; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh06G013530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G013530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationCmo_Chr06:10026390..10026968
RNA-Seq ExpressionCmoCh06G013530
SyntenyCmoCh06G013530
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935087.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita moschata]6.1e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

XP_022935102.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita moschata]6.1e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

XP_022974397.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita maxima]6.1e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

XP_023538723.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita pepo subsp. pepo]6.1e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

XP_023538725.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Cucurbita pepo subsp. pepo]6.1e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

TrEMBL top hitse value%identityAlignment
A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like6.8e-7876.04Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN--KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFR
        MFCEVELVRDV+V  EK  RDG+N QRYI+  LLENLLKE+ASKDHGYF+AVTSLKSIGKG+ KN  +SQ V+FPITF CRTF+P  GEIL GVVRH+FR
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN--KSQYVTFPITFGCRTFVPSGGEILLGVVRHVFR

Query:  RGLLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGL
        RGLLLKCGPI YVFLS+RKMPTYHYVGG+NPVFSS + ATI  +  VRF+VLGVRW+EKRGCIKKEFVMLASLEG+ +LGPIS S++DE  L
Subjt:  RGLLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGL

A0A6J1F4M9 DNA-directed RNA polymerase V subunit 7-like isoform X22.9e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

A0A6J1F9M0 DNA-directed RNA polymerase V subunit 7-like isoform X12.9e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

A0A6J1IA58 DNA-directed RNA polymerase V subunit 7-like isoform X12.9e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

A0A6J1IDV3 DNA-directed RNA polymerase V subunit 7-like isoform X22.9e-105100Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
        LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 78.1e-3641.99Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+G+ +  +  V FP+ F   TF    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS
        + ++CGPI  V+LS  KMP Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS

P38421 DNA-directed RNA polymerase II subunit 77.4e-1329.85Show/hide
Query:  GLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMP-T
        G N +  ++++L+++ ++   S  HG+ +A+T + +IGKG  ++ + +VTFP+ + C  F P  GEIL  VV  V + G   + GP+  +F+S   +P  
Subjt:  GLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMP-T

Query:  YHYVGGKNPVFSSNEFAT-IRTESAVRFNVLGVR
          +  G  P +++++ +  I+ E  VR  ++G R
Subjt:  YHYVGGKNPVFSSNEFAT-IRTESAVRFNVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB71.9e-1332.09Show/hide
Query:  FQRYIMARLLENLLKE---RASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMP-T
        F R +   L+  L+K+     S  HG+ +AVT +++IGKG  ++ + +VTFP+ + C  F P  GEIL  VV  V + G   + GP+  +F+S+  +P  
Subjt:  FQRYIMARLLENLLKE---RASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINYVFLSSRKMP-T

Query:  YHYVGGKNPVFSSNEFAT-IRTESAVRFNVLGVR
          +  G  P +++++ +  I+ +S VR  ++G R
Subjt:  YHYVGGKNPVFSSNEFAT-IRTESAVRFNVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein8.1e-3638.69Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +DE
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE

Q8LE42 DNA-directed RNA polymerase IV subunit 71.0e-3042.46Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  DV + AE  D  GL  QR I+ RLLE   KE+A+KD GY I  T L++IG+G+ K ++  + FP+ F    F    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP
        + LK GP   ++LS  KMP Y ++ G+NP F +   + I+  + VRF VL   W E     +K+F+ LAS++G N LGP
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain7.3e-3242.46Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  DV + AE  D  GL  QR I+ RLLE   KE+A+KD GY I  T L++IG+G+ K ++  + FP+ F    F    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP
        + LK GP   ++LS  KMP Y ++ G+NP F +   + I+  + VRF VL   W E     +K+F+ LAS++G N LGP
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGP

AT4G14520.1 DNA-directed RNA polymerase II-related5.8e-3738.69Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +DE
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE

AT4G14520.2 DNA-directed RNA polymerase II-related5.8e-3738.69Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +DE
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE

AT4G14520.3 DNA-directed RNA polymerase II-related5.8e-3738.69Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV
        MF EVE+ RDV + A+    +G +  + I+ RLL++L+ E+A ++HG+++ +T+LKSIG  +  N       +++ +TFP++F CRTF+P+ G+IL G V
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKN-------KSQYVTFPITFGCRTFVPSGGEILLGVV

Query:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE
        + V   G  ++ GP+ Y +LS  KMP YHYV       + P F  ++ + I     VRF VL VR+ E+    + ++ +LA+LEG+ + GPISL+ +DE
Subjt:  RHVFRRGLLLKCGPINYVFLSSRKMPTYHYVGG-----KNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain5.8e-3741.99Show/hide
Query:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG
        MF +V+L  +V + AE  D  GL  +R I+  LLE    ++A+K+ GY++AVT+L  IG+G+ +  +  V FP+ F   TF    GEI+ GVV  V + G
Subjt:  MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRG

Query:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS
        + ++CGPI  V+LS  KMP Y Y+ G+NP+F + + + I+ E+ VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPINYVFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTT
ATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCA
TTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTAC
GTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTT
CAATGTGCTTGGTGTGAGATGGATAGAAAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGG
AAGCCGATGAGTTAGGCTTGCAAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGAAAGTGGTGGCTGAAAAGGCAGATAGAGATGGTCTCAACTTCCAGAGGTACATTATGGCACGTCTATTAGAGAACTT
ATTGAAGGAGAGGGCCAGCAAAGACCATGGCTATTTTATTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGACAGTGCAAGAATAAATCTCAGTATGTTACATTCCCCA
TTACCTTTGGCTGCCGAACCTTTGTGCCTTCAGGGGGAGAAATCTTGCTTGGAGTTGTTCGTCACGTATTTCGTCGCGGATTGCTCCTAAAATGTGGACCGATCAACTAC
GTGTTTCTTTCATCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTAAGAATCCTGTGTTCTCAAGCAACGAATTCGCCACGATTCGAACCGAGAGCGCTGTACGGTT
CAATGTGCTTGGTGTGAGATGGATAGAAAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAGCAACACACTTGGACCCATTTCATTGTCGG
AAGCCGATGAGTTAGGCTTGCAAACTTAG
Protein sequenceShow/hide protein sequence
MFCEVELVRDVKVVAEKADRDGLNFQRYIMARLLENLLKERASKDHGYFIAVTSLKSIGKGQCKNKSQYVTFPITFGCRTFVPSGGEILLGVVRHVFRRGLLLKCGPINY
VFLSSRKMPTYHYVGGKNPVFSSNEFATIRTESAVRFNVLGVRWIEKRGCIKKEFVMLASLEGSNTLGPISLSEADELGLQT