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CmoCh06G011990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G011990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:9117407..9117664
RNA-Seq ExpressionCmoCh06G011990
SyntenyCmoCh06G011990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049081.1 hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa]5.7e-2371.59Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPV
        MDITVPG+N  EEVTRESLI+ISY EPE+ LSSKRPS KL+S+N+NL        VEGKE+D DEK+RSELI+ISFLES PE GSVPV
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPV

KAG6582528.1 hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2272.83Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNL--------NLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLK
        MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELI+ISFLESPPEIGS  V +LK
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNL--------NLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLK

KAG6597232.1 DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.0e-37100Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

XP_022963288.1 uncharacterized protein LOC111463263 [Cucurbita moschata]7.0e-37100Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

XP_022974968.1 uncharacterized protein LOC111473815 [Cucurbita maxima]1.6e-3698.82Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELI+ISFLESPPEIGSVPVGKLKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

TrEMBL top hitse value%identityAlignment
A0A0A0L967 Uncharacterized protein1.8e-2264.52Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MD TVPG+N  EEVTRESLI+ISY EPE+ LSS +PS K++ +N+NL        +EGKE+D DEK+RSELI+ISFLES PE GSVPV +LKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

A0A5A7U641 Uncharacterized protein2.8e-2371.59Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPV
        MDITVPG+N  EEVTRESLI+ISY EPE+ LSSKRPS KL+S+N+NL        VEGKE+D DEK+RSELI+ISFLES PE GSVPV
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKEFDADEKYRSELISISFLESPPEIGSVPV

A0A6J1HHB9 uncharacterized protein LOC1114632633.4e-37100Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

A0A6J1IHW2 uncharacterized protein LOC1114738157.5e-3798.82Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG
        MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELI+ISFLESPPEIGSVPVGKLKG
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG

A0A7J6GZJ0 Uncharacterized protein3.4e-1358.33Show/hide
Query:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLK
        MD T  GK VSEEVTRESLI+ISYS PE  L+SKR   K+N +  +LVE  +FD ++K RSELISIS+ +S P++G +P G LK
Subjt:  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAACAGTACCTGGAAAGAATGTTTCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCGGAACCAGAATCAGCTCTCTCTTCAAAACGACCATC
TGGAAAGCTCAATAGCAAAAACCTCAATCTGGTGGAAGGGAAAGAATTTGATGCAGATGAGAAATATAGATCTGAGCTGATTTCAATTTCCTTCCTCGAGTCGCCACCCG
AAATTGGAAGTGTACCCGTCGGCAAACTCAAAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATAACAGTACCTGGAAAGAATGTTTCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCGGAACCAGAATCAGCTCTCTCTTCAAAACGACCATC
TGGAAAGCTCAATAGCAAAAACCTCAATCTGGTGGAAGGGAAAGAATTTGATGCAGATGAGAAATATAGATCTGAGCTGATTTCAATTTCCTTCCTCGAGTCGCCACCCG
AAATTGGAAGTGTACCCGTCGGCAAACTCAAAGGTTAG
Protein sequenceShow/hide protein sequence
MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKG