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CmoCh06G012340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G012340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 24
Genome locationCmo_Chr06:9334796..9335182
RNA-Seq ExpressionCmoCh06G012340
SyntenyCmoCh06G012340
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582492.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5486.18Show/hide
Query:  TLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGP
        TLFFL SI LLPL FLQT F  CDA+LDLRSLKG++ID++ KGVCNQKIGECLTEPEMESE+SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGP
Subjt:  TLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGP

Query:  ANSYDRGCEVITRCARDVHDVKT
        ANSYDRGCEVITRCARDVHD+ T
Subjt:  ANSYDRGCEVITRCARDVHDVKT

KAG7028741.1 Protein RALF-like 31, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-6397.62Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKPTTLFFLLSIL LPLTFLQTLFPLCDAVLDLRS KGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDV
        CHPGPANSYDRGCEVITRCARDVHD+
Subjt:  CHPGPANSYDRGCEVITRCARDVHDV

XP_022946007.1 protein RALF-like 24 [Cucurbita moschata]3.7e-66100Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHDVKT
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

XP_022974738.1 protein RALF-like 24 [Cucurbita maxima]3.4e-5992.97Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKP TLFFLLSI LLPL FLQT FP CDAVLDLRSLKGNQIDL+PKGVCNQKIGECLTEP+MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

XP_023539976.1 protein RALF-like 31 [Cucurbita pepo subsp. pepo]1.2e-6496.88Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKPTTLFFLLSILLLPLTFLQTLFP CDAVLDLRSLKGNQIDL+PKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

TrEMBL top hitse value%identityAlignment
A0A0A0L7V8 Uncharacterized protein8.6e-5380.47Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAK   LFFL SI + PL FLQT F  CDA+LDLRS KG++++++ KGVCNQKIGECLT+PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

A0A1S3AWQ1 protein RALF-like 24 isoform X13.0e-5379.69Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAK   LFF L  ++ PL FLQT F  CDA+LDLRS KG+++D++ KGVCNQKIGECLT+PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

A0A5D3CZU4 Protein RALF-like 24 isoform X13.0e-5379.69Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAK   LFF L  ++ PL FLQT F  CDA+LDLRS KG+++D++ KGVCNQKIGECLT+PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

A0A6J1G2H2 protein RALF-like 241.8e-66100Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHDVKT
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

A0A6J1IH73 protein RALF-like 241.6e-5992.97Show/hide
Query:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
        MAKP TLFFLLSI LLPL FLQT FP CDAVLDLRSLKGNQIDL+PKGVCNQKIGECLTEP+MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE
Subjt:  MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYE

Query:  CHPGPANSYDRGCEVITRCARDVHDVKT
        CHPGPANSYDRGCEVITRCARDVHD+ T
Subjt:  CHPGPANSYDRGCEVITRCARDVHDVKT

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 314.8e-2467.95Show/hide
Query:  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDVKT
        N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD +D+ T
Subjt:  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDVKT

Q8L9P8 Protein RALF-like 331.2e-1453.49Show/hide
Query:  DLIP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        D +P +  CN  I EC       E EM+SEI+RR+L   K YISY  LRR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  DLIP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

Q945T0 Rapid alkalinization factor6.9e-1553.95Show/hide
Query:  GVCNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        G C   IGEC+ E    E++SE +RR+L   K+YISY  L+++ VPCSR G SYY C PG  AN Y RGC  ITRC
Subjt:  GVCNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

Q9LK37 Protein RALF-like 241.3e-2454.24Show/hide
Query:  LSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD
        L+++ L L  LQT   +    + + S+ G +ID +     N  IGE   E  M SEISRRV+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+
Subjt:  LSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD

Query:  RGCEVITRCARDVHDVKT
        RGC VITRCARD +D+KT
Subjt:  RGCEVITRCARDVHDVKT

Q9MA62 Protein RALF-like 221.4e-1548.39Show/hide
Query:  GNQIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        G+ +D +  G       C   I EC+ E    E +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  GNQIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 15.4e-1554.79Show/hide
Query:  CNQKIGECL--TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        C+  I EC+   E EM+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  AN Y RGC  I RC
Subjt:  CNQKIGECL--TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

AT3G05490.1 ralf-like 229.9e-1748.39Show/hide
Query:  GNQIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        G+ +D +  G       C   I EC+ E    E +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  GNQIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

AT3G23805.1 ralf-like 248.9e-2654.24Show/hide
Query:  LSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD
        L+++ L L  LQT   +    + + S+ G +ID +     N  IGE   E  M SEISRRV+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+
Subjt:  LSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD

Query:  RGCEVITRCARDVHDVKT
        RGC VITRCARD +D+KT
Subjt:  RGCEVITRCARDVHDVKT

AT4G13950.1 ralf-like 313.4e-2567.95Show/hide
Query:  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDVKT
        N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD +D+ T
Subjt:  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDVKT

AT4G15800.1 ralf-like 338.3e-1653.49Show/hide
Query:  DLIP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        D +P +  CN  I EC       E EM+SEI+RR+L   K YISY  LRR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  DLIP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCCACCACTCTGTTCTTCCTTCTTTCCATCCTCCTCCTTCCACTCACTTTCCTTCAAACCCTTTTCCCCTTGTGCGATGCTGTTCTTGATCTCAGATCTTT
GAAGGGCAACCAAATCGATTTAATACCAAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCAGAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGA
TGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGCCATCCTGGTCCGGCGAATTCGTATGAT
CGAGGGTGCGAGGTTATTACTAGATGTGCTAGAGATGTGCACGATGTAAAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACCCACCACTCTGTTCTTCCTTCTTTCCATCCTCCTCCTTCCACTCACTTTCCTTCAAACCCTTTTCCCCTTGTGCGATGCTGTTCTTGATCTCAGATCTTT
GAAGGGCAACCAAATCGATTTAATACCAAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCCTAACAGAGCCAGAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGA
TGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGCCATCCTGGTCCGGCGAATTCGTATGAT
CGAGGGTGCGAGGTTATTACTAGATGTGCTAGAGATGTGCACGATGTAAAGACTTGA
Protein sequenceShow/hide protein sequence
MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD
RGCEVITRCARDVHDVKT