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CmoCh06G011800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G011800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein A3
Genome locationCmo_Chr06:9013588..9016102
RNA-Seq ExpressionCmoCh06G011800
SyntenyCmoCh06G011800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597213.1 hypothetical protein SDJN03_10393, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6696.97Show/hide
Query:  MAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS
        MAAFAAGNHYSRPHGYPPPPPCAGAGYV PVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP  GHGHGHGMGGLLAGGAAAAAAAYGAHHVVH+
Subjt:  MAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS

Query:  HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

KAG7028684.1 hypothetical protein SDJN02_09865 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-7797.32Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYV PVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP  GHGHGHGMGGLLAG
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG

Query:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        GAAAAAAAYGAHHVVH+HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

XP_022950701.1 glycine-rich protein A3 [Cucurbita moschata]8.8e-80100Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA

Query:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

XP_022974188.1 glycine-rich protein A3-like isoform X1 [Cucurbita maxima]1.2e-7697.32Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGG PPAGYPGHHHYP  GHGHGHGMGGLLAG
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG

Query:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        GAAAAAAAYGAHHVVH+HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

XP_023538813.1 glycine-rich protein A3 [Cucurbita pepo subsp. pepo]1.7e-7898.64Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVP VGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA

Query:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        AAAAAAYGAHHVVH+HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

TrEMBL top hitse value%identityAlignment
A0A1S3AWG9 glycine-rich protein A33.8e-5272.73Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGY-----VPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMG
        MGGGK+ +  D+GL S+MAAFAAG+HY   HGY PPPP  GAGY      PP GYPPAGYPP GG+P   YPY GG PPAGYPG HHYP  GHGHGHG+G
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGY-----VPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMG

Query:  GLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        GLLAGGAAAAAAAYGAHH+ H+ PFG+G+G+FKHGKFGKRWKHGGKF +FKKWK
Subjt:  GLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

A0A6J1D180 glycine-rich protein A39.0e-5471.34Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGY-PPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAG-----------YPYHGGCPPAGYPGHHHYPGHGH
        MGGGK+KD+++RGL SH+ AFAAG+HY   HGY PPPPP  GAGY PP GYPPAGYPPPGGYPPAG           YPY GG PPAGYPG HH+P  GH
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGY-PPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAG-----------YPYHGGCPPAGYPGHHHYPGHGH

Query:  GHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYG-----YGRFKHGKFGKRWKHGGKFMKFKKWK
        GHGMG +LAGGAAAAAAAYGAHH+VH+ PFG+G     +G+FKHGKFGKRWKHGGKFMKFK+WK
Subjt:  GHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYG-----YGRFKHGKFGKRWKHGGKFMKFKKWK

A0A6J1GGM8 glycine-rich protein A34.3e-80100Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGA

Query:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  AAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

A0A6J1IGV8 glycine-rich protein A3-like isoform X15.8e-7797.32Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG
        MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGG PPAGYPGHHHYP  GHGHGHGMGGLLAG
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYP--GHGHGHGMGGLLAG

Query:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
        GAAAAAAAYGAHHVVH+HPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
Subjt:  GAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

A0A6J1IZ97 glycine-rich protein A3-like9.9e-5368.82Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAG----------------------YPPPGGYPPAGYPYHGGCPPAGYP
        MGGGK++++ D+GL S MA+FAAG HYS PHGYPPPPP AGAGY PP GYPPAG                      YPPPGGYPPAGYP HG  PPAGYP
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAG----------------------YPPPGGYPPAGYPYHGGCPPAGYP

Query:  GHHHYPGH-GHGHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK
          HHYPGH GHG GMGGLLAGGAAAAAAAYGAHH+ H+ PFG+G+G+FKHGKFGKRWKHGG   KFKKWK
Subjt:  GHHHYPGH-GHGHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK

SwissProt top hitse value%identityAlignment
O16005 Rhodopsin3.7e-0453.85Show/hide
Query:  AAFAAGNHYSRPHGYPP---PPPCAGAGYVPPVGY--PPAGYPPPGGYPPAGYPYHGGCPPAGYP
        AA+     Y    GYPP   PPP A  GY PP GY  PP GYPP  GYPP GYP   G PP G P
Subjt:  AAFAAGNHYSRPHGYPP---PPPCAGAGYVPPVGY--PPAGYPPPGGYPPAGYPYHGGCPPAGYP

P37705 Glycine-rich protein A31.5e-1849.32Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPP-----PP---PCAGAGYVPPVGYPPAGYPPPGGYPPAGY-PYHGGCPPAGYP--GHH------HY
        MGGG   +  D+GL S++A   AG  +  P  YPP     PP   P AG GY PP GYPPAG    GGYPP GY P  GG PP GYP  GHH      H+
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPP-----PP---PCAGAGYVPPVGYPPAGYPPPGGYPPAGY-PYHGGCPPAGYP--GHH------HY

Query:  PGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFG
         GHG   G+ G++AGG AAAAAAYG HH+   H    G+G + HG  G
Subjt:  PGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHSHPFGYGYGRFKHGKFG

Arabidopsis top hitse value%identityAlignment
AT1G31750.1 proline-rich family protein1.7e-1749.36Show/hide
Query:  GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPP---PPPCAGAGYVPPVGYPPAGY-PPPGGYPPAGY-PYHGGCPPAGYPGHHHYPGHGHGHGMGGLLA
        G  D    D+   SH        H    HGYPP   PPP  GA Y PP GYPP GY PPP GYPPA Y P  G  PPAGYPG    P  G G G+GGL+A
Subjt:  GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPP---PPPCAGAGYVPPVGYPPAGY-PPPGGYPPAGY-PYHGGCPPAGYPGHHHYPGHGHGHGMGGLLA

Query:  GGAAAAAAAYGAHHVVHSHPFG-YGYGRFKHGKFG----KRWKH----GGKFMKFK
        G A AAAAA G HH  H   +G +G+G++K G FG    KR KH    GGK+ + K
Subjt:  GGAAAAAAAYGAHHVVHSHPFG-YGYGRFKHGKFG----KRWKH----GGKFMKFK

AT4G19200.1 proline-rich family protein2.6e-2146.52Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYS------RPHGYPPPPPCAGAGYVPPVGYPPAGYP-PPGGYPPAGYPYHGGCPPAGY--PGHHHYPGHGHGHG
        MGGGKDK  +++    H   F  G HY        P GYPP      AG  PP GYPP  YP  PGGYPPA     GG PPAGY  PG HH  GH  G G
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYS------RPHGYPPPPPCAGAGYVPPVGYPPAGYP-PPGGYPPAGYPYHGGCPPAGY--PGHHHYPGHGHGHG

Query:  MGGLLAGGAAAAAAAYGAHHVVH-------------------SHPFGY-GYGRFKHGKFGKRWKHG-----------GKFMKFKKWK
        +GG++AG A AAAAAYGAHHV H                   +H FG+ G+G+FKHGK G ++KHG           G   KFKKWK
Subjt:  MGGLLAGGAAAAAAAYGAHHVVH-------------------SHPFGY-GYGRFKHGKFGKRWKHG-----------GKFMKFKKWK

AT5G17650.1 glycine/proline-rich protein5.2e-2246.24Show/hide
Query:  GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP------------PPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGH----HHYP--
        G    + +DRG   ++A FA G +    HGY             PPPP       PP GYPP  YPP GGYPPAGYP   G PPAGYP H    H YP  
Subjt:  GGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP------------PPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGH----HHYP--

Query:  ---GHGHGHGMGGLLAGGAAAAAAAYGAHHVV---------HSHPFGYGY--------GRFKHGKFGKR---WKHGGKFMKFKKWK
           GH HG G+G ++AGG AAAA   GAHH+          H H +GYGY        G+FKHGKFGK     KH GKF  FKKWK
Subjt:  ---GHGHGHGMGGLLAGGAAAAAAAYGAHHVV---------HSHPFGYGY--------GRFKHGKFGKR---WKHGGKFMKFKKWK

AT5G45350.1 proline-rich family protein3.8e-2046.6Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP----PPPPCAGAGYVPPVGYPPAGYPP-PGGYPPA-------------GY---PYHGGCPPAGYPG
        MGG  D D  D+G   +  A         P GYP    PPPP    G  PP GYPP  YPP PGGYPPA             GY   P HGG PPAGYP 
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP----PPPPCAGAGYVPPVGYPPAGYPP-PGGYPPA-------------GY---PYHGGCPPAGYPG

Query:  HHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS---------------HPFGYGY----GRFKHGKFGKRWKHGGKFM----KFKKWK
        HH     GH  G+GG++AG    AAAAYGAHHV HS               H  GYGY    G+FKHGK GK +KHG   M    KFKKWK
Subjt:  HHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS---------------HPFGYGY----GRFKHGKFGKRWKHGGKFM----KFKKWK

AT5G45350.2 proline-rich family protein3.8e-2046.6Show/hide
Query:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP----PPPPCAGAGYVPPVGYPPAGYPP-PGGYPPA-------------GY---PYHGGCPPAGYPG
        MGG  D D  D+G   +  A         P GYP    PPPP    G  PP GYPP  YPP PGGYPPA             GY   P HGG PPAGYP 
Subjt:  MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYP----PPPPCAGAGYVPPVGYPPAGYPP-PGGYPPA-------------GY---PYHGGCPPAGYPG

Query:  HHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS---------------HPFGYGY----GRFKHGKFGKRWKHGGKFM----KFKKWK
        HH     GH  G+GG++AG    AAAAYGAHHV HS               H  GYGY    G+FKHGK GK +KHG   M    KFKKWK
Subjt:  HHHYPGHGHGHGMGGLLAGGAAAAAAAYGAHHVVHS---------------HPFGYGY----GRFKHGKFGKRWKHGGKFM----KFKKWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGGAAGGACAAGGACACTAATGACAGGGGCCTGCTTTCACATATGGCAGCGTTTGCTGCAGGGAACCACTACTCTCGTCCTCATGGATATCCACCACCACC
GCCATGCGCCGGTGCTGGGTATGTTCCTCCGGTAGGGTACCCTCCGGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTTATCACGGCGGATGCCCTC
CCGCTGGCTATCCTGGTCATCATCACTACCCTGGCCATGGACACGGACACGGCATGGGGGGGTTGTTGGCTGGCGGAGCAGCTGCCGCCGCCGCCGCTTACGGTGCTCAC
CATGTTGTTCATTCACACCCATTTGGCTATGGTTACGGAAGGTTCAAACATGGGAAATTTGGGAAGCGTTGGAAGCATGGAGGTAAGTTCATGAAATTCAAGAAATGGAA
GTGA
mRNA sequenceShow/hide mRNA sequence
TATGTTTTAGTGGTATCGAACCATCGACCTTATCGAATATCGAATATTGGGATTAGGTGATATTGTAATTTGTTTAATTAGGAATCAAAAATTGGAGGGCAAAAATGACG
TACTGAATTGGACGCGTCCAAGCAACGCCAAGGCGGTCGATACTCTTTGATGGAATAAACACAAAGGGTGAGGAATAAGCGTCAAAGTTCAAATCAATCTCTGTTTTGTA
CGTCTCTGTCTCTCCTAATCGCCATTTTCACGGAGCACACCAAAATCTCTCTTGCATCTCTGTTCATAGTTTGGTTACTGCTCTCGGAATCTTAAAGAAATATGGGAGGT
GGGAAGGACAAGGACACTAATGACAGGGGCCTGCTTTCACATATGGCAGCGTTTGCTGCAGGGAACCACTACTCTCGTCCTCATGGATATCCACCACCACCGCCATGCGC
CGGTGCTGGGTATGTTCCTCCGGTAGGGTACCCTCCGGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTTATCACGGCGGATGCCCTCCCGCTGGCT
ATCCTGGTCATCATCACTACCCTGGCCATGGACACGGACACGGCATGGGGGGGTTGTTGGCTGGCGGAGCAGCTGCCGCCGCCGCCGCTTACGGTGCTCACCATGTTGTT
CATTCACACCCATTTGGCTATGGTTACGGAAGGTTCAAACATGGGAAATTTGGGAAGCGTTGGAAGCATGGAGGTAAGTTCATGAAATTCAAGAAATGGAAGTGATTAAA
TTGCTACCTATCTGTGTTGAATATATATATATATATATATCGTTGTGTGAGTTTTGAGTCTGAACCTAGAAAACTAAATAATGGTATCTTATTGCTTGTACTTTGGTTAT
GATATTGGCTTCTTATGTAAACAATGCGATCTTTTTTTCTTTTTTCTTTTTTTCTTTTCTTAATTGGACCATTAAAAAA
Protein sequenceShow/hide protein sequence
MGGGKDKDTNDRGLLSHMAAFAAGNHYSRPHGYPPPPPCAGAGYVPPVGYPPAGYPPPGGYPPAGYPYHGGCPPAGYPGHHHYPGHGHGHGMGGLLAGGAAAAAAAYGAH
HVVHSHPFGYGYGRFKHGKFGKRWKHGGKFMKFKKWK