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CmoCh06G009810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G009810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Genome locationCmo_Chr06:7725854..7726228
RNA-Seq ExpressionCmoCh06G009810
SyntenyCmoCh06G009810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054191.1 hypothetical protein E6C27_scaffold131G001270 [Cucumis melo var. makuwa]2.4e-2277.03Show/hide
Query:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH
        MGGGG I MV+VR R R+DPV+ LLADKVDAESNE DAEAR GM+ELIG+H MLPP + PPEELS RSQRLIRH
Subjt:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH

KAB1208638.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Morella rubra]8.1e-1053.01Show/hide
Query:  MDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL
        M+ V+ LLAD+VD+E N+ DAEARSG+++LI +HR+LPPLV PPEELS  SQ LI H  +  + L L    S+  G D   LL
Subjt:  MDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL

KAB2627647.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Pyrus ussuriensis x Pyrus communis]1.3e-1058.9Show/hide
Query:  GGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH
        GGGG        G    + V+ LLAD+VDAE NESDA+A  G++ELIGEHRMLPPLV PPEEL  R Q   RH
Subjt:  GGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH

KAG6597022.1 hypothetical protein SDJN03_10202, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5999.19Show/hide
Query:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL
        MGGGGSISMVMVRGRRRMDPVIYLLA+KVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL
Subjt:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL

Query:  SSLFSLPSYYFKLLYYPLILFLDL
        SSLFSLPSYYFKLLYYPLILFLDL
Subjt:  SSLFSLPSYYFKLLYYPLILFLDL

RDX82049.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, partial [Mucuna pruriens]5.3e-0943.52Show/hide
Query:  VRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLLSSLFSLPSYYF
        VR RRR++ V+ L  D+V+A+ +E DA+AR G++ELI +HRMLPP + PPEEL     R   H  +  +S SL  F +        FL  S FS    +F
Subjt:  VRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLLSSLFSLPSYYF

Query:  KLLYYPLI
        KLL++P I
Subjt:  KLLYYPLI

TrEMBL top hitse value%identityAlignment
A0A0A0KP64 Uncharacterized protein1.2e-2277.03Show/hide
Query:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH
        MGGGG I MV+VR RRR+DPV+ LLADKVDAESNE DAEARSG++ELIG+H MLPP + PPEELS RSQRLI H
Subjt:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH

A0A371FUN4 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (Fragment)2.5e-0943.52Show/hide
Query:  VRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLLSSLFSLPSYYF
        VR RRR++ V+ L  D+V+A+ +E DA+AR G++ELI +HRMLPP + PPEEL     R   H  +  +S SL  F +        FL  S FS    +F
Subjt:  VRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLLSSLFSLPSYYF

Query:  KLLYYPLI
        KLL++P I
Subjt:  KLLYYPLI

A0A5A7UKX3 Uncharacterized protein1.2e-2277.03Show/hide
Query:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH
        MGGGG I MV+VR R R+DPV+ LLADKVDAESNE DAEAR GM+ELIG+H MLPP + PPEELS RSQRLIRH
Subjt:  MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH

A0A5N5HLF1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase6.1e-1158.9Show/hide
Query:  GGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH
        GGGG        G    + V+ LLAD+VDAE NESDA+A  G++ELIGEHRMLPPLV PPEEL  R Q   RH
Subjt:  GGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRH

A0A6A1V9T8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic3.9e-1053.01Show/hide
Query:  MDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL
        M+ V+ LLAD+VD+E N+ DAEARSG+++LI +HR+LPPLV PPEELS  SQ LI H  +  + L L    S+  G D   LL
Subjt:  MDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGGAGGAAGCATCAGCATGGTGATGGTGAGAGGAAGAAGGAGAATGGATCCTGTTATATACTTGCTCGCCGACAAGGTAGATGCCGAAAGCAACGAGAGCGA
TGCCGAGGCCAGGAGTGGCATGTCGGAACTGATTGGAGAGCATCGGATGCTTCCTCCACTCGTCTGTCCTCCTGAAGAACTCTCCAGTCGATCCCAAAGGCTTATTCGCC
ATTGCAAAACAGCTCTGATTTCCCTTTCCTTGCGCTCCTTCACCTCGTCCTGGATGGGTGCAGATCGCCACTTCCTCCTGTCCTCGCTTTTCAGCCTTCCCAGCTACTAC
TTCAAATTACTATATTACCCTTTAATTTTGTTTCTGGATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCGGAGGAAGCATCAGCATGGTGATGGTGAGAGGAAGAAGGAGAATGGATCCTGTTATATACTTGCTCGCCGACAAGGTAGATGCCGAAAGCAACGAGAGCGA
TGCCGAGGCCAGGAGTGGCATGTCGGAACTGATTGGAGAGCATCGGATGCTTCCTCCACTCGTCTGTCCTCCTGAAGAACTCTCCAGTCGATCCCAAAGGCTTATTCGCC
ATTGCAAAACAGCTCTGATTTCCCTTTCCTTGCGCTCCTTCACCTCGTCCTGGATGGGTGCAGATCGCCACTTCCTCCTGTCCTCGCTTTTCAGCCTTCCCAGCTACTAC
TTCAAATTACTATATTACCCTTTAATTTTGTTTCTGGATTTATAA
Protein sequenceShow/hide protein sequence
MGGGGSISMVMVRGRRRMDPVIYLLADKVDAESNESDAEARSGMSELIGEHRMLPPLVCPPEELSSRSQRLIRHCKTALISLSLRSFTSSWMGADRHFLLSSLFSLPSYY
FKLLYYPLILFLDL