CuGenDBv2

Gene ID	CmoCh06G010180
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Genome location	Cmo_Chr06:7991868..7994005
RNA-Seq Expression	CmoCh06G010180
Synteny	CmoCh06G010180
Gene Ontology terms	GO:0032774 - RNA biosynthetic process (biological process) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597058.1 hypothetical protein SDJN03_10238, partial [Cucurbita argyrosperma subsp. sororia]

8.6e-162

99.67

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

XP_022945677.1 DNA-directed RNA polymerase II subunit 1-like [Cucurbita moschata]

3.8e-162

100

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

XP_022974813.1 DNA-directed RNA polymerase II subunit 1-like isoform X1 [Cucurbita maxima]

1.1e-156

97.37

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRP TAPR DVPPPAATSEPEV+ SAP TANVLQTSPIKERSPRITSPVRKY SPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSA ASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

XP_022974814.1 DNA-directed RNA polymerase II subunit 1-like isoform X2 [Cucurbita maxima]

9.8e-158

97.7

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRP TAPR DVPPPAATSEPEV+ SAP TANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSA ASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

XP_023538835.1 proline-rich extensin-like protein EPR1 [Cucurbita pepo subsp. pepo]

1.2e-158

97.7

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAA SEPEVYP  PRTANVLQTSPIKERSPRI SPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERR+SALASPKTFKTTYTSPPRSPAKHKYSTST+QAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AVJ6 microtubule-associated protein RP/EB family member 1-like

2.2e-107

70.55

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPP-AATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNR
        M+NLPRFGRTWNRFSSLPRP TA R +  P   A +EPEV+PSA  T N LQTSP+K+R+PR++SPV+K+PSPP+SPKY  A  + SPRKPLSPP TYNR
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPP-AATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNR

Query:  YDGERRSSALASPKTFKTTYTSPPRSPAKHKYST-STVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHR-ASEYSSGKPQ
        +DGERR+SA  SPKTFK TY SPP SP K K+ST +TV APLSPLALP  E R EPE  +RPRSPPE++QK +LYQ TT+EKP KTD+R   +Y + KPQ
Subjt:  YDGERRSSALASPKTFKTTYTSPPRSPAKHKYST-STVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHR-ASEYSSGKPQ

Query:  QKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH
        QKQ HQQ QSDVINIKG+NVGAVMHITQSSD +E  KKKP+V  S ENE+ +NKS+SN PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLA+ +K P H
Subjt:  QKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH

Query:  ADSVHDSRH
         DS+H+SRH
Subjt:  ADSVHDSRH

A0A5A7TZ60 Microtubule-associated protein RP/EB family member 1-like

2.2e-107

70.55

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPP-AATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNR
        M+NLPRFGRTWNRFSSLPRP TA R +  P   A +EPEV+PSA  T N LQTSP+K+R+PR++SPV+K+PSPP+SPKY  A  + SPRKPLSPP TYNR
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPP-AATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNR

Query:  YDGERRSSALASPKTFKTTYTSPPRSPAKHKYST-STVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHR-ASEYSSGKPQ
        +DGERR+SA  SPKTFK TY SPP SP K K+ST +TV APLSPLALP  E R EPE  +RPRSPPE++QK +LYQ TT+EKP KTD+R   +Y + KPQ
Subjt:  YDGERRSSALASPKTFKTTYTSPPRSPAKHKYST-STVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHR-ASEYSSGKPQ

Query:  QKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH
        QKQ HQQ QSDVINIKG+NVGAVMHITQSSD +E  KKKP+V  S ENE+ +NKS+SN PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLA+ +K P H
Subjt:  QKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH

Query:  ADSVHDSRH
         DS+H+SRH
Subjt:  ADSVHDSRH

A0A6J1G1L2 DNA-directed RNA polymerase II subunit 1-like

1.9e-162

100

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

A0A6J1IEX0 DNA-directed RNA polymerase II subunit 1-like isoform X2

4.7e-158

97.7

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRP TAPR DVPPPAATSEPEV+ SAP TANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSA ASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

A0A6J1IHF4 DNA-directed RNA polymerase II subunit 1-like isoform X1

5.2e-157

97.37

Show/hide

Query:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
        MANLPRFGRTWNRFSSLPRP TAPR DVPPPAATSEPEV+ SAP TANVLQTSPIKERSPRITSPVRKY SPPTSPKYRAAAPSTSPRKPLSPPPTYNRY
Subjt:  MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRY

Query:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
        DGERRSSA ASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEP+VRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ
Subjt:  DGERRSSALASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQ

Query:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
        THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH
Subjt:  THQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVH

Query:  DSRH
        DSRH
Subjt:  DSRH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G75260.1 oxidoreductases, acting on NADH or NADPH

4.6e-04

34.04

Show/hide

Query:  VINIKGENVGAVMHITQSSDAT--ETH----------KKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF
        V  + GEN GA M I    D    E H          +   T +  +EN KD +++       +++N N QG+NNSI+  SS+S  DPG+H++F
Subjt:  VINIKGENVGAVMHITQSSDAT--ETH----------KKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF

AT2G46630.1 unknown protein

4.1e-13

28.85

Show/hide

Query:  PRPGTAPRLDVPPPAATSEP--EVYPSAPRTANVLQTSPIKERSPRITSPVRKYP--------SPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRSS
        PRP +   L V PPA    P  +  P +P       + P +++ P +T P +K P        SP  SP  R  +P T P+    PPP         RSS
Subjt:  PRPGTAPRLDVPPPAATSEP--EVYPSAPRTANVLQTSPIKERSPRITSPVRKYP--------SPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRSS

Query:  ALASPKTFKTTYTSPPR---SPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSP-----------PEVQQKSVLYQKTTSEKPAKTDHRAS----
          + P   +     PPR   SP    +S+ +  +       PS  + H   P  R  SP            E  QK++L  + TS+      H  +    
Subjt:  ALASPKTFKTTYTSPPR---SPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSP-----------PEVQQKSVLYQKTTSEKPAKTDHRAS----

Query:  -----------EYSSGKPQQ----KQTHQQQSD----------VINIKGENVGAVMHITQSSDATET-----------------HKKKPTVSYSSENEKD
                    Y+  +  Q    K+ H+Q S           VI I GEN GAVM I +S    +T                  ++  + S SS +E +
Subjt:  -----------EYSSGKPQQ----KQTHQQQSD----------VINIKGENVGAVMHITQSSDATET-----------------HKKKPTVSYSSENEKD

Query:  S---------NKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDS
                  NK +SN+P K+FMNSN Q +NNSI+YNS+ SH DPG+HL  ++KP   +  H S
Subjt:  S---------NKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCGCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCACGTCGGAGCC
GGAAGTTTATCCATCGGCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCACTTCTCCGGTTAGGAAATATCCCTCGCCTCCTA
CTTCTCCCAAATATAGGGCGGCTGCCCCTAGCACTTCACCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGAGCAGTGCTTTAGCT
TCTCCCAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAGCATAAATATTCCACCTCCACTGTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAG
CTTGGAGAAGAGACATGAACCTGAGCCAGTGGTTCGACCCAGGAGCCCACCGGAGGTCCAACAGAAATCCGTCCTTTACCAGAAGACTACCAGCGAGAAGCCTGCGAAAA
CCGACCATCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAACAAACGCATCAGCAGCAAAGTGATGTAATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATG
CACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGG
AAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCA
CCCATGCCGATTCTGTTCATGATTCGAGGCACTGA

mRNA sequence

Show/hide mRNA sequence

TCTTCTCCAATTTTTAAAAAATTTTCAATATTTGTAATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCGCTGCCCCGCCCTGGCACGGCCCCACG
GCTTGATGTTCCGCCGCCGGCTGCCACGTCGGAGCCGGAAGTTTATCCATCGGCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAA
TCACTTCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCTAGCACTTCACCCCGCAAGCCACTATCTCCTCCTCCGACGTATAAC
CGTTACGACGGAGAACGGCGGAGCAGTGCTTTAGCTTCTCCCAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAGCATAAATATTCCACCTCCAC
TGTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCAGTGGTTCGACCCAGGAGCCCACCGGAGGTCCAACAGAAATCCGTCC
TTTACCAGAAGACTACCAGCGAGAAGCCTGCGAAAACCGACCATCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAACAAACGCATCAGCAGCAAAGTGATGTA
ATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGA
GAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTG
ATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCGAGGCACTGAATGGACCGACCTCATCATTACCACTCTCTTATTTGGTGT
CATATGCTAAAATAATTATGAAATAAAGCAACGATATTATAATAATTAAAGCATTTTATATTCATATTCACCATTCATATGGGATGTATTTTCAAATGGTTTTAACCATT
TGGAAAAAAAAAAAAAGAGTGATTAATAATAAAACCTATTTTCAGATTATTCTATCCATTCAAAC

Protein sequence

Show/hide protein sequence

MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAATSEPEVYPSAPRTANVLQTSPIKERSPRITSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRSSALA
SPKTFKTTYTSPPRSPAKHKYSTSTVQAPLSPLALPSLEKRHEPEPVVRPRSPPEVQQKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVM
HITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDSRH

CmoCh06G010180 (gene) of Cucurbita moschata (Rifu) v1 genome