; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G009640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G009640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionethylene-responsive transcription factor 1-like
Genome locationCmo_Chr06:7555782..7556297
RNA-Seq ExpressionCmoCh06G009640
SyntenyCmoCh06G009640
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597005.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia]3.9e-8797.08Show/hide
Query:  MSSNSNCSQG---SSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY
        MSSNSNCSQG   SSSSEVFLLEWIRRHLLEDELD VGGLGKNTPSL SSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY
Subjt:  MSSNSNCSQG---SSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY

Query:  QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
        QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
Subjt:  QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

KAG7028473.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-7099.26Show/hide
Query:  VGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEAL
        VGGLGKNTPSL SSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEAL
Subjt:  VGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEAL

Query:  IGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
        IGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
Subjt:  IGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]2.6e-91100Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
        MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA

Query:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS
        EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS
Subjt:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]1.3e-8797.62Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
        MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELD VGGLGKNTPSL S DGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA

Query:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
        EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASP+SPPPLFSVKRPRTDSPSMPRC
Subjt:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

XP_023539438.1 ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]3.1e-8495.24Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
        MSSNSNCSQG SSSEVFLLEWIRRHLLEDELD VGGLGKNTPSL S DGVTD E PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA

Query:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
        EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCC+PKRASPDSPPPLFSVKRPRTDSP+MPRC
Subjt:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein3.0e-3256.6Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGKG--------------SSI--------------RGLQFRGV
        M S+S+ S   SSS++F LE IRRHLLED+      LGK +      DG+   DI   G G              SSI              RGLQFRGV
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGKG--------------SSI--------------RGLQFRGV

Query:  RRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS
        RRRPWGKYAAEIRDP++KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 135.4e-3458.6Show/hide
Query:  SSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGKG---------------SSI------------RGLQFRGVRR
        SS+S+ S   SSS++FLLE IRRHLLED+      LGK + +    DG+   DI   G G               SSI            RGLQFRGVRR
Subjt:  SSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGKG---------------SSI------------RGLQFRGVRR

Query:  RPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS
        RPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Subjt:  RPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS

A0A6J1DCJ3 ethylene-responsive transcription factor 14-like1.5e-3158.21Show/hide
Query:  SSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGS--SIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDR
        SS +  LLEWIR HLLE+++D       +  + A+++  ++ E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGS--SIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDR

Query:  AAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKR

A0A6J1GF81 ethylene-responsive transcription factor 1-like1.3e-91100Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
        MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA

Query:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS
        EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS
Subjt:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS

A0A6J1IH30 ethylene-responsive transcription factor 13-like6.5e-8897.62Show/hide
Query:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
        MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELD VGGLGKNTPSL S DGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA
Subjt:  MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTA

Query:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC
        EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASP+SPPPLFSVKRPRTDSPSMPRC
Subjt:  EEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRC

SwissProt top hitse value%identityAlignment
Q40476 Ethylene-responsive transcription factor 12.9e-2463.53Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPD
        RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T EEAA+AYD+AA++MRG+KA LNFPH IG  E    +     +RASP+
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPD

Q40479 Ethylene-responsive transcription factor 23.7e-2472.46Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY+TAEEAALAYD+AA++MRG+KA LNFPH IG  E
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE

Q84XB3 Ethylene-responsive transcription factor 11.8e-2348.72Show/hide
Query:  EVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQM
        + F + W   +L  +E+ L     +     A S  V+           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY++AEEAALAY +AAF+M
Subjt:  EVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQM

Query:  RGAKAKLNFPHMIGSAE
        RG KA LNFPH IG  E
Subjt:  RGAKAKLNFPHMIGSAE

Q8L9K1 Ethylene-responsive transcription factor 133.6e-2763.74Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD
        +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T E+AA+AYDRAAFQ+RG+KAKLNFPH+IGS        C Y      P+R SP+
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD

Q9LW50 Ethylene-responsive transcription factor 23.7e-2472.46Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY+TAEEAALAYD+AA++MRG+KA LNFPH IG  E
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein2.7e-2257Show/hide
Query:  SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRA--------SPDSPPP
        S+ R   +RGVR+RPWGK+AAEIRDPN K AR+WLGT+ TAEEAALAYD+AAF+ RG KAKLNFP  I      +     YP  A        +P SPPP
Subjt:  SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRA--------SPDSPPP

AT2G44840.1 ethylene-responsive element binding factor 132.6e-2863.74Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD
        +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY+T E+AA+AYDRAAFQ+RG+KAKLNFPH+IGS        C Y      P+R SP+
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCY------PKRASPD

AT4G17500.1 ethylene responsive element binding factor 18.5e-2465.28Show/hide
Query:  SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE
        ++ +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT++TAE+AALAYDRAAF+MRG++A LNFP  + S E
Subjt:  SSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE

AT5G47220.1 ethylene responsive element binding factor 21.6e-2260.53Show/hide
Query:  PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE
        P   ++++   +RGVR+RPWGK+AAEIRDP + GAR+WLGT++TAE+AALAYD AAF+MRG++A LNFP  + S E
Subjt:  PGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAE

AT5G61600.1 ethylene response factor 1043.2e-2361.11Show/hide
Query:  FRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIG------SAEALIGIGCCYPKRASPDSPP
        +RGVRRRPWGKYAAEIRDPN+KG RIWLGTY TA EA  AYD+AAFQ+RG KA LNFP  +       S E +IG+G    ++    SPP
Subjt:  FRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIG------SAEALIGIGCCYPKRASPDSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGTAACAGCAATTGCTCACAAGGGTCGTCGTCGTCGGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGATTTGGTTGGGGGATT
AGGGAAAAATACTCCGAGTTTGGCGAGTAGTGATGGGGTTACGGATATCGAGGCCCCTGGGAAGGGGAGTTCGATAAGAGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGC
CATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAATAGAAAAGGGGCTCGCATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGATCGAGCT
GCTTTTCAAATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGGATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTGA
TTCCCCTCCGCCCCTGTTCAGCGTCAAGCGCCCTAGAACTGACTCGCCCTCAATGCCACGATGTTCAACTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGTAACAGCAATTGCTCACAAGGGTCGTCGTCGTCGGAGGTGTTTCTGTTGGAGTGGATTCGGCGACATCTTTTGGAGGACGAGTTGGATTTGGTTGGGGGATT
AGGGAAAAATACTCCGAGTTTGGCGAGTAGTGATGGGGTTACGGATATCGAGGCCCCTGGGAAGGGGAGTTCGATAAGAGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGC
CATGGGGGAAGTACGCAGCAGAGATCAGAGACCCCAATAGAAAAGGGGCTCGCATATGGCTGGGGACATACCAGACCGCTGAAGAGGCTGCTTTGGCTTACGATCGAGCT
GCTTTTCAAATGCGGGGAGCCAAGGCCAAGCTCAACTTTCCTCACATGATTGGTTCCGCGGAGGCGCTGATTGGGATAGGCTGCTGTTACCCTAAGCGCGCTTCCCCTGA
TTCCCCTCCGCCCCTGTTCAGCGTCAAGCGCCCTAGAACTGACTCGCCCTCAATGCCACGATGTTCAACTTCATAA
Protein sequenceShow/hide protein sequence
MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVTDIEAPGKGSSIRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYDRA
AFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRTDSPSMPRCSTS