CuGenDBv2

Gene ID	CmoCh06G010930
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein PAIR1 isoform X2
Genome location	Cmo_Chr06:8414450..8420515
RNA-Seq Expression	CmoCh06G010930
Synteny	CmoCh06G010930
Gene Ontology terms	GO:0009553 - embryo sac development (biological process) GO:0009555 - pollen development (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0051026 - chiasma assembly (biological process)
InterPro domains	IPR034546 - Protein PAIR1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022943725.1 protein PAIR1 isoform X1 [Cucurbita moschata]

8.4e-221

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
        MRLKINKACDLSSISVLPPQ SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
Subjt:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ

Query:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
        LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
Subjt:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG

Query:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
        FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Subjt:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR

Query:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
        ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
Subjt:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR

Query:  KYCNPIIIN
        KYCNPIIIN
Subjt:  KYCNPIIIN

XP_022943732.1 protein PAIR1 isoform X2 [Cucurbita moschata]

3.4e-222

100

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
        MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL

Query:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
        PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
Subjt:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF

Query:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
        KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Subjt:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA

Query:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
        TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
Subjt:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK

Query:  YCNPIIIN
        YCNPIIIN
Subjt:  YCNPIIIN

XP_022974596.1 protein PAIR1-like isoform X1 [Cucurbita maxima]

3.1e-215

97.07

Show/hide

Query:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
        MRLKINKACDLSSISVLPPQ SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
Subjt:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ

Query:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
        LPLSKSSTSLTQRWKSTPLPD KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMK+TLDGG
Subjt:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG

Query:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
        FKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+NDFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Subjt:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR

Query:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
        ATAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAK+ET+RILRKARRQKR
Subjt:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR

Query:  KYCNPIIIN
        KYCNPIIIN
Subjt:  KYCNPIIIN

XP_022974597.1 protein PAIR1-like isoform X2 [Cucurbita maxima]

1.2e-216

97.3

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
        MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL

Query:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
        PLSKSSTSLTQRWKSTPLPD KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMK+TLDGGF
Subjt:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF

Query:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
        KLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+NDFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Subjt:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA

Query:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
        TAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAK+ET+RILRKARRQKRK
Subjt:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK

Query:  YCNPIIIN
        YCNPIIIN
Subjt:  YCNPIIIN

XP_023539314.1 protein PAIR1-like [Cucurbita pepo subsp. pepo]

2.4e-220

99.02

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
        MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL

Query:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
        PLSKSSTSLTQRWKSTPLPDSKCQ+GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMK+TLDGGF
Subjt:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF

Query:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
        KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Subjt:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA

Query:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
        TAVQTEEVGRWKSVKVGK FCTSTV KKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
Subjt:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK

Query:  YCNPIIIN
        YCNPIIIN
Subjt:  YCNPIIIN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FTV4 protein PAIR1 isoform X2

1.6e-222

100

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
        MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL

Query:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
        PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
Subjt:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF

Query:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
        KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Subjt:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA

Query:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
        TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
Subjt:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK

Query:  YCNPIIIN
        YCNPIIIN
Subjt:  YCNPIIIN

A0A6J1FY69 protein PAIR1 isoform X1

4.0e-221

99.76

Show/hide

Query:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
        MRLKINKACDLSSISVLPPQ SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
Subjt:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ

Query:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
        LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
Subjt:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG

Query:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
        FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Subjt:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR

Query:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
        ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
Subjt:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR

Query:  KYCNPIIIN
        KYCNPIIIN
Subjt:  KYCNPIIIN

A0A6J1IAP9 protein PAIR1-like isoform X2

6.0e-217

97.3

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
        MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQL

Query:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF
        PLSKSSTSLTQRWKSTPLPD KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMK+TLDGGF
Subjt:  PLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGF

Query:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
        KLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+NDFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA
Subjt:  KLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRA

Query:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK
        TAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAK+ET+RILRKARRQKRK
Subjt:  TAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRK

Query:  YCNPIIIN
        YCNPIIIN
Subjt:  YCNPIIIN

A0A6J1IBT5 protein PAIR1-like isoform X1

1.5e-215

97.07

Show/hide

Query:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
        MRLKINKACDLSSISVLPPQ SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
Subjt:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ

Query:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
        LPLSKSSTSLTQRWKSTPLPD KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMK+TLDGG
Subjt:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG

Query:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
        FKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+NDFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Subjt:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR

Query:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
        ATAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAK+ET+RILRKARRQKR
Subjt:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR

Query:  KYCNPIIIN
        KYCNPIIIN
Subjt:  KYCNPIIIN

A0A6J1IGR9 protein PAIR1-like isoform X3

2.2e-203

93.15

Show/hide

Query:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
        MRLKINKACDLSSISVLPPQ SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ
Subjt:  MRLKINKACDLSSISVLPPQ-SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQ

Query:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG
        LPLSKSSTSLTQRWKSTPLPD KCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDV              Q  NKEHDDMK+TLDGG
Subjt:  LPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGG

Query:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
        FKLISDQLKKDAYQ+RLHEISDVLSALEKQVQASQLKL+NDFIS FTQEMKAMVCTLKK LQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR
Subjt:  FKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIR

Query:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR
        ATAVQTEE+GRWKSVKVGKTFCTSTV KKEDAKKAIPFSEQRLV+EREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAK+ET+RILRKARRQKR
Subjt:  ATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKR

Query:  KYCNPIIIN
        KYCNPIIIN
Subjt:  KYCNPIIIN

SwissProt top hits

e value

%identity

Alignment

Q0WWX5 Putative recombination initiation defects 3

6.1e-65

37.93

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSRE
        M++ INKACDL SISV PP  R +A    Q + QLRSQ SQQSFSQG SS     G  SQ +Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RE
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSRE

Query:  ECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTL
        + QL  S+SS+ L++RW S  + +SK Q+ EEL++R G +E SL++FG +LDS+  DI+  N+G K++ L+ E I QK+ +  + LQ + KE  D K++L
Subjt:  ECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTL

Query:  DGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA----
        DGG K I ++  KD  QE+L +I  +L+ + +QV+ +  K++ +   TFT+E++ ++ +L+ P  +   R   +P+  A  ++P+Q+ +  K+ ++    
Subjt:  DGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA----

Query:  SPDVCIRA-----------------------TAVQTE------------------------EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVE
         P V + A                       T ++T+                        +VG WK+VK  K     +  KK   +K +     R   E
Subjt:  SPDVCIRA-----------------------TAVQTE------------------------EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVE

Query:  REYRVIVDSDEE-IERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRKYCNPIIIN
         +  V++DSDEE I+  FSCLI E   G +  +    DA++ETERILR ARR KRK+ NPIIIN
Subjt:  REYRVIVDSDEE-IERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRKYCNPIIIN

Q75RY2 Protein PAIR1

1.6e-28

36.93

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Query:  MRLKINKACDLSSISVLPPQ---SRSNALTTGQQAPQLRSQP-------SQQSFSQGLS-SLHGTNSQFSQNSFDEVV-------TNEQRFSSQDRENSI
        M+LK+NKACD++SISVLPP+     S A  +G  A  + SQP       SQQSFSQG S SL  + SQFSQ S D+ +       T +QRF   D  +S 
Subjt:  MRLKINKACDLSSISVLPPQ---SRSNALTTGQQAPQLRSQP-------SQQSFSQGLS-SLHGTNSQFSQNSFDEVV-------TNEQRFSSQDRENSI

Query:  KKNSFFPPLSYS--REECQLPLSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS
        K+ S  P  S S  REE QL L+K  ++   RW  +       QV  E+++R+   + +S++K G ++DS+  D++ LN+ MK+ SLD   I QK+ V  
Subjt:  KKNSFFPPLSYS--REECQLPLSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNS

Query:  SLLQSMNKEHDDMKSTLDGGFKLISDQLK-KDAYQERLHEISDVLSALEKQVQASQLKLRNDFI----STFTQEMKAMVCTLKKPLQ
        S LQ + K  DD+K+      K   DQ    ++   +L+EIS  L+ L+ Q+QA QL+     +    ++ + E+ + + TL+  +Q
Subjt:  SLLQSMNKEHDDMKSTLDGGFKLISDQLK-KDAYQERLHEISDVLSALEKQVQASQLKLRNDFI----STFTQEMKAMVCTLKKPLQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G01690.1 putative recombination initiation defects 3

4.3e-66

37.93

Show/hide

Query:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSRE
        M++ INKACDL SISV PP  R +A    Q + QLRSQ SQQSFSQG SS     G  SQ +Q+S DE++ N+QRFSSQ+R+ S+KK +S  PP+++ RE
Subjt:  MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLH---GTNSQFSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFPPLSYSRE

Query:  ECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTL
        + QL  S+SS+ L++RW S  + +SK Q+ EEL++R G +E SL++FG +LDS+  DI+  N+G K++ L+ E I QK+ +  + LQ + KE  D K++L
Subjt:  ECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTL

Query:  DGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA----
        DGG K I ++  KD  QE+L +I  +L+ + +QV+ +  K++ +   TFT+E++ ++ +L+ P  +   R   +P+  A  ++P+Q+ +  K+ ++    
Subjt:  DGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSA----

Query:  SPDVCIRA-----------------------TAVQTE------------------------EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVE
         P V + A                       T ++T+                        +VG WK+VK  K     +  KK   +K +     R   E
Subjt:  SPDVCIRA-----------------------TAVQTE------------------------EVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVE

Query:  REYRVIVDSDEE-IERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRKYCNPIIIN
         +  V++DSDEE I+  FSCLI E   G +  +    DA++ETERILR ARR KRK+ NPIIIN
Subjt:  REYRVIVDSDEE-IERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRKYCNPIIIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCTATATCTGTTCTTCCTCCTCAATCCAGGTCAAATGCGTTAACCACCGGGCAGCAAGCACCACAGTTGCGATC
ACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCTGCACGGCACGAATTCTCAATTCTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTA
GCTCTCAAGACCGAGAAAATTCAATTAAGAAGAATTCTTTTTTTCCTCCTCTAAGTTATTCAAGAGAAGAATGCCAATTGCCACTCTCTAAATCTTCAACCAGTTTAACA
CAAAGATGGAAATCAACTCCACTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATTGAAAACTCATTGAACAAATTTGGAAAGATCCT
GGATTCTCTTCATGGTGATATTCTGCATCTAAACCAAGGAATGAAGCAGATTTCTCTGGATGTCGAAGGCATATGGCAAAAGGTGATTGTTAACAGTAGCTTGCTGCAAT
CCATGAACAAAGAGCACGATGACATGAAATCTACCCTCGATGGAGGCTTCAAACTGATATCCGATCAACTAAAGAAGGATGCATACCAAGAAAGGCTACACGAGATTTCT
GATGTTCTTTCTGCATTGGAAAAACAAGTACAAGCATCTCAACTGAAACTAAGAAATGATTTCATCAGCACGTTCACCCAAGAAATGAAGGCAATGGTCTGTACCCTGAA
AAAACCCTTGCAGAAATTTCCACATCGCCCTATTGAATCTCCCGAGAGTACCGCTTCTTTGGATGTCCCACAGCAAAAGCGTCGTCGATGTAAAATCCAATCTGCGTCTC
CAGATGTTTGCATTCGAGCAACTGCAGTACAAACCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTAGGAAAGACATTTTGCACTAGTACTGTGGCGAAAAAGGAAGAT
GCAAAGAAAGCAATTCCATTTTCTGAACAGCGCCTGGTGGTGGAAAGAGAATATAGAGTTATTGTTGATTCTGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATCGA
AGAGAAGAAAACAGGAGAAGATGTCCGTTTCTATTCAATAGAAGACGCCAAGGAAGAAACTGAAAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATACTGCAATC
CTATAATTATAAATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRLKINKACDLSSISVLPPQSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLT
QRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEIS
DVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKED
AKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGEDVRFYSIEDAKEETERILRKARRQKRKYCNPIIIN

CmoCh06G010930 (gene) of Cucurbita moschata (Rifu) v1 genome