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CmoCh06G013170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G013170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:9850964..9853173
RNA-Seq ExpressionCmoCh06G013170
SyntenyCmoCh06G013170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDX75673.1 hypothetical protein CR513_44414, partial [Mucuna pruriens]5.8e-0756Show/hide
Query:  SEDLAARVALETMLKSTGPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSS
        S  +A  + L + L   GPP+  T+S+NSS SS  IPLH  L PSLL VPTS APAATKIL   LSP++R SLS+
Subjt:  SEDLAARVALETMLKSTGPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSS

RDX75674.1 hypothetical protein CR513_44415, partial [Mucuna pruriens]5.5e-0565.96Show/hide
Query:  STHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPASYS
        ST+  +   GVLM ADQ  AEPPPTVEPAR+ IFPS L K PP SYS
Subjt:  STHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPASYS

TrEMBL top hitse value%identityAlignment
A0A0A9L352 Uncharacterized protein1.2e-1349.56Show/hide
Query:  GPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSSSLKLYLTLPSDRTTPEPESRTIVMKWAVLEYLSIRFLLSSPD
        GP S  T S+N+S SS   PLH S  PSL  VPTS APAAT++ N    P+   S SS L    T PS  T P P SRT     AV EY  IR  +S PD
Subjt:  GPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSSSLKLYLTLPSDRTTPEPESRTIVMKWAVLEYLSIRFLLSSPD

Query:  IHGNNIANDPGPN
         HG   AN PGP+
Subjt:  IHGNNIANDPGPN

A0A0A9UGF0 Uncharacterized protein3.8e-0451.85Show/hide
Query:  LPKNGILSLSTHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPAS
        LP  G     +HSC T+ GVLMLADQ TAEPPPTV P  + +    + K PP S
Subjt:  LPKNGILSLSTHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPAS

A0A0E0CNK6 Uncharacterized protein4.7e-1047.57Show/hide
Query:  GPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSSSLKLYLTLPSDRTTPEPESRTIVMKWAVLEYLSIRFLLSSPD
        GP +T T S+NSSS+S   P H S CPSL CVPTS APAAT+  +    P    SLS++ + Y T  S  T P+P S T      VL  LSIR   S PD
Subjt:  GPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSSSLKLYLTLPSDRTTPEPESRTIVMKWAVLEYLSIRFLLSSPD

Query:  IHG
          G
Subjt:  IHG

A0A371FBL2 Uncharacterized protein (Fragment)2.6e-0565.96Show/hide
Query:  STHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPASYS
        ST+  +   GVLM ADQ  AEPPPTVEPAR+ IFPS L K PP SYS
Subjt:  STHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPASYS

A0A371FC37 Uncharacterized protein (Fragment)2.8e-0756Show/hide
Query:  SEDLAARVALETMLKSTGPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSS
        S  +A  + L + L   GPP+  T+S+NSS SS  IPLH  L PSLL VPTS APAATKIL   LSP++R SLS+
Subjt:  SEDLAARVALETMLKSTGPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTCTAGTGAAGATTTAGCTGCTCGAGTAGCACTCGAAACTATGCTAAAATCTACCGGCCCTCCTTCTACAGATACCATATCCAAAAACTCTTCCAGTTCCTC
CTTCCCAATCCCTTTACATTCAAGTCTTTGTCCATCACTCCTATGTGTGCCAACTTCAGTAGCTCCAGCAGCTACCAAAATCCTCAATGACTGTCTCAGCCCTGTCTTGA
GGTTTTCCTTGTCTTCTTCACTCAAGTTATACCTCACCCTTCCCTCCGATCGCACAACCCCGGAACCTGAATCTCGAACGATTGTTATGAAATGGGCAGTTCTCGAATAC
TTGAGCATTCGTTTCTTATTGTCAAGTCCAGATATCCATGGGAACAATATAGCGAATGATCCTGGTCCTAATAGAGAGCTTCCAAAGAATGGAATCTTGTCGCTTTCAAC
CCATTCCTGCAAAACGGCATTTGGGGTTCTGATGCTTGCTGACCAATTAACGGCGGAGCCACCGCCGACGGTAGAACCAGCCAGAATGAACATTTTCCCATCATTACTAG
TTAAAACCCCACCAGCTTCATACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTCTAGTGAAGATTTAGCTGCTCGAGTAGCACTCGAAACTATGCTAAAATCTACCGGCCCTCCTTCTACAGATACCATATCCAAAAACTCTTCCAGTTCCTC
CTTCCCAATCCCTTTACATTCAAGTCTTTGTCCATCACTCCTATGTGTGCCAACTTCAGTAGCTCCAGCAGCTACCAAAATCCTCAATGACTGTCTCAGCCCTGTCTTGA
GGTTTTCCTTGTCTTCTTCACTCAAGTTATACCTCACCCTTCCCTCCGATCGCACAACCCCGGAACCTGAATCTCGAACGATTGTTATGAAATGGGCAGTTCTCGAATAC
TTGAGCATTCGTTTCTTATTGTCAAGTCCAGATATCCATGGGAACAATATAGCGAATGATCCTGGTCCTAATAGAGAGCTTCCAAAGAATGGAATCTTGTCGCTTTCAAC
CCATTCCTGCAAAACGGCATTTGGGGTTCTGATGCTTGCTGACCAATTAACGGCGGAGCCACCGCCGACGGTAGAACCAGCCAGAATGAACATTTTCCCATCATTACTAG
TTAAAACCCCACCAGCTTCATACAGTTGA
Protein sequenceShow/hide protein sequence
MLVSSEDLAARVALETMLKSTGPPSTDTISKNSSSSSFPIPLHSSLCPSLLCVPTSVAPAATKILNDCLSPVLRFSLSSSLKLYLTLPSDRTTPEPESRTIVMKWAVLEY
LSIRFLLSSPDIHGNNIANDPGPNRELPKNGILSLSTHSCKTAFGVLMLADQLTAEPPPTVEPARMNIFPSLLVKTPPASYS