CuGenDBv2

Gene ID	CmoCh06G012290
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L37a
Genome location	Cmo_Chr06:9307890..9315323
RNA-Seq Expression	CmoCh06G012290
Synteny	CmoCh06G012290
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022626 - cytosolic ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002674 - Ribosomal protein L37ae IPR011331 - Ribosomal protein L37ae/L37e IPR011332 - Zinc-binding ribosomal protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAB2622800.1 hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis]

1.3e-36

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

KAF8379164.1 hypothetical protein HHK36_028593 [Tetracentron sinense]

1.3e-36

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

KDO57018.1 hypothetical protein CISIN_1g044880mg, partial [Citrus sinensis]

1.3e-36

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

KDP45992.1 hypothetical protein JCGZ_11895 [Jatropha curcas]

1.3e-36

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

RXI00911.1 hypothetical protein DVH24_001145 [Malus domestica]

1.3e-36

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

TrEMBL top hits

e value

%identity

Alignment

A0A0V0GQG1 Putative ovule protein (Fragment)

4.6e-37

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL---VTSIALRRGARLRLDCL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL     S  L     ++++CL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL---VTSIALRRGARLRLDCL

A0A1U7XSD1 60S ribosomal protein L37a

6.1e-37

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

A0A1U8LTA9 60S ribosomal protein L37a

6.1e-37

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

A0A6J1ICH2 60S ribosomal protein L37a

6.1e-37

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

K4CND1 Uncharacterized protein

6.1e-37

100

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

SwissProt top hits

e value

%identity

Alignment

P0DKK1 60S ribosomal protein L37a-1

8.1e-39

97.5

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

P0DKK2 60S ribosomal protein L37a-2

8.1e-39

97.5

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

Q8RXU5 60S ribosomal protein L37a-2

4.0e-38

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        K GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

Q9XHE4 60S ribosomal protein L37a

1.4e-38

98.75

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

Q9ZRS8 60S ribosomal protein L37a

5.3e-38

96.25

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

Arabidopsis top hits

e value

%identity

Alignment

AT2G17800.1 Arabidopsis RAC-like 1

2.9e-07

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Query:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN
        CLLISYT+NTF TDYVPTV  NFSA+V+VN
Subjt:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN

AT2G17800.2 Arabidopsis RAC-like 1

2.9e-07

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Query:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN
        CLLISYT+NTF TDYVPTV  NFSA+V+VN
Subjt:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN

AT3G10950.1 Zinc-binding ribosomal protein family protein

2.4e-38

93.75

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        KA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

AT3G51300.1 RHO-related protein from plants 1

2.9e-07

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Query:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN
        CLLISYT+NTF TDYVPTV  NFSA+V+VN
Subjt:  CLLISYTNNTFSTDYVPTVLGNFSADVLVN

AT3G60245.1 Zinc-binding ribosomal protein family protein

2.9e-39

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Query:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL
        K GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRL
Subjt:  KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL

Sequences

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CDS sequence

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ATGAAGGCTGGCATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTG
TGGAAAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTGCAAGTGCCGTGACCG
TTCGGAGCACGATCCGAAGGTTGGTGACCTCCATTGCACTTAGGAGGGGTGCCCGCCTAAGGCTGGATTGTTTGAGATTTGCTTCGGCGCCGCCGCCACTTCTCCGGTTA
GTGCAACGACGGCGGCTACGAAGTCTATTAAATGCGCGACTGTTGAAGATGCCTTGCCTTCTCATTTCTTACACCAATAACACATTTTCGACGGATTATGTTCCGACTGT
TCTTGGCAATTTCAGCGCCGATGTTTTGGTTAATCGGCAGTTCTTAATCAGAGCTTCAAGGACACTGCTGGGGAAGGTTATTCTTGAAGCTCCTACTCGTCCCCCACCTG
CGCCTACTCTTGTTCCTCAATGTTCTTTGCATTGTGTGATAGTGTTCTGA

mRNA sequence

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GGTTTCCCCGCTTGGCCGTTCAGTCTCTGCTCCAGCGTCTCTGCACCAGCGTCTCTCCAGAGGTATCCTTGTTGCTCGAAGGTTTCAACAATGAAGGCTGGCATTGTCGG
CAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGTGGAAAGTATGCCGTGAAGA
GGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTGCAAGTGCCGTGACCGTTCGGAGCACGATCCGAAGG
TTGGTGACCTCCATTGCACTTAGGAGGGGTGCCCGCCTAAGGCTGGATTGTTTGAGATTTGCTTCGGCGCCGCCGCCACTTCTCCGGTTAGTGCAACGACGGCGGCTACG
AAGTCTATTAAATGCGCGACTGTTGAAGATGCCTTGCCTTCTCATTTCTTACACCAATAACACATTTTCGACGGATTATGTTCCGACTGTTCTTGGCAATTTCAGCGCCG
ATGTTTTGGTTAATCGGCAGTTCTTAATCAGAGCTTCAAGGACACTGCTGGGGAAGGTTATTCTTGAAGCTCCTACTCGTCCCCCACCTGCGCCTACTCTTGTTCCTCAA
TGTTCTTTGCATTGTGTGATAGTGTTCTGATTGGCAGTCCTATCCTGTTGCTTGGGATGGCCGATCTGATAGACGGCGAACAATTCCTCTTGGACTATCCTGGGGTCGGA
TCAACACTTGGAGCTATTTCATTTTCATTTTAATCCCAATTTTTGGTTCTGTTACCCATCAATTAAAACTGCTAGAATATATTGCATTCTCTGTGTTATTCACAATATTC
CGTTTCTCAAAGTTTTTATGGAAAGTAAGTTTTGTTGTCGAGGATTATTGAGAGGAATAGTTCTAGATTGGCTAATTAAGAGGAAGATTATGAGTTTATAAGTAAGGAAC
ACTATCTCCATTGGTATTAGGTCATTTGGAGAAACCAAAAGTAAAACCACGAGAACTTATGCTCAAAGTAGACAATATTATACCCTTGTGGAGAGTCGTGGTTTCTAACA
TAGTATCAAAGTCATGTCCTTAACTTAGTCATGCTAATCAAATCCTTAAGTGTCGAACAAAAATGTTGTGAGTCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAAC
AAAAATGTTGTGAGTTTCAAAGGTGTAGTCAAAAGTGACTCAAGTGTCAAACAAAACAAAAGGTGTATTTTGTTCAAGTGCTCTAGAGAAGGAGTCGAGCCTTGATTAAG
GAGAGGTTGTTCGAGCTCCAGGTGTACTTTGTTCAAGGGAAGGGATTGTTGAGGATTATTGAGAGTAGTCTCACATTGGCTAATTAAGAGGAAAGATCATACTCTAGTAG
ATATTGTTCTCTTTGAGCTTTCACTTTCATGCTTCCTCTCAAGGTCTTAAAACACGTCTATTAGGAAGAGGTTTCCATACCCCTATAAGGAATGCTTTGTTCTCCTCTCC
AACCCATGTGGAATCTCACAATCCACCCCTCTTGGGGGCCCAACGTTCTCGCTGGCACACTGCTCGGTGTCTAGCTCTGATACGATTTGTAACAGTCCAAGCTCACCGCT
AGTAAATATTGTCCTCTTTGAACTTTCTCTTTCGGGCTTCCCCTTACAATATTAAAACACGTATGTTAGGAAGAGGTTTTCACACCCTGATAAAAAATACTTTGTTCTCC
TCTCCAACTGATGTAGGGATCTCACAAGTATAAAGTCAAACAAATAGATGGTCATTTTGGTTTAGAATAACCGGTTGGTTTCTCGATCAATGTAGGAGATAGAAGTAAGA
TTTAAGCTATAGATTTTTTAATACCATATTCCAAGAACACCATAATATGCTTGTTTTTGTGGACCTATTACTTTTATTGTACATGACTGACTGCATGGATTAGCTCAATG
TACATGCATTAAGTGAATTTGAAGGCTCTTGTGGTCTTCGGTTCTCATGGCTGCCTTTGATGCTGCAATTAAGATGGTTCCTCAACCTCCATAATCAAGAAGCCAAAGAG
AAAACATTCCATCTGCAATGCTCTTCGATCAAGTTACTCACCGATCCCGTTTATGTGGATTACTTATATCACTCGGTGTATTTTAACGATTGTCTTATTGTATCTATTGC
TGATCATTGATTTCTCTTGTCGTCGAGTCTCGAACATAAGGAGAATCCTTCCTACATTTTGAGAAGTTCTTTGAGGAGACTATCATCACGAGACTAGTGTTTGTGCAAGT
ACTTGAATTTGTATCTCATGGTTGTTATGGGCATGTGAATCGTTTAATCTACATCCAACGGTTATTAAAGAGTTGTCAC

Protein sequence

Show/hide protein sequence

MKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLVTSIALRRGARLRLDCLRFASAPPPLLRL
VQRRRLRSLLNARLLKMPCLLISYTNNTFSTDYVPTVLGNFSADVLVNRQFLIRASRTLLGKVILEAPTRPPPAPTLVPQCSLHCVIVF

CmoCh06G012290 (gene) of Cucurbita moschata (Rifu) v1 genome