; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G013470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G013470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionC2H2-type domain-containing protein
Genome locationCmo_Chr06:9988413..9988874
RNA-Seq ExpressionCmoCh06G013470
SyntenyCmoCh06G013470
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597383.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]4.9e-8199.35Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMAAN PIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

KAG7028842.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-8098.69Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMAAN PIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEE+DLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

XP_022949591.1 transcriptional regulator SUPERMAN-like [Cucurbita moschata]9.8e-82100Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

XP_022975340.1 zinc finger protein 11-like [Cucurbita maxima]3.9e-7894.77Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQG WDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RTSSSHSNHQIFPHLS+QPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMA+N PIHQQRSESV+EELLLGANLSLQ+DQNRGVWKNEE+DLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

XP_023539405.1 zinc finger protein 11-like [Cucurbita pepo subsp. pepo]5.4e-8097.39Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLS+QPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMAAN PIHQQRSESVNEEL+LGANLSLQIDQNRGVWKNEE+DLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

TrEMBL top hitse value%identityAlignment
A0A1S3AZA2 zinc finger protein 77.4e-5168.79Show/hide
Query:  MDFGKQGSWDSWSDEYE------HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR-----TSSSHSNHQIF--PHLSSQPTAPL
        MDFGKQGSWDS SDEYE      H KD++ +ND TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK R     +SS+HSNH  F  P + +QPT P 
Subjt:  MDFGKQGSWDSWSDEYE------HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR-----TSSSHSNHQIF--PHLSSQPTAPL

Query:  ------PPSYRMYFDTTAAAMAANSPIHQQ-RSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
              PPSYRMYFDT     A N PIH Q  S +V  + LLGANLSLQIDQNRGVW NEELDLELRLGHEYR
Subjt:  ------PPSYRMYFDTTAAAMAANSPIHQQ-RSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

A0A6J1DD81 zinc finger protein 8-like9.7e-5170.24Show/hide
Query:  MDFGKQGSWDSWSDEY--EHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR----TSSSHSNHQIFPHLSSQPTA---PLPP--
        MDFGKQGSWDS SDEY  + Q  ++  +D TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK+R    +SSSHS+ QIFP +S  P A   P PP  
Subjt:  MDFGKQGSWDSWSDEY--EHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR----TSSSHSNHQIFPHLSSQPTA---PLPP--

Query:  ----SYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
            +YRMYFDTTA   AAN PIH+ RS+  NE+ LLGANL+LQIDQ RGVWKNEELDLELRLGHEYR
Subjt:  ----SYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

A0A6J1E9V2 transcriptional regulator SUPERMAN-like1.1e-4664.37Show/hide
Query:  MDFGKQGSWDSWSDEYE-------HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR------TSSSHSNHQIFPHLSSQPTAPL
        MDFGKQG+ DS SDEY+       H      DND TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK K R      +SS HSN Q+FP LS+QP  P 
Subjt:  MDFGKQGSWDSWSDEYE-------HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR------TSSSHSNHQIFPHLSSQPTAPL

Query:  -------PPSYRMYFDTTAAAMAANSPIHQQ-RSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
               P SYRMYFDT+    A N PIH Q RS  V  + LLGA+LSLQIDQ RGVW+NEE+DLELRLGHEYR
Subjt:  -------PPSYRMYFDTTAAAMAANSPIHQQ-RSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

A0A6J1GCF2 transcriptional regulator SUPERMAN-like4.8e-82100Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

A0A6J1IGJ1 zinc finger protein 11-like1.9e-7894.77Show/hide
Query:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA
        MDFGKQG WDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RTSSSHSNHQIFPHLS+QPTAPLPPSYRMYFDTTAA
Subjt:  MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAA

Query:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR
        AMA+N PIHQQRSESV+EELLLGANLSLQ+DQNRGVWKNEE+DLELRLGHEYR
Subjt:  AMAANSPIHQQRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 105.7e-0840.24Show/hide
Query:  KQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAP
        K+ SW    +E    +D+   +    R Y C+FC+R F +AQALGGHMN+HR+DRA+ K+       +  +FP  SS P  P
Subjt:  KQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAP

Q38895 Transcriptional regulator SUPERMAN2.2e-0739.18Show/hide
Query:  DEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLP-PSYRMYFDTTAAAMAANSPIH
        D  +   D  L      R Y C+FCKR F +AQALGGHMN+HR+DRA+ + + S         P  SS P+ P P P+Y      + + MA + P H
Subjt:  DEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLP-PSYRMYFDTTAAAMAANSPIH

Q9LHS9 Probable transcriptional regulator RABBIT EARS7.5e-0855.32Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K+++ S  S  Q  P
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFP

Q9SLB8 Zinc finger protein 111.1e-0629.7Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAKR-----------------------RTSSSHSNHQIFPHLSSQ--PTAPLPPSYRMYFDTTAAAMAANSP
        Y C+FC+R F +AQALGGHMN+HR+DRAK ++                        +SSS +   + P L++Q   T P P +     D+T +       
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAKR-----------------------RTSSSHSNHQIFPHLSSQ--PTAPLPPSYRMYFDTTAAAMAANSP

Query:  IHQQRS---------------ESVNEELLLGANLSLQIDQNRGVW-------KNEELDLELRLGH
          + +S                SV  E+  G  ++ + DQ  G+         N+ LDLELRLG+
Subjt:  IHQQRS---------------ESVNEELLLGANLSLQIDQNRGVW-------KNEELDLELRLGH

Q9SR34 Transcriptional regulator TAC15.7e-0850.88Show/hide
Query:  DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR
        D  SD       + +D+  +  R Y C+FC RGF+NAQALGGHMNIHR+DRAK +++
Subjt:  DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 104.1e-0940.24Show/hide
Query:  KQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAP
        K+ SW    +E    +D+   +    R Y C+FC+R F +AQALGGHMN+HR+DRA+ K+       +  +FP  SS P  P
Subjt:  KQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAP

AT3G09290.1 telomerase activator14.1e-0950.88Show/hide
Query:  DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR
        D  SD       + +D+  +  R Y C+FC RGF+NAQALGGHMNIHR+DRAK +++
Subjt:  DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-1030.18Show/hide
Query:  HQKDEELDNDS----TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHS--------------------------NHQIFPHLSSQPTAPL
        + +D+++D+ S     +R Y+C  CKRGFTN QALGGH NIHR++R +    +SSSHS                            + + H  SQP  P+
Subjt:  HQKDEELDNDS----TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHS--------------------------NHQIFPHLSSQPTAPL

Query:  PPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGANLSLQIDQNR-------GVWKNEELDLELRLG
         PS+   +  ++++        Q  S  +N  L LG +++   D +R          ++ +LDL+LRLG
Subjt:  PPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGANLSLQIDQNR-------GVWKNEELDLELRLG

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein4.8e-1035.48Show/hide
Query:  STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLG--AN
        S  RPY C FC+RGF+NAQALGGHMNIHRKDRAK ++       +       S             + DT            +++ E    E  LG    
Subjt:  STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLG--AN

Query:  LSLQIDQNRGVWKNEELDLELRLG
         +++I Q       + +DLELRLG
Subjt:  LSLQIDQNRGVWKNEELDLELRLG

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein8.7e-1238.4Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKRRTSSS---HSNHQIFPHLSSQPTAPLPPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGA
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK +  +       H+ F H++S                       +S + +  + +  + L +G 
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKRRTSSS---HSNHQIFPHLSSQPTAPLPPSYRMYFDTTAAAMAANSPIHQQRSESVNEELLLGA

Query:  NLSLQIDQNRGVWKNEELDLELRLG
          S+   +   V +  E+DLELRLG
Subjt:  NLSLQIDQNRGVWKNEELDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGCAAGCAGGGGAGCTGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAAAGGCCTTATGAGTGCACATT
TTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCACATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACGCCGCACCTCTTCCTCCCATTCCAACCACC
AAATTTTCCCTCATCTGTCATCCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGGCGAACTCCCCTATTCACCAA
CAGAGATCGGAGAGTGTGAATGAAGAGCTGCTGTTGGGGGCAAATCTTAGCCTCCAAATTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGCTTGATTTGGAGCTGCG
ATTAGGACATGAATATCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGCAAGCAGGGGAGCTGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAAAGGCCTTATGAGTGCACATT
TTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCACATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACGCCGCACCTCTTCCTCCCATTCCAACCACC
AAATTTTCCCTCATCTGTCATCCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGGCGAACTCCCCTATTCACCAA
CAGAGATCGGAGAGTGTGAATGAAGAGCTGCTGTTGGGGGCAAATCTTAGCCTCCAAATTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGCTTGATTTGGAGCTGCG
ATTAGGACATGAATATCGCTGA
Protein sequenceShow/hide protein sequence
MDFGKQGSWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKRRTSSSHSNHQIFPHLSSQPTAPLPPSYRMYFDTTAAAMAANSPIHQ
QRSESVNEELLLGANLSLQIDQNRGVWKNEELDLELRLGHEYR