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CmoCh06G013230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G013230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L14-2-like
Genome locationCmo_Chr06:9878155..9879380
RNA-Seq ExpressionCmoCh06G013230
SyntenyCmoCh06G013230
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0007018 - microtubule-based movement (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003774 - motor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018796.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-5691.47Show/hide
Query:  MVSIPPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVK
        +  I PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVK
Subjt:  MVSIPPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVK

Query:  KRRASLNDFDRFKLMLAKIKVSDVVMQSV
        KRRASLNDFDRFKLMLAKIK + +V Q +
Subjt:  KRRASLNDFDRFKLMLAKIKVSDVVMQSV

XP_022924785.1 60S ribosomal protein L14-2-like [Cucurbita moschata]2.6e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

XP_022924787.1 60S ribosomal protein L14-1-like [Cucurbita moschata]7.5e-5593.55Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK   +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

XP_022947422.1 60S ribosomal protein L14-2-like [Cucurbita moschata]2.6e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

XP_038881110.1 60S ribosomal protein L14-2-like [Benincasa hispida]5.7e-5593.55Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLV+KRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

TrEMBL top hitse value%identityAlignment
A0A6J1EG14 60S ribosomal protein L14-2-like1.2e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

A0A6J1G6E8 60S ribosomal protein L14-2-like1.2e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

A0A6J1IGF2 60S ribosomal protein L14-2-like1.2e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

A0A6J1IQJ0 60S ribosomal protein L14-1-like3.6e-5593.55Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK   +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

A0A6J1IT01 60S ribosomal protein L14-2-like1.2e-5594.35Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFKLMLAKIK + +V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L141.0e-2250.88Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K       +   + +A +  ++ KKWE+S   +K+  K++R 
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAK
        +L DF+RFKLM AK
Subjt:  SLNDFDRFKLMLAK

P55844 Probable 60S ribosomal protein L142.0e-4776.61Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS
        PFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KIDIKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA+
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKVSDVVMQSV
        LNDFDRFK+MLAKIK +  V Q +
Subjt:  LNDFDRFKLMLAKIKVSDVVMQSV

Q7XYA7 60S ribosomal protein L143.0e-2249.18Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRR
        F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT IK+ DI R     E+     AA V + +  S WG+KL  +++R
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRR

Query:  ASLNDFDRFKLMLAKIKVSDVV
        A+L+DF RFK+M+A++K S  +
Subjt:  ASLNDFDRFKLMLAKIKVSDVV

Q9SIM4 60S ribosomal protein L14-13.2e-4879.67Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL
        FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKVSDVVMQSV
        NDFDRFK+MLAKIK + +V Q +
Subjt:  NDFDRFKLMLAKIKVSDVVMQSV

Q9T043 60S ribosomal protein L14-23.7e-4981.3Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL
        FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKVSDVVMQSV
        NDFDRFK+MLAKIK + VV Q +
Subjt:  NDFDRFKLMLAKIKVSDVVMQSV

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L142.2e-4979.67Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL
        FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKVSDVVMQSV
        NDFDRFK+MLAKIK + +V Q +
Subjt:  NDFDRFKLMLAKIKVSDVVMQSV

AT4G27090.1 Ribosomal protein L142.7e-5081.3Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL
        FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKVSDVVMQSV
        NDFDRFK+MLAKIK + VV Q +
Subjt:  NDFDRFKLMLAKIKVSDVVMQSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGCATTCCCCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCA
AAATAGAGCTTTGGTAGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTCTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTAGAAAGAAGG
AACTCATTGAAGCTATGAAGGCTGCTGACGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGAT
AGGTTCAAGCTAATGTTGGCTAAGATAAAGGTCAGTGATGTTGTGATGCAATCTGTAGTTTGTACTTTCTCTTGTTTGTTTTTGACCTTTTTTTATGCATTTGATACATG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGCATTCCCCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCA
AAATAGAGCTTTGGTAGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTCTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTAGAAAGAAGG
AACTCATTGAAGCTATGAAGGCTGCTGACGTTCAGAAGAAGTGGGAGGATAGCTCTTGGGGAAGAAAACTACTCGTGAAGAAAAGAAGGGCATCACTTAATGATTTTGAT
AGGTTCAAGCTAATGTTGGCTAAGATAAAGGTCAGTGATGTTGTGATGCAATCTGTAGTTTGTACTTTCTCTTGTTTGTTTTTGACCTTTTTTTATGCATTTGATACATG
A
Protein sequenceShow/hide protein sequence
MVSIPPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFD
RFKLMLAKIKVSDVVMQSVVCTFSCLFLTFFYAFDT