; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G010830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G010830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationCmo_Chr06:8359056..8360874
RNA-Seq ExpressionCmoCh06G010830
SyntenyCmoCh06G010830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]3.5e-2382.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MK        VDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]4.6e-2382.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MK        VDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]1.6e-2382.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MK        VDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]2.4e-2791.01Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMK        VDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]3.0e-2280.9Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDLRREK EKEKAAKKLQAKKNKMK        VDGSGKKKKG  GFQVGK+K+KTKLTA AKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein2.2e-2382.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MK        VDGSGKKKKGG GFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like1.7e-2382.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRK Q+EFDL+REKQEKEKAAKKLQAKKN MK        VDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162877.7e-2482.02Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REK E+EKAAKKLQAKKN+MK        VDGSGK+KKGG GFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1FV29 uncharacterized protein LOC1114471141.1e-2791.01Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMK        VDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732881.1e-2791.01Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMK        VDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein7.3e-1967.05Show/hide
Query:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNL++RK QHE++L++EK+ ++K  KKL A KNKMK        VDGSGKKKKG  GF VGKKK+KTKLT  AKAKAAQAMELD
Subjt:  MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAAAATAATCTTTCGCGCAGGAAGAATCAACATGAATTCGACCTTCGAAGGGAGAAACAGGAAAAAGAAAAGGCGGCGAAAAAGCTCCAAGCAAAGAAGAA
TAAGATGAAGGTATCGCTCTCTCTCTTTATCTCTGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGA
CTGCAGCGGCAAAGGCAAAAGCAGCCCAGGCAATGGAACTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
GGGAAAAAAAAAAAGAAAGAGAGAGGAAAAAAACAGCATGGGCCAACCCGGTTTGGTATAAGAGTAACCTCAGTGCAGTTGCTGAGTAAATATCGGGTTAGGGTTTAAGA
AAACGGTGACGTGCGGCAAATCGAGGAAATTTCCGGCGGCCGGGGCGCAACAAAATGTCGAAGAAAAATAATCTTTCGCGCAGGAAGAATCAACATGAATTCGACCTTCG
AAGGGAGAAACAGGAAAAAGAAAAGGCGGCGAAAAAGCTCCAAGCAAAGAAGAATAAGATGAAGGTATCGCTCTCTCTCTTTATCTCTGTTGATGGTAGTGGAAAGAAAA
AGAAGGGTGGAGCTGGGTTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACTGCAGCGGCAAAGGCAAAAGCAGCCCAGGCAATGGAACTTGATAAATGAGGTTTG
ACGTGTATATTTTTAGGGACCTGGATTGATGAATGGATATACTTATTTCTTGTGATCTGTAACAGAAAGAAAGTTCTTAATTTCTAGTAAACTTTGATCTTCCACTTGCC
TTCTCTCTTGATTTCTGATCTCTTTATTGCCTGAATTCGAATCTGATAGATTGAGGATGTTTATATTGATATACTATGTGGAGTAATTTCATATTTGAAATGGGTTATGA
AGCCACCCCTTTGTTCTTTTAAGTTCGATGTTTCAATCTTGTAAATCTTCCCTTGAACGCTCAATTTTTGTTCGGCC
Protein sequenceShow/hide protein sequence
MSKKNNLSRRKNQHEFDLRREKQEKEKAAKKLQAKKNKMKVSLSLFISVDGSGKKKKGGAGFQVGKKKVKTKLTAAAKAKAAQAMELDK