CuGenDBv2

Gene ID	CmoCh06G010970
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Mesd domain-containing protein
Genome location	Cmo_Chr06:8443198..8444908
RNA-Seq Expression	CmoCh06G010970
Synteny	CmoCh06G010970
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597131.1 hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-115

99.53

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_008438032.1 PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo]

3.2e-94

81.31

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KDAGFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

XP_022942170.1 uncharacterized protein LOC111447309 [Cucurbita moschata]

3.2e-115

100

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_022974607.1 uncharacterized protein LOC111473291 [Cucurbita maxima]

8.8e-113

98.13

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRI ITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVF+HPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

XP_023540100.1 uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo]

4.7e-114

99.07

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7G1 Uncharacterized protein

1.4e-92

79.44

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+ AGI  D GFNRFA+GGQRR+HITDDLDDVVDDEED+SWK+WGKKKSAS+DFD+PP DLSKM++PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+ V  IAMQWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL+EL EFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T  S+++EPLHQEL
Subjt:  TNPSEDTEPLHQEL

A0A1S3AVD9 uncharacterized protein LOC103483266

1.5e-94

81.31

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KDAGFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

A0A5A7TZI6 Mesd domain-containing protein

1.5e-94

81.31

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFS SS LPVF LIV+  GI KDAGFNRFA+GGQRRIHITDDLDDVVDDEED+SWK+WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTP+MV  IAMQWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPGDPP+EEVI++LQKDKNKAD 
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        T PSE+ EPLH+EL
Subjt:  TNPSEDTEPLHQEL

A0A6J1FVR6 uncharacterized protein LOC111447309

1.6e-115

100

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

A0A6J1IAQ9 uncharacterized protein LOC111473291

4.3e-113

98.13

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Query:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
        MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRI ITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG
Subjt:  MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMG

Query:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
        FVKLRLGVRRTPEMV TIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVF+HPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD
Subjt:  FVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADD

Query:  TNPSEDTEPLHQEL
        TNPSEDTEPLHQEL
Subjt:  TNPSEDTEPLHQEL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G46000.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

7.3e-49

53.48

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Query:  GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILK
        GF R AE  +RRI I+DDLDDV D+EEDESWKEWG KK+ + +FD PPPD + M   +IQ EM KR  G  +GFVKLRLGV RT ++V  IAM+WT++L+
Subjt:  GFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILK

Query:  TGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
        TG I  +FMAVD ST+MF +  G+ + EL+EFV S  E+YE+KIG+Q FRRPGDPP E+V +  Q ++ K  +       +    EL
Subjt:  TGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL

Sequences

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CDS sequence

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ATGAGAATTTGCTTCTCACCTTCATCGCTTCTACCAGTCTTCTTTCTGATCGTCCTCACCGCCGGCATTTTCAAGGATGCCGGATTCAATCGTTTCGCCGAAGGTGGACA
GCGGAGAATCCACATTACAGATGATCTCGATGACGTGGTTGACGATGAAGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCGATTTCGACCTCC
CGCCGCCTGATTTATCGAAGATGGAGCTTCCGGAGATCCAGGCTGAGATGATGAAGCGGCAATCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGCGTTCGTCGG
ACTCCGGAGATGGTGGGTACGATTGCAATGCAATGGACGAGAATTCTGAAAACTGGATCAATCGAGGCAAAATTTATGGCGGTAGACCTCAGTACACTCATGTTCACAGT
GGACAGAGGACAAGATTTGGATGAGTTGAAGGAGTTTGTGTTTAGCCATCCCGAATCGTACGAGATCAAAATTGGGGAGCAAGCATTTCGAAGACCTGGAGATCCTCCTG
TTGAGGAAGTCATTGAGATGCTCCAAAAGGATAAGAACAAAGCTGATGACACCAATCCTTCAGAAGATACCGAGCCATTGCATCAAGAATTATAG

mRNA sequence

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Protein sequence

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MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRR
TPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL

CmoCh06G010970 (gene) of Cucurbita moschata (Rifu) v1 genome