; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G009960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G009960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:7827399..7828019
RNA-Seq ExpressionCmoCh06G009960
SyntenyCmoCh06G009960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]4.6e-4558.54Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFT                                           R +
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
        G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI+SKT+WCK++EARK R R
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]1.5e-4356.71Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFT                                           R +
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
        G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI++KT+WCK++E+RK R R
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR

KAG7028512.1 hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-6578.66Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLS                                   NY
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
        GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]3.0e-6073.94Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFT                                           RNY
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
        GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]1.5e-5973.33Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFT                                           R Y
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
        GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein5.4e-3953.66Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFT                                              
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
             RVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI++KT+WCK++E+RK R R
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR

A0A5A7U0U8 Uncharacterized protein2.2e-4558.54Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFT                                           R +
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR
        G+CIERVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI+SKT+WCK++EARK R R
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFR

A0A6J1E9T6 uncharacterized protein LOC1114320885.7e-4156.96Show/hide
Query:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERV
        NG   LNP AKEW+P+ D APEEDRCLFLTFSNG PL+EHQIV+FFT                                           R +G+CIERV
Subjt:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERV

Query:  YVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
        YVHY +GG + PLFGKVVFVASSIPAIIL GKDEAKFSIES+T+WCKRYEARK R+R+
Subjt:  YVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV

A0A6J1FZ16 uncharacterized protein LOC1114491941.5e-6073.94Show/hide
Query:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY
        MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFT                                           RNY
Subjt:  MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNY

Query:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
        GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
Subjt:  GSCIERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV

A0A6J1IWW8 uncharacterized protein LOC1114792142.2e-4056.33Show/hide
Query:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERV
        NG   LNP AKEW+P+ D APEEDRCLFLTFSNG PL+EHQIV+FFT                                           R +G+CIERV
Subjt:  NGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERV

Query:  YVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV
        YVHY +GG + PLFGKVVFVASSIPAIIL GKDEAKF IES+T+WCKRYEARK R+R+
Subjt:  YVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64870.1 unknown protein2.2e-0523.97Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERVYVHYPDGGT----------
        A +++R +FLTFS G P+S  ++++ FT               ++GE                             C+E VY+   DGG           
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERVYVHYPDGGT----------

Query:  --QLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARK
          Q PLF K+V  +      IL G+++ K+ I  K +W ++++  K
Subjt:  --QLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARK

AT5G11220.1 unknown protein3.2e-0423.4Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYG-SCIERVYV----------HYPDGG
        A + +R +F+TFS G P+S+ ++  FFT                                           +NYG +C+E VY+          +  D G
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYG-SCIERVYV----------HYPDGG

Query:  TQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRY
         Q  LF K+V  + +    IL G+   +F    K +W ++Y
Subjt:  TQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRY

AT5G13620.1 unknown protein4.5e-0625.19Show/hide
Query:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERVYVHYPDGGTQLPLFGKVVF
        A E+DR +FLTFS G PLSE ++  +FT                                           R +G  IE + +   +G  Q      V+ 
Subjt:  APEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERVYVHYPDGGTQLPLFGKVVF

Query:  VASSIPAIILGGKDEAKFSIESKTLWCKRYEARKT
         A+ IP I+  G +  K++I  K +W ++Y  R +
Subjt:  VASSIPAIILGGKDEAKFSIESKTLWCKRYEARKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCCTTCAGGGCTTTAATGGCGCTGATCATTTGAACCCTCAGGCCAAAGAATGGAACCCTCTTTTCGATTGCGCTCCCGAGGAAGATCGCTGCCTCTTTCTCAC
TTTCTCGAATGGAAACCCGCTCTCGGAACACCAAATTGTTAACTTCTTCACTCGGTACGCCCTTTCTAACCTTCTTTCTCGAAGGTGTTCTCTAAGAGTTTTTGGCGAAC
GAAAAACGAAGCTCTCGTTATTTCGATTTCGTTTCGTTATTGAATCTTCTTCGCTTTTAATTGATATAAACAGAAACTACGGGTCGTGCATCGAAAGGGTATACGTGCAT
TATCCGGACGGAGGGACTCAATTGCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTTCAATACCAGCAATAATTCTAGGAGGAAAAGACGAAGCCAAGTTTTCGATTGA
GAGCAAGACGTTATGGTGTAAGAGATACGAGGCTCGAAAAACTCGATTTAGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCCTTCAGGGCTTTAATGGCGCTGATCATTTGAACCCTCAGGCCAAAGAATGGAACCCTCTTTTCGATTGCGCTCCCGAGGAAGATCGCTGCCTCTTTCTCAC
TTTCTCGAATGGAAACCCGCTCTCGGAACACCAAATTGTTAACTTCTTCACTCGGTACGCCCTTTCTAACCTTCTTTCTCGAAGGTGTTCTCTAAGAGTTTTTGGCGAAC
GAAAAACGAAGCTCTCGTTATTTCGATTTCGTTTCGTTATTGAATCTTCTTCGCTTTTAATTGATATAAACAGAAACTACGGGTCGTGCATCGAAAGGGTATACGTGCAT
TATCCGGACGGAGGGACTCAATTGCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTTCAATACCAGCAATAATTCTAGGAGGAAAAGACGAAGCCAAGTTTTCGATTGA
GAGCAAGACGTTATGGTGTAAGAGATACGAGGCTCGAAAAACTCGATTTAGAGTTTAG
Protein sequenceShow/hide protein sequence
MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRYALSNLLSRRCSLRVFGERKTKLSLFRFRFVIESSSLLIDINRNYGSCIERVYVH
YPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRFRV