Show/hide |
Query: SLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCR
++PS LLQ++ D+F +E P LPP+ GIEH+IDF+PG +PNRPAYRTNP E +E+++QV+EL+ +G++RES+S C+VPV+LVPKKDGSWRMC+DCR
Subjt: SLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCR
Query: AINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------------
AIN IT+KYRHPIPRLDDMLDELHG S+F+K+DLKSGYHQI M GDEWKTAFKT+ GLYEWLVMPFGLTNAPSTFMRLMNH+LR ++
Subjt: AINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------------
Query: ---------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------------
VS++GV+VDEEKVK I++WP+ K++
Subjt: ---------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------------
Query: ---NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKE
NV F W + QE AF LKEKL+ AP+L+LP+F TFEIECDASGVGIGAVLMQ+++P+ +FSEKL GA+L YPTYDKE YALVRALQTWQHYLWPKE
Subjt: ---NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKE
Query: FIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYS
F+IHTDHESLKHL+ Q KLN++HA+W+EFIETF YVIKYK+ K+N+VADALSR REVVRLHG+PK+IVSDRD KFLS+FW+ LW KLGTKL++S
Subjt: FIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYS
Query: TTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKK
TTCHPQTDGQTEVV RT++ +LRA+I KN KTWEDCLP +EFAYN +HS +K +PF+IVYGFNP TP+DL+P+ E V+ D K E V ++H+Q KK
Subjt: TTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKK
Query: QIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQ
IE++ + A K RK IF GD VW+H RKERFP RKSKL+ R DGPF+VL+ IN+NAY +DL GKY VS +FNV DL F + D D R+NP Q
Subjt: QIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQ
Query: EGENDM
GE+D+
Subjt: EGENDM
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| OWM74668.1 hypothetical protein CDL15_Pgr005248 [Punica granatum] | 1.1e-249 | 50.11 | Show/hide |
Query: YFTNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGS
Y +N N LPS LLQEF+D+F + P LPP+RGIEH+IDFIPG PIPNRPAYR NP+EA+E+Q+QV ELL KGYVRES+S CSVPV+LVPKKDG+
Subjt: YFTNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGS
Query: WRMCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL----
WRMC+DCRA+NKIT+KYR+PIPRLDDMLDELHG ++F+KIDLKSGYHQI M GDEWKTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNH+LR Y+
Subjt: WRMCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL----
Query: -----------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI----------------------
VSS GVEVDEEKVKAI++WPT I
Subjt: -----------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI----------------------
Query: -----------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTW
V F WGK+QE AFNTLKEKLSSAPLL LP+F FEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L Y TYDKE YALVRAL+TW
Subjt: -----------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTW
Query: QHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRR--------------------------------------
QHYLW KEFIIHTDHESLKHL+ Q+KLNR+H +W+EFIE F YVI+YK+ KEN+VADALSRR
Subjt: QHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRR--------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEV
EVVRLHGIP++IVSDRDVKFLSHFWRVLWGKLGTKL++STTCHPQTDGQTEV
Subjt: ------------------------------------------------EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEV
Query: VKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRI
V RT+ +LRA+I +N K+WEDC+PFIEFAYNR +HS+TK +PFE+VYGFNPLTP+DL P+ E V+ D K E V K+H++ + I +N + ATR
Subjt: VKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRI
Query: KKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND-----MNH
KGRK F+PGDWVWVHFRKERF ++RKSKL PRGDGPFQVLE INDNAYK+DLPG+Y VS+TFNV DLS FDV G DSRTNP +EG ND H
Subjt: KKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND-----MNH
Query: DQRISIPQGPITRTRAKKLQ---QTLYIYIQAMVSSSKKILEDAGDLL
+ ++ I GPITR RAKKL+ Q L+ I SS+ D+G +L
Subjt: DQRISIPQGPITRTRAKKLQ---QTLYIYIQAMVSSSKKILEDAGDLL
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| PSS05945.1 Integrase [Actinidia chinensis var. chinensis] | 1.1e-246 | 48.64 | Show/hide |
Query: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
TN L+ +PS LLQEFED+F EMP LPP+RGIEH+IDF+PG IPNRPAYR+NP E +E+QRQVSELL KGYVRES+S C+VPV+LVPKKDG+WR
Subjt: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
Query: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
MC+DCRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI M GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILR ++
Subjt: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
Query: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWP---TLKNI---------------------
VS+ G+ VD EK++AI++WP T+ N+
Subjt: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWP---TLKNI---------------------
Query: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
NV F WG +QE AF +K++L++APLL+LPNF FEIECDASG+GIGAVLMQ RP+ +FSEKL+GA+L YPTYDKE YALVRAL+TW+H
Subjt: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
Query: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRR----------------------------------------
YLW +EF+IHTDHESLKHL+ Q+KLN++HA+W+EFIETF YVI+YKQ KEN+VADALSRR
Subjt: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRR----------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVK
E+VRLHG+P++IVSDRD KFLS+FW+ LWGKLGTKL++STTCHPQTDGQTEVV
Subjt: ----------------------------------------------EVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVK
Query: RTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKK
RT++ +LRAII KN KTWEDCLP +EFAYNR VHS TK +PFEIVYGFNPLTP+DL P+ E VN D K E V ++H++ K IE++ + A + K
Subjt: RTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKK
Query: GRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND-------MNH
GRK +F+PGDWVW+H RKERFPT+RKSKLLPRGDGPFQVLE INDNAYK+DLPG+Y VSATFN+ DLS F VGD LD RTNP QE END +
Subjt: GRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND-------MNH
Query: DQRISIPQGPITRTRAKKLQQTLYIYIQ---AMVSSSKKILEDAGDLLYMLCKVEVQE
I +P GPITR RAKK Q L IQ A S + I D ++ ++ ++VQE
Subjt: DQRISIPQGPITRTRAKKLQQTLYIYIQ---AMVSSSKKILEDAGDLLYMLCKVEVQE
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| TYK02449.1 F15O4.13 [Cucumis melo var. makuwa] | 3.4e-243 | 48.35 | Show/hide |
Query: QEFEDLFSKE-MPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKITIKY
+EF D+F E P+ LPPLRGIEH+IDFIPG +PN AYRTNP E +EIQRQV EL+ KGY+RES+S CSVPVILVPKKDG+WRMC+DCRAINKIT+KY
Subjt: QEFEDLFSKE-MPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKITIKY
Query: RHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREY----------------------
RHPIPRLDDMLDELHG +LF+KIDLKSGYHQI MH+GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNH+L+EY
Subjt: RHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREY----------------------
Query: -----------------------------------LVSSNGVEVDEEKVKAIKDWPTLKNI---------------------------------NVSFIW
+V +GV+VDEEKVKAI++WPT N +V F W
Subjt: -----------------------------------LVSSNGVEVDEEKVKAIKDWPTLKNI---------------------------------NVSFIW
Query: GKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHES
+ QE AFN LKEKL AP LALPNF+ +FEIECDASG+GIGAVLMQ ++P+MFFSEKL GA L Y TYDKE +ALVRAL+ WQHYLWPKEF+IHTDHES
Subjt: GKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHES
Query: LKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR--------------------------------------------------------
LKHL+ Q KLN++HAKW+EFIETF YVI YK+ K+N+VADALSR
Subjt: LKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR--------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMTAMLRAIIDK
REVVRLHGIPK+IVSDRDVKFLSHFW+VLWGKLGTKL++STTCHPQTDGQTEVV RT+ A+LR++I K
Subjt: --------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMTAMLRAIIDK
Query: NHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKIAIFKPGDWV
N K+WE+ LPF+EFAYNR +HSTT C+PFE+VYGFNPLTP+DL P+ F + A+++VE++ LHK++K++IEK+N K+ TR +GRK IFKPGDWV
Subjt: NHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKIAIFKPGDWV
Query: WVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVG-DGLDSRTNPSQEGENDMNH-DQRISIPQGPITRTRAKK
WVH RKERFP +RKSKL +GDGPFQVLE IN+NAYK+DL GKY VS+TFNV DL+ FDVG + LD RTNPS+E +D++ + + +P+GPIT+ +AKK
Subjt: WVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVG-DGLDSRTNPSQEGENDMNH-DQRISIPQGPITRTRAKK
Query: LQQTLYIYIQAMVSSSKKILEDAGDLLYMLCKVEVQE
+Q+ +++Q + ++ ++ LY + +E
Subjt: LQQTLYIYIQAMVSSSKKILEDAGDLLYMLCKVEVQE
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| TYK22420.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.6e-243 | 48.5 | Show/hide |
Query: EFEDLFSKE-MPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKITIKYR
EF D+F E P+ LPPLRGIEH+IDFIPG +PN AYRTNP E +EIQRQV EL+ KGY+RES+S CSVPVILVPKKDG+WRMC+DCRAINKIT+KYR
Subjt: EFEDLFSKE-MPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKITIKYR
Query: HPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREY-----------------------
HPIPRLDDMLDELHG +LF+KIDLKSGYHQI MH+GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTFMRLMNH+L+EY
Subjt: HPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREY-----------------------
Query: ----------------------------------LVSSNGVEVDEEKVKAIKDWPTLKNI---------------------------------NVSFIWG
+V +GV+VDEEKVKAI++WPT N +V F W
Subjt: ----------------------------------LVSSNGVEVDEEKVKAIKDWPTLKNI---------------------------------NVSFIWG
Query: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHESL
+ QE AFN LKEKL AP LALPNF+ +FEIECDASG+GIGAVLMQ ++P+MFFSEKL GA L Y TYDKE +ALVRAL+ WQHYLWPKEF+IHTDHESL
Subjt: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHESL
Query: KHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------------
KHL+ Q KLN++HAKW+EFIETF YVI YK+ K+N+VADALSR
Subjt: KHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMTAMLRAIIDKN
REVVRLHGIPK+IVSDRDVKFLSHFW+VLWGKLGTKL++STTCHPQTDGQTEVV RT+ A+LR++I KN
Subjt: -------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMTAMLRAIIDKN
Query: HKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVW
K+WE+ LPF+EFAYNR +HSTT C+PFE+VYGFNPLTP+DL P+ F + A+++VE++ LHK++K++IEK+N K+ TR +GRK IFKPGDWVW
Subjt: HKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVW
Query: VHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVG-DGLDSRTNPSQEGENDMNH-DQRISIPQGPITRTRAKKL
VH RKERFP +RKSKL RGDGPFQVLE IN+NAYK+DL GKY VS+TFNV DL+ FDVG + LD RTNPS+E +D++ + + +P+GPIT+ +AKK+
Subjt: VHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVG-DGLDSRTNPSQEGENDMNH-DQRISIPQGPITRTRAKKL
Query: QQTLYIYIQAMVSSSKKILEDAGDLLYMLCKVEVQE
Q+ +++Q + ++ ++ LY + +E
Subjt: QQTLYIYIQAMVSSSKKILEDAGDLLYMLCKVEVQE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9G001 Integrase catalytic domain-containing protein | 1.2e-257 | 54.75 | Show/hide |
Query: NPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCID
N SL S LLQEFED+F KEMP+ LPP+RGIEH+IDF+PG IPNRPAYR+NP+E +E+QRQV +L++KGYVRES+S C+VPV+LVPKKDG+WRMC+D
Subjt: NPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCID
Query: CRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYLVSSNGVEVDE
CRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI M GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR +EVDE
Subjt: CRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYLVSSNGVEVDE
Query: EKVKAIKDWPTLKNI--NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALV
EKVKAIK+WPT K+I NV F WG DQ+ AF T+KE+L SAP+LALPNF TFEIECDASG+GIGAVLMQ++RP+ FFSEKL+GASL+YPTYDKE YALV
Subjt: EKVKAIKDWPTLKNI--NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALV
Query: RALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------
RAL+TWQHYLWP+EF+IHTDHESLKHL+ Q KLN++HA+WLE+IETF YVI+YKQ KENIVADALSR
Subjt: RALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT
RE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL++STTCHPQT
Subjt: -----------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT
Query: DGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNF
DGQTEVV RT+T +LR ++ KN KTWEDCLPFIEFAYNR +HSTT +PFEIVYGFNPLTP+DL+P+ + D K E V LH++V+ QI ++N
Subjt: DGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNF
Query: KVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGENDMN
+VA++ KGR+ IF+PGDWVWVH RKERFP RK+KL PRGDGPFQ+LE INDNAYK+DLPG+Y VSATFNV DLS FDVG+ DS +NP +E ND N
Subjt: KVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGENDMN
Query: H-----DQRISIPQGPITRTRAKKLQQTLYIYIQAMVSSSKK
+ +P GPITR+RAKK+++ + +Q+ + K
Subjt: H-----DQRISIPQGPITRTRAKKLQQTLYIYIQAMVSSSKK
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| A0A2N9GQ39 Uncharacterized protein | 9.7e-260 | 54.41 | Show/hide |
Query: NPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCID
N SLPS LLQEFED+F +EMP+ LPP+RGIEH+IDF+PG IPNRPAYR+NP+E +E+QRQV +L++KGYVRES+S C+VPV+LVPKKDG+WRMC+D
Subjt: NPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCID
Query: CRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE------------
CRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI M GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR
Subjt: CRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE------------
Query: ---------------------------------------------YLVSSNGVEVDEEKVKAIKDWPTLKNI----------------------------
Y+V++ G+EVDEEKVKAIK+WPT K+I
Subjt: ---------------------------------------------YLVSSNGVEVDEEKVKAIKDWPTLKNI----------------------------
Query: -----NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWP
NV F WG DQ+ AF T+KE+L SAP+LALPNF FEIECDASG+GIGAVLMQ++RP+ FFSEKL+GASL+YPTYDKE YALVRAL+TWQHYLWP
Subjt: -----NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWP
Query: KEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------
+EF+IHTDHESLKHL+ Q KLN++HA+WLE+IETF YVI+YKQ KENIVADALSR
Subjt: KEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------
Query: --------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLV
RE+VRLHG+P+SIVSDRDVKFLS+FW+VLWGKLGTKL+
Subjt: --------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLV
Query: YSTTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQV
+STTCHPQTDGQTEVV RT+T +LR ++ KN KTWEDCLPFIEFAYNR +HSTT +PFEIVYGFNPLTP+DL+P+ + D K E V LH++V
Subjt: YSTTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQV
Query: KKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNP
+ QI ++N +VA++ KGR+ IF+PGDWVWVH RKERFP RK+KL PRGDGPFQ+LE INDNAYK+DLPG+Y VSATFNV DLS FDVG+ DS +NP
Subjt: KKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNP
Query: SQEGENDMNH-----DQRISIPQGPITRTRAKKLQQTLYIYIQAMVSSSKK
+E ND N + +P GPITR+RAKK+++ + +Q+ + K
Subjt: SQEGENDMNH-----DQRISIPQGPITRTRAKKLQQTLYIYIQAMVSSSKK
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| A0A2N9HVZ7 Reverse transcriptase | 4.1e-258 | 55.16 | Show/hide |
Query: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
TN L+ +LPS LLQE+ED+F +E P LPP+RGIEH+IDF+PG IPNRPAYR+NP+E +E+QRQVSELL KG+VRES+S C+VPV+LVPKKDG+WR
Subjt: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
Query: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
MC+DCRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI + GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR ++
Subjt: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
Query: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
VS+ G++VDEEKV+AI+DWP+ ++
Subjt: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
Query: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
NV F WG++QE AF +KEKL++APLL+LPNF TFEIECDASGVGIGAVLMQ RP+ +FSEKL+GA+L YPTYDKE YALVRAL+TWQH
Subjt: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
Query: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
YLWPKEF+IHTDHESLKHL+ Q+KLN++HA+W+EFIETF YVI+YKQ KEN+VADALSR
Subjt: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
Query: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
RE+VRLHG+P++IVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVV RT++
Subjt: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
Query: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
+LRAII KN KTWE+CLP +EFAYNR VHS TK +PFEIVYGFNPLTP+DL P+ E VN D K +FV ++H++ + IE++ + AT+ KGR+
Subjt: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
Query: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
+F+PGDWVW+H RKERFP +R+SKLLPRGDGPFQVLE INDNAYK+DLPG+Y VSATFNV DLS FDVGD D R NP QE ND + +P
Subjt: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
Query: QGPITRTRAKKLQQTLYIYIQAM
GP+TR RAKK + L IQ +
Subjt: QGPITRTRAKKLQQTLYIYIQAM
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| A0A2N9IKQ6 Reverse transcriptase | 4.1e-258 | 55.16 | Show/hide |
Query: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
TN L+ +LPS LLQE+ED+F +E P LPP+RGIEH+IDF+PG IPNRPAYR+NP+E +E+QRQVSELL KG+VRES+S C+VPV+LVPKKDG+WR
Subjt: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
Query: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
MC+DCRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI + GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR ++
Subjt: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
Query: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
VS+ G++VDEEKV+AI+DWP+ ++
Subjt: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
Query: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
NV F WG++QE AF +KEKL++APLL+LPNF TFEIECDASGVGIGAVLMQ RP+ +FSEKL+GA+L YPTYDKE YALVRAL+TWQH
Subjt: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
Query: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
YLWPKEF+IHTDHESLKHL+ Q+KLN++HA+W+EFIETF YVI+YKQ KEN+VADALSR
Subjt: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
Query: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
RE+VRLHG+P++IVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVV RT++
Subjt: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
Query: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
+LRAII KN KTWE+CLP +EFAYNR VHS TK +PFEIVYGFNPLTP+DL P+ E VN D K +FV ++H++ + IE++ + AT+ KGR+
Subjt: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
Query: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
+F+PGDWVW+H RKERFP +R+SKLLPRGDGPFQVLE INDNAYK+DLPG+Y VSATFNV DLS FDVGD D R NP QE ND + +P
Subjt: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
Query: QGPITRTRAKKLQQTLYIYIQAM
GP+TR RAKK + L IQ +
Subjt: QGPITRTRAKKLQQTLYIYIQAM
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| A0A2N9IM79 Reverse transcriptase | 4.1e-258 | 55.16 | Show/hide |
Query: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
TN L+ +LPS LLQE+ED+F +E P LPP+RGIEH+IDF+PG IPNRPAYR+NP+E +E+QRQVSELL KG+VRES+S C+VPV+LVPKKDG+WR
Subjt: TNMLNPSLPSDFFVLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWR
Query: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
MC+DCRAIN IT+KYRHPIPRLDDMLDELHG +F+KIDLKSGYHQI + GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNH+LR ++
Subjt: MCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILREYL------
Query: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
VS+ G++VDEEKV+AI+DWP+ ++
Subjt: ---------------------------------------------------VSSNGVEVDEEKVKAIKDWPTLKNI------------------------
Query: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
NV F WG++QE AF +KEKL++APLL+LPNF TFEIECDASGVGIGAVLMQ RP+ +FSEKL+GA+L YPTYDKE YALVRAL+TWQH
Subjt: ---------NVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQH
Query: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
YLWPKEF+IHTDHESLKHL+ Q+KLN++HA+W+EFIETF YVI+YKQ KEN+VADALSR
Subjt: YLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR-----------------------------------------
Query: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
RE+VRLHG+P++IVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVV RT++
Subjt: -----------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVKRTMT
Query: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
+LRAII KN KTWE+CLP +EFAYNR VHS TK +PFEIVYGFNPLTP+DL P+ E VN D K +FV ++H++ + IE++ + AT+ KGR+
Subjt: AMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHKQVKKQIEKQNFKVATRIKKGRKI
Query: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
+F+PGDWVW+H RKERFP +R+SKLLPRGDGPFQVLE INDNAYK+DLPG+Y VSATFNV DLS FDVGD D R NP QE ND + +P
Subjt: AIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHFDVGDGLDSRTNPSQEGEND----MNHDQRISIP
Query: QGPITRTRAKKLQQTLYIYIQAM
GP+TR RAKK + L IQ +
Subjt: QGPITRTRAKKLQQTLYIYIQAM
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 6.4e-51 | 30.21 | Show/hide |
Query: NMLNPSLPSDFF--------------VLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAE-EIQRQVSELLAKGYVRESLSLCS
N ++P L SD + LLQ++ D+ E L +H I+ P+ ++ +Y P+ E E++ Q+ ++L +G +R S S +
Subjt: NMLNPSLPSDFF--------------VLLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAE-EIQRQVSELLAKGYVRESLSLCS
Query: VPVILVPKKDGS-----WRMCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST
P+ +VPKK + +R+ ID R +N+IT+ RHPIP +D++L +L C+ FT IDL G+HQI M KTAF TK+G YE+L MPFGL NAP+T
Subjt: VPVILVPKKDGS-----WRMCIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPST
Query: FMRLMNHILRE---------------------------------------------------------YLVSSNGVEVDEEKVKAIKDWP----------
F R MN ILR ++++ +G++ + EK++AI+ +P
Subjt: FMRLMNHILRE---------------------------------------------------------YLVSSNGVEVDEEKVKAIKDWP----------
Query: -------------------------TLKNINVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASL
KN+ + + + AF LK +S P+L +P+F F + DAS V +GAVL Q+ PL + S L +
Subjt: -------------------------TLKNINVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASL
Query: RYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR
Y T +KE A+V A +T++HYL + F I +DH+ L L N + +W + F + IKY + KEN VADALSR
Subjt: RYPTYDKEFYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR
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| P0CT41 Transposon Tf2-12 polyprotein | 5.6e-47 | 27.9 | Show/hide |
Query: PSLPSDFFVLLQEFEDLFSKEMPSSLP-PLRGIEHKIDFIPGE---PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRM
P LP + +EF+D+ ++ LP P++G+E +++ PI N Y P + + + ++++ L G +RES ++ + PV+ VPKK+G+ RM
Subjt: PSLPSDFFVLLQEFEDLFSKEMPSSLP-PLRGIEHKIDFIPGE---PIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRM
Query: CIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE---------
+D + +NK +P+P ++ +L ++ G ++FTK+DLKS YH I + GDE K AF+ G++E+LVMP+G++ AP+ F +N IL E
Subjt: CIDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE---------
Query: ------------------------------------------------YLVSSNGVEVDEEKVKAIKDWPTLKN--------------------------
Y +S G +E + + W KN
Subjt: ------------------------------------------------YLVSSNGVEVDEEKVKAIKDWPTLKN--------------------------
Query: -------INVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQ-----RPLMFFSEKLTGASLRYPTYDKEFYALVRALQ
+V + W Q A +K+ L S P+L +F +E DAS V +GAVL Q P+ ++S K++ A L Y DKE A++++L+
Subjt: -------INVSFIWGKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQ-----RPLMFFSEKLTGASLRYPTYDKEFYALVRALQ
Query: TWQHYLWP--KEFIIHTDHESLKHLRVQNKL---NRQHAKWLEFIETFQYVIKYKQDKENIVADALSRREVVRLHGIPKSIVSDRDVKFLS
W+HYL + F I TDH +L R+ N+ N++ A+W F++ F + I Y+ N +ADALS R V IPK D + F++
Subjt: TWQHYLWP--KEFIIHTDHESLKHLRVQNKL---NRQHAKWLEFIETFQYVIKYKQDKENIVADALSRREVVRLHGIPKSIVSDRDVKFLS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.9e-51 | 32.1 | Show/hide |
Query: LLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKD-----GSWRMCIDCRAIN
LL +F +L KE L I+H ++ PI ++ Y E++ QV E+L +G +RES S + P +VPKK +R+ ID R +N
Subjt: LLQEFEDLFSKEMPSSLPPLRGIEHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKD-----GSWRMCIDCRAIN
Query: KITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE-----------------
+ITI R+PIP +D++L +L C FT IDL G+HQI M KTAF TK G YE+L MPFGL NAP+TF R MN+ILR
Subjt: KITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILRE-----------------
Query: ----------------------------------------YLVSSNGVEVDEEKVKAIKDWP-TLKNINVSFIWG-------------------------
++V+ +G++ + KVKAI +P K+ + G
Subjt: ----------------------------------------YLVSSNGVEVDEEKVKAIKDWP-TLKNINVSFIWG-------------------------
Query: ----KDQEL----AFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFI
Q+L AF LK + P+L LP+FE F + DAS + +GAVL QN P+ F S L L Y +KE A+V A +T++HYL ++F+
Subjt: ----KDQEL----AFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFI
Query: IHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRREVVRLH
I +DH+ L+ L + + +W + +Q+ I Y + KEN VADALSR ++ H
Subjt: IHTDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSRREVVRLH
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.2e-66 | 25.34 | Show/hide |
Query: LLQEFEDLFSKEMPSSLPPLRGI--EHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKIT
L Q++ ++ ++P + I +H I+ PG +P Y K +EI + V +LL ++ S S CS PV+LVPKKDG++R+C+D R +NK T
Subjt: LLQEFEDLFSKEMPSSLPPLRGI--EHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKIT
Query: IKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILR---------------------
I P+PR+D++L + +FT +DL SGYHQI M D +KTAF T G YE+ VMPFGL NAPSTF R M R
Subjt: IKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILR---------------------
Query: -------------------------------EYLVSSNGVEVD---EEKVKAIKDWPTLKNI------------------NVSFI-------------WG
E+L S G++ + K AI+D+PT K + N S I W
Subjt: -------------------------------EYLVSSNGVEVD---EEKVKAIKDWPTLKNI------------------NVSFI-------------WG
Query: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIH
+ Q+ A LK L ++P+L N ++ + + DAS GIGAVL + N+ L+ +FS+ L A YP + E +++AL +++ L K F +
Subjt: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIH
Query: TDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------
TDH SL L+ +N+ R+ +WL+ + T+ + ++Y +N+VADA+SR
Subjt: TDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVY
R + HG P++I SDRDV+ + ++ L +LG K
Subjt: -------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVY
Query: STTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHK---
S+ HPQTDGQ+E +T+ +LRA + N + W LP IEF YN T +PFEI G+ P TP I S + VN + VE L
Subjt: STTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHK---
Query: QVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDL
Q K+Q+E ++ T + RK + GD V VH R F K+ GPF+V++ INDNAY++DL
Subjt: QVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 8.4e-67 | 25.28 | Show/hide |
Query: LLQEFEDLFSKEMPSSLPPLRGI--EHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKIT
L Q++ ++ ++P + I +H I+ PG +P Y K +EI + V +LL ++ S S CS PV+LVPKKDG++R+C+D R +NK T
Subjt: LLQEFEDLFSKEMPSSLPPLRGI--EHKIDFIPGEPIPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSLCSVPVILVPKKDGSWRMCIDCRAINKIT
Query: IKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILR---------------------
I P+PR+D++L + +FT +DL SGYHQI M D +KTAF T G YE+ VMPFGL NAPSTF R M R
Subjt: IKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIHMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHILR---------------------
Query: -------------------------------EYLVSSNGVEVD---EEKVKAIKDWPTLKNI------------------NVSFI-------------WG
E+L S G++ + K AI+D+PT K + N S I W
Subjt: -------------------------------EYLVSSNGVEVD---EEKVKAIKDWPTLKNI------------------NVSFI-------------WG
Query: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIH
+ Q+ A + LK+ L ++P+L N ++ + + DAS GIGAVL + N+ L+ +FS+ L A YP + E +++AL +++ L K F +
Subjt: KDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKLTGASLRYPTYDKEFYALVRALQTWQHYLWPKEFIIH
Query: TDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------
TDH SL L+ +N+ R+ +WL+ + T+ + ++Y +N+VADA+SR
Subjt: TDHESLKHLRVQNKLNRQHAKWLEFIETFQYVIKYKQDKENIVADALSR---------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVY
R + HG P++I SDRDV+ + ++ L +LG K
Subjt: -------------------------------------------------------------REVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVY
Query: STTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHK---
S+ HPQTDGQ+E +T+ +LRA N + W LP IEF YN T +PFEI G+ P TP I S + VN + VE L
Subjt: STTCHPQTDGQTEVVKRTMTAMLRAIIDKNHKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPISSKEFVNFDANAKVEFVHKLHK---
Query: QVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHF
Q K+Q+E ++ T + RK + GD V VH R F K+ GPF+V++ INDNAY++DL NV L F
Subjt: QVKKQIEKQNFKVATRIKKGRKIAIFKPGDWVWVHFRKERFPTRRKSKLLPRGDGPFQVLEHINDNAYKIDLPGKYGVSATFNVVDLSHF
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