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CmoCh06G010840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G010840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:8365749..8368041
RNA-Seq ExpressionCmoCh06G010840
SyntenyCmoCh06G010840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438056.1 PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]2.5e-5680.26Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRST+ A++KSSF SLLES+RP+A   SEPGIS  P HEDDE Q TRGE T+LH+EGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK
        E  KKIQL+KDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK

XP_022938825.1 uncharacterized protein LOC111444897 isoform X1 [Cucurbita moschata]7.3e-77100Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

XP_022974668.1 uncharacterized protein LOC111473350 isoform X1 [Cucurbita maxima]1.2e-7498.05Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MSFDKPGEDTGVSGFESEEMEPDSE EELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFG SEPGISVPPNHEDDEQQITRGEGTVLHDEGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        E EKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

XP_023540790.1 uncharacterized protein LOC111801058 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-7598.7Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQIT GEGTVLHDEGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        E EKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

XP_038906552.1 uncharacterized protein LOC120092518 [Benincasa hispida]3.9e-6285.06Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MS DKPGED GVSGFESEE EPDSEL+ELELEV QMAQRILHYRSTLSAQLKSSF SLLES+RP+A G SEPGIS  PNHEDDE Q TRGEGTVLH+EGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        E  KKIQLLKDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

TrEMBL top hitse value%identityAlignment
A0A0A0L8X5 Uncharacterized protein1.5e-5680.52Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MS DKPGED GVSGFE EE EPDSELEELELEV QMAQRILHYRSTLSAQ+KSSF SLLES+RP+A   SEPGIS  P+HEDDE Q TRGE T LH+EGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        E  KKIQL+KDKISSN +MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

A0A1S3AVF8 uncharacterized protein LOC1034832781.2e-5680.26Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRST+ A++KSSF SLLES+RP+A   SEPGIS  P HEDDE Q TRGE T+LH+EGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK
        E  KKIQL+KDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK

A0A6J1FKW2 uncharacterized protein LOC111444897 isoform X13.5e-77100Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

A0A6J1IGZ6 uncharacterized protein LOC111473350 isoform X15.7e-7598.05Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL
        MSFDKPGEDTGVSGFESEEMEPDSE EELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFG SEPGISVPPNHEDDEQQITRGEGTVLHDEGL
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGL

Query:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        E EKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Subjt:  EAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

A0A6J1IZA2 uncharacterized protein LOC1114798071.6e-5376.77Show/hide
Query:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGIS-VPPNHEDDEQQITRGEGTVLHDEG
        MS D PGED GVSGFES++ EP  E+EELELEVNQ+AQRI HYRSTLSAQLKSSF SLLES+RP+  G SE G S  PP+HEDDEQ  TRGEGTV H+EG
Subjt:  MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGIS-VPPNHEDDEQQITRGEGTVLHDEG

Query:  LEAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
        LE  KKIQLL+DKISSNI +IP VLKRMKDCISTIDNL SYNG IHPAFKR+K S
Subjt:  LEAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00525.1 unknown protein2.5e-1440.91Show/hide
Query:  DSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTV--LHDEGLEAEKKIQLLKDKISSNISMI
        + +LE+LE +V QMA++I  YR TL   L+++  S L S  PV F   + G    P+       +T  E  V  + +E    EK IQ LK+++S N + I
Subjt:  DSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTV--LHDEGLEAEKKIQLLKDKISSNISMI

Query:  PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK
        P V+KRM++CI +ID LDS   +IHPAFKR++
Subjt:  PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCTTGAGGAGCTCGAGCTTGAAGTAAACCAAATGGC
TCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGACCCTCGGAGCCGGGAA
TATCTGTTCCTCCGAATCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACAGTCCTTCATGACGAGGGTTTAGAAGCAGAAAAGAAGATACAATTGCTCAAA
GATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGATTCGTATAATGGGTCCATTCATCCTGC
ATTCAAAAGGAGAAAAGCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
GGCTCGGGCTGCACGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTTGCAGTCGATTTCACACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCGAAACCCC
AAGATTCGCATTCGTTTCGAACACAACTGAATTTCGTTGCTCTGATCTTTCAATCCTACTTCTGTAGAAACTGCCTGTGGATGTAAACTGAAACATGTCCTTCGACAAAC
CCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCTTGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCAC
TACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGACCCTCGGAGCCGGGAATATCTGTTCCTCCGAA
TCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACAGTCCTTCATGACGAGGGTTTAGAAGCAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTA
ATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGATTCGTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAA
GCTAGCTGAATTTCACTTCTGGTATGCCTACTAGTTACTTTTGTGGCAAATTACTTTACAAGGGGATCTTGAGTGCAATACAATTATTTAGTTAGATGTGTACCCACCCG
CGCTTACGGCTCTTTATCCCGACCCAACTAGGTCCCTTTATATTCTTATCCCGACCCAACTAGGTCCCTTTATATTCTT
Protein sequenceShow/hide protein sequence
MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLK
DKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS