; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G009800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G009800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr06:7723365..7725462
RNA-Seq ExpressionCmoCh06G009800
SyntenyCmoCh06G009800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51411.1 hypothetical protein Csa_007923 [Cucumis sativus]7.8e-2580.72Show/hide
Query:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKE
        MKS    SSVEALRN GEGIAS+LSS D SR LLATRPPRQVVSI TCSKLC +CFV GVVVGYSLKR VNRW+SKLLRRLK+
Subjt:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKE

XP_022956291.1 uncharacterized protein LOC111458016 [Cucurbita moschata]3.7e-35100Show/hide
Query:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
Subjt:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

XP_022974252.1 uncharacterized protein LOC111472885 [Cucurbita maxima]6.0e-3395.18Show/hide
Query:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKSAALPSSVEALR+GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV+VGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

XP_023540347.1 uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo]8.3e-3598.8Show/hide
Query:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLK+D
Subjt:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

XP_038893067.1 uncharacterized protein LOC120081950 [Benincasa hispida]5.8e-2886.9Show/hide
Query:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKS    SSVE LRN GEGIASALSSSDQSRLLLATRPPRQVVSI TCSKLC +CFVAGVVVGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

TrEMBL top hitse value%identityAlignment
A0A0A0KUK2 Uncharacterized protein3.8e-2580.72Show/hide
Query:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKE
        MKS    SSVEALRN GEGIAS+LSS D SR LLATRPPRQVVSI TCSKLC +CFV GVVVGYSLKR VNRW+SKLLRRLK+
Subjt:  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKE

A0A314Z6R0 Uncharacterized protein2.6e-1862.96Show/hide
Query:  SAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        S++  SS ++ R GEG+A+ALSSSDQSR+L   RP R VVS+ TCSKLC +CFVAG+VVGY+LKRRV RW S+LL+R+K++
Subjt:  SAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

A0A6J1GW53 uncharacterized protein LOC1114580161.8e-35100Show/hide
Query:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
Subjt:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

A0A6J1I9S5 uncharacterized protein LOC1114728852.9e-3395.18Show/hide
Query:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        MKSAALPSSVEALR+GEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGV+VGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

W9RT53 Uncharacterized protein2.0e-1867.47Show/hide
Query:  KSAALPSSV-EALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        KSA+  SS  +  R  EGI++ALSS DQSRLL+ +RPPR VVS+ TCSKLC ICFV GVVVGY+LKRRV RW S+LL+RLK+D
Subjt:  KSAALPSSV-EALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19240.1 unknown protein1.1e-1370.59Show/hide
Query:  LATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED
        L TRPP   VS+ TCSKLC + FVAGV VGY+LKRRV RW SKLLRR+K+D
Subjt:  LATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGGCGGCGTTACCTTCTTCAGTGGAAGCTTTGAGAAATGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCCGATCAGTCTCGTCTATTGCTTGCCACTAGACC
TCCCAGGCAAGTAGTATCGATATTAACTTGTTCAAAGCTATGTGGTATTTGCTTTGTTGCCGGGGTGGTGGTTGGTTACTCGTTAAAGCGACGCGTGAATCGATGGGTTT
CCAAGCTATTGAGGAGATTAAAAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCATGCCATTCCCACCCTCTTCTTCCACAATTCAAACGGCTCCTAAACCCTACTTTGTATTTCTCTCTCTCTTTTTCAAGTCCGACGGCAGAAATGAAATCGGCGGCG
TTACCTTCTTCAGTGGAAGCTTTGAGAAATGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCCGATCAGTCTCGTCTATTGCTTGCCACTAGACCTCCCAGGCAAGTAGT
ATCGATATTAACTTGTTCAAAGCTATGTGGTATTTGCTTTGTTGCCGGGGTGGTGGTTGGTTACTCGTTAAAGCGACGCGTGAATCGATGGGTTTCCAAGCTATTGAGGA
GATTAAAAGAGGATTGATAAGTCCATCCCTTTGTTCTGGGCAGAGTAGAGAGAAGGTTGAACAAACCTGTCCGTTTCCAAGGGCTGTTCATGTGAGGATTGGCTTTATGA
GTTTCAAGATTTGATGCTTTTTTGAAACCTTCTCTCTTTTGCAATCTTTTCTCAGCTATGGTGGTGTGGATAAACCCACTTTTATAATGGTCAATGTTGTTTGTTGATAA
ATGATCAATATTAGGTCTCCAATATTTGCCATATTTAGAGGTGGTAGGAAATACCCTGTCATGTCATTCCTCTATTGGAGGTCATTCCATACATGTGAATGCAATGACGT
GCCCATCATTTCAATCTATTTTCTTATAATGCTATCTTAATGGTAAGTTGGATGTGTACCATATACTCTACACACAACCCATACCCATACGAGCGAGTATGGACTTACTA
GTTAGTTTGCATACCGTTAGGCCACTTTTCTTGTTGGGCGAGCATACTATGGGAGCTCCTTAGGCCGACCACCCGTTAGAACTAGTAACCGTCCTGACAATATTAGGTTA
ACATAATGATCGTTTTTCTGCCTGACCAGAACTAGTCATCGTCACAACAACATTAGGTTAACATAATGATCTTTTTTGTGCCGGACTATCGCAGCATTATGATAAATATA
ATGATTGTTCTCCTGTCTCGTAATGTATGCGTTTGTACTATCGTGAAGGGCTAGGCATATCGCTCAATACATGAGCACATAATAATGCATGAGGTCTCAACATTTTTA
Protein sequenceShow/hide protein sequence
MKSAALPSSVEALRNGEGIASALSSSDQSRLLLATRPPRQVVSILTCSKLCGICFVAGVVVGYSLKRRVNRWVSKLLRRLKED