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CmoCh06G012180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G012180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFLZ-type domain-containing protein
Genome locationCmo_Chr06:9264024..9265218
RNA-Seq ExpressionCmoCh06G012180
SyntenyCmoCh06G012180
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain
IPR044533 - FCS-Like Zinc finger 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133966.2 FCS-Like Zinc finger 3 [Cucumis sativus]9.5e-4184.62Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS---STQSHRKQESSKKTVRSGT
        MRTAPLFYAGCADYL+ EPHFL++CSLCRK LGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSS   S+QSHRKQE++KKTVRSGT
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS---STQSHRKQESSKKTVRSGT

Query:  VAVA
        VAVA
Subjt:  VAVA

XP_022146888.1 uncharacterized protein LOC111015979 [Momordica charantia]2.3e-4284.26Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS-------TQSHRKQESSKKTV
        MRTAPLFYAGCADYL+PEPHFL++CSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSSS       TQ+HRK ESSKKTV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS-------TQSHRKQESSKKTV

Query:  RSGTVAVA
        RSGTVAVA
Subjt:  RSGTVAVA

XP_022950439.1 uncharacterized protein LOC111453538 [Cucurbita moschata]1.2e-48100Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV
        MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV

Query:  A
        A
Subjt:  A

XP_022974769.1 uncharacterized protein LOC111473492 [Cucurbita maxima]6.3e-4594.12Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS-STQSHRKQESSKKTVRSGTVA
        MRTAP FYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSS++SSS STQ+HRKQE+SKKTVRSGTVA
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS-STQSHRKQESSKKTVRSGTVA

Query:  VA
        VA
Subjt:  VA

XP_023526413.1 uncharacterized protein LOC111789921 [Cucurbita pepo subsp. pepo]7.2e-4183.17Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV
        MRT PLFYAGCAD+L+ EPHFL++CSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSS+T+SHRKQE+ +K VRSGTVAV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0L3Z8 FLZ-type domain-containing protein4.6e-4184.62Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS---STQSHRKQESSKKTVRSGT
        MRTAPLFYAGCADYL+ EPHFL++CSLCRK LGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSS   S+QSHRKQE++KKTVRSGT
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS---STQSHRKQESSKKTVRSGT

Query:  VAVA
        VAVA
Subjt:  VAVA

A0A6J1CZR7 uncharacterized protein LOC1110159791.1e-4284.26Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS-------TQSHRKQESSKKTV
        MRTAPLFYAGCADYL+PEPHFL++CSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSSS       TQ+HRK ESSKKTV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS-------TQSHRKQESSKKTV

Query:  RSGTVAVA
        RSGTVAVA
Subjt:  RSGTVAVA

A0A6J1GFT9 uncharacterized protein LOC1114535386.0e-49100Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV
        MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAV

Query:  A
        A
Subjt:  A

A0A6J1IIJ8 uncharacterized protein LOC1114734923.1e-4594.12Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS-STQSHRKQESSKKTVRSGTVA
        MRTAP FYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSS++SSS STQ+HRKQE+SKKTVRSGTVA
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSS-STQSHRKQESSKKTVRSGTVA

Query:  VA
        VA
Subjt:  VA

A0A6J1ITM3 uncharacterized protein LOC1114798162.3e-4083.5Show/hide
Query:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS--TQSHRKQESSKKTVRSGTV
        MRT PLFYAGCAD+L+ EPHFL++CSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQI++DEAKEK+WRRSSSS++SSSS  T+SHRKQES +K VRSGTV
Subjt:  MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSS--TQSHRKQESSKKTVRSGTV

Query:  AVA
        AVA
Subjt:  AVA

SwissProt top hitse value%identityAlignment
O80506 FCS-Like Zinc finger 31.9e-2060.71Show/hide
Query:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA
        EPHFL+SCSLCRK LG NSDIFMYRG+  FCS ECR+EQI+ DEAKE+ W++SS S   +S   S  K+ ++  TVR+GT+ VA
Subjt:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA

Q8VY80 FCS-Like Zinc finger 59.0e-1064.44Show/hide
Query:  FLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK
        FL SCSLC++ L    DI+MYRG+  FCS ECRQ+QI VDE KEK
Subjt:  FLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK

Q8VZM9 FCS-Like Zinc finger 29.9e-1754.44Show/hide
Query:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKT------VRSGTVAVA
        +PHFLDSC LC+K LG N DIFMYRG+TPFCS+ECR+EQI+ DEAKEK   + S ST+  +  ++ ++  SS  T       R+GTVA A
Subjt:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKT------VRSGTVAVA

Q9FGQ9 FCS-Like Zinc finger 13.4e-1754.65Show/hide
Query:  IPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA
        I +PHFLDSC LC+KPLG N DI+MYRG+TPFCS+ECRQEQI+ DEAKEK    S S  ++    +      S      +GTVA A
Subjt:  IPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA

Q9SGZ8 FCS-Like Zinc finger 62.6e-0960.87Show/hide
Query:  HFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK
        HFL SC+LC + L    DI+MYRG+  FCS ECRQEQ+  DE KEK
Subjt:  HFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK

Arabidopsis top hitse value%identityAlignment
AT1G22160.1 Protein of unknown function (DUF581)6.4e-1164.44Show/hide
Query:  FLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK
        FL SCSLC++ L    DI+MYRG+  FCS ECRQ+QI VDE KEK
Subjt:  FLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK

AT1G78020.1 Protein of unknown function (DUF581)1.9e-1060.87Show/hide
Query:  HFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK
        HFL SC+LC + L    DI+MYRG+  FCS ECRQEQ+  DE KEK
Subjt:  HFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEK

AT2G44670.1 Protein of unknown function (DUF581)1.4e-2160.71Show/hide
Query:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA
        EPHFL+SCSLCRK LG NSDIFMYRG+  FCS ECR+EQI+ DEAKE+ W++SS S   +S   S  K+ ++  TVR+GT+ VA
Subjt:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA

AT4G17670.1 Protein of unknown function (DUF581)7.0e-1854.44Show/hide
Query:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKT------VRSGTVAVA
        +PHFLDSC LC+K LG N DIFMYRG+TPFCS+ECR+EQI+ DEAKEK   + S ST+  +  ++ ++  SS  T       R+GTVA A
Subjt:  EPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKT------VRSGTVAVA

AT5G47060.1 Protein of unknown function (DUF581)2.4e-1854.65Show/hide
Query:  IPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA
        I +PHFLDSC LC+KPLG N DI+MYRG+TPFCS+ECRQEQI+ DEAKEK    S S  ++    +      S      +GTVA A
Subjt:  IPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTGCGCCGCTATTCTACGCCGGCTGCGCTGATTACCTTATACCCGAGCCTCATTTCCTTGATTCATGTTCTCTTTGCCGGAAACCGCTCGGACGCAACTCCGA
TATCTTCATGTACAGAGGAAACACTCCGTTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGATGTCGATGAGGCAAAGGAGAAAAACTGGAGACGTTCTTCTTCTTCTA
CTACTTCTTCTTCTAGCACTCAAAGCCACAGAAAACAAGAATCTAGCAAGAAAACTGTTCGATCCGGCACCGTTGCGGTGGCCTGA
mRNA sequenceShow/hide mRNA sequence
CGGCTTCCCATTTCCTCTCTGTCTTCTTTCTCAGAGCTTTAGCCCTAAAACTCTAAGCTCCCGGATTTCTGCTCTCATTTCCGGCGAATTTTCATCAGCTTTCCGTTTCT
TTTCCTTCGTTCACTATGAGAACTGCGCCGCTATTCTACGCCGGCTGCGCTGATTACCTTATACCCGAGCCTCATTTCCTTGATTCATGTTCTCTTTGCCGGAAACCGCT
CGGACGCAACTCCGATATCTTCATGTACAGAGGAAACACTCCGTTTTGTAGCAAAGAGTGCCGGCAAGAACAGATTGATGTCGATGAGGCAAAGGAGAAAAACTGGAGAC
GTTCTTCTTCTTCTACTACTTCTTCTTCTAGCACTCAAAGCCACAGAAAACAAGAATCTAGCAAGAAAACTGTTCGATCCGGCACCGTTGCGGTGGCCTGAGATCTTCTA
TCCGAATCAGAACAAATTTTCTTCTACAGAGAAACAACTTTCCCAATTTGGAAAACGAAAATTGTGAGGCTGAGTGAAGGCTGAGAATGAATTCTCATTACCAGCTTCAG
GACCCGATTTCCAGAGAACCAAAAGAAAAAAAAAATCCATAAATAACTTTTTGATCTCTGAATGTGTATTAAAAAAAAAACATGGGAAAGCAGTCCTGAGATTGGGTGGT
TCTTTGCAGTTTCTCCTAAGAAAAAAAAAACACTCAATTTTGGTAGAATTTTTTTCTTCCCTTCAATTTTGATTATCGAGAATAATTTTTTTTTCTAGAGAATTGATGTT
TAAATCGATCTTAAACTAAAAAAACTAAAACAAAAATGGGAATTCGAGATTACTTTTGTGAAATCAGTATTAAAAATCGAAACTAATGAACAATAATTTAGGAATTCTAG
GTTTCATTACATTTTTTTATTATTTTATTTAATTTTGAAAAAAAA
Protein sequenceShow/hide protein sequence
MRTAPLFYAGCADYLIPEPHFLDSCSLCRKPLGRNSDIFMYRGNTPFCSKECRQEQIDVDEAKEKNWRRSSSSTTSSSSTQSHRKQESSKKTVRSGTVAVA