; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G012760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G012760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich cell wall structural protein
Genome locationCmo_Chr06:9629343..9630092
RNA-Seq ExpressionCmoCh06G012760
SyntenyCmoCh06G012760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597313.1 hypothetical protein SDJN03_10493, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6691.09Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGGGGGIGGV           AGHGLGGAGGIGGI GHGLGGGGGIG IPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAG V VG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GS
        GS
Subjt:  GS

KAG7028780.1 hypothetical protein SDJN02_09961, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-7597.56Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPG EKVQFVDAV+VKAAEL AAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV  G
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

XP_022945139.1 glycine-rich protein 5 isoform X1 [Cucurbita moschata]5.5e-80100Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

XP_022945148.1 glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita moschata]7.7e-7495.12Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGG          GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

XP_022974868.1 glycine-rich cell wall structural protein [Cucurbita maxima]1.3e-6589.95Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVA   AARNVPGAE+VQFVDAV+VKAAEL  AGG A RDEK FIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGAGV
        LGGMGGGGGGGGG+GGVAGH   G GGIGGLAGHGLGGAGGIGGI GHG+GG GGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG GGDGGAG 
Subjt:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGAGV

Query:  VPVGGSVRP
        +PVGGSVRP
Subjt:  VPVGGSVRP

TrEMBL top hitse value%identityAlignment
A0A1S3AYL0 uncharacterized PE-PGRS family protein PE_PGRS461.1e-2862.02Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAEL--LAAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD
        MEKLFV+  L  +A   AAR VPG ++ +FV+AV+VKA EL   A  GD  RDEK FIYGGVGGFAGMGGYAGL G PMLGGSAGIGKFGGIGG AGIG 
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAEL--LAAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD

Query:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV
         G  GG+GGG G G         G  GIGGLAGHGLGGAGGIGG+ GHGLGG GGIG   G G+GG GG          NGG GG GG+GGG        
Subjt:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV

Query:  PVGGSVRP
        PV GS+RP
Subjt:  PVGGSVRP

A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS463.7e-2962.5Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAEL--LAAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD
        MEKLFV+  L  +A   AAR VPG ++ +FV+AV+VKAAEL   A  GD  RDEK FIYGGVGGFAGMGGYAGL G PMLGGSAGIGKFGGIGG AGIG 
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAEL--LAAGGDAGRDEKTFIYGGVGGFAGMGGYAGL-GMPMLGGSAGIGKFGGIGGFAGIGD

Query:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV
         G  GG+GGG G G         G  GIGGLAGHGLGGAGGIGG+ GHGLGG GGIG   G G+GG GG          NGG GG GG+GGG        
Subjt:  PGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVV

Query:  PVGGSVRP
        PV GS+RP
Subjt:  PVGGSVRP

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X23.7e-7495.12Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGG          GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

A0A6J1G053 glycine-rich protein 5 isoform X12.7e-80100Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
        LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG
Subjt:  LGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVG

Query:  GSVRP
        GSVRP
Subjt:  GSVRP

A0A6J1IHK9 glycine-rich cell wall structural protein6.4e-6689.95Show/hide
Query:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
        MEKLFVMLFLAVVA   AARNVPGAE+VQFVDAV+VKAAEL  AGG A RDEK FIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG
Subjt:  MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGG

Query:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGAGV
        LGGMGGGGGGGGG+GGVAGH   G GGIGGLAGHGLGGAGGIGGI GHG+GG GGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG GGDGGAG 
Subjt:  LGGMGGGGGGGGGIGGVAGH---GGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGG-GGDGGAGV

Query:  VPVGGSVRP
        +PVGGSVRP
Subjt:  VPVGGSVRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein2.3e-0748.37Show/hide
Query:  VMLFLAVVAAATAARNVPGAE---KVQFVD-----AVQVKAAELLAAGGDAGRDEKTFIYG--GVGGFAGMGGYA---GLGMPMLGGSAGIGKFGGIGGF
        V + LA+      AR VPG     K    D      +  KAA+ L         +K  I G  GVGGFAG+GG A   GLGMP++GG  GIGK+GGIGG 
Subjt:  VMLFLAVVAAATAARNVPGAE---KVQFVD-----AVQVKAAELLAAGGDAGRDEKTFIYG--GVGGFAGMGGYA---GLGMPMLGGSAGIGKFGGIGGF

Query:  AGIGDPGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGH--GLGGAGGVGGSGGGDSGNGGTGGIGGSGGGG
        AGIG    +GG+GG GG GGG+GG+     GG+GG    G+GG GG+GG+ G GLGG GG+GG  G   G+GG GG+GG+GGG  G GG G  GG G GG
Subjt:  AGIGDPGGLGGMGGGGGGGGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGH--GLGGAGGVGGSGGGDSGNGGTGGIGGSGGGG

Query:  DGGAGVVPVGGSVRP
          G G   VGG + P
Subjt:  DGGAGVVPVGGSVRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCTCTTTGTAATGCTCTTCCTGGCTGTTGTTGCGGCGGCTACGGCGGCGCGTAATGTTCCCGGTGCTGAGAAGGTGCAGTTCGTGGACGCCGTTCAAGTCAA
GGCGGCGGAGTTGCTGGCGGCGGGTGGTGATGCTGGTCGTGATGAGAAGACTTTTATCTACGGCGGAGTTGGTGGATTTGCTGGCATGGGCGGGTATGCAGGGTTGGGTA
TGCCGATGCTGGGTGGCTCTGCTGGGATCGGGAAATTTGGTGGAATTGGAGGTTTCGCCGGAATTGGTGACCCGGGTGGCCTCGGCGGTATGGGCGGCGGAGGAGGAGGT
GGTGGTGGAATAGGTGGTGTGGCTGGGCATGGAGGTGGCGGAATAGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGAATAGGTGGTATAGTTGGGCATGGACT
TGGCGGAGGTGGCGGAATTGGTGGTATACCTGGACATGGACTTGGAGGAGCTGGTGGGGTCGGAGGATCCGGCGGCGGTGACAGTGGAAATGGTGGAACTGGCGGGATCG
GAGGATCAGGCGGTGGTGGAGACGGCGGAGCAGGCGTCGTTCCAGTCGGTGGCTCTGTTCGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCTCTTTGTAATGCTCTTCCTGGCTGTTGTTGCGGCGGCTACGGCGGCGCGTAATGTTCCCGGTGCTGAGAAGGTGCAGTTCGTGGACGCCGTTCAAGTCAA
GGCGGCGGAGTTGCTGGCGGCGGGTGGTGATGCTGGTCGTGATGAGAAGACTTTTATCTACGGCGGAGTTGGTGGATTTGCTGGCATGGGCGGGTATGCAGGGTTGGGTA
TGCCGATGCTGGGTGGCTCTGCTGGGATCGGGAAATTTGGTGGAATTGGAGGTTTCGCCGGAATTGGTGACCCGGGTGGCCTCGGCGGTATGGGCGGCGGAGGAGGAGGT
GGTGGTGGAATAGGTGGTGTGGCTGGGCATGGAGGTGGCGGAATAGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGAATAGGTGGTATAGTTGGGCATGGACT
TGGCGGAGGTGGCGGAATTGGTGGTATACCTGGACATGGACTTGGAGGAGCTGGTGGGGTCGGAGGATCCGGCGGCGGTGACAGTGGAAATGGTGGAACTGGCGGGATCG
GAGGATCAGGCGGTGGTGGAGACGGCGGAGCAGGCGTCGTTCCAGTCGGTGGCTCTGTTCGGCCATAA
Protein sequenceShow/hide protein sequence
MEKLFVMLFLAVVAAATAARNVPGAEKVQFVDAVQVKAAELLAAGGDAGRDEKTFIYGGVGGFAGMGGYAGLGMPMLGGSAGIGKFGGIGGFAGIGDPGGLGGMGGGGGG
GGGIGGVAGHGGGGIGGLAGHGLGGAGGIGGIVGHGLGGGGGIGGIPGHGLGGAGGVGGSGGGDSGNGGTGGIGGSGGGGDGGAGVVPVGGSVRP