CuGenDBv2

Gene ID	CmoCh06G013690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	vegetative cell wall protein gp1
Genome location	Cmo_Chr06:10102428..10102982
RNA-Seq Expression	CmoCh06G013690
Synteny	CmoCh06G013690
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-88

98.91

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSF SHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPV+MF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]

7.5e-44

65.78

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP

Query:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSPDIPP
        DF   P P PPGP+ P PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D  P
Subjt:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSPDIPP

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]

6.9e-90

100

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]

3.2e-87

97.28

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSF SHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPP+TPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPD PVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEI TSPSSPDIPPV+MF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

XP_023539404.1 pistil-specific extensin-like protein [Cucurbita pepo subsp. pepo]

5.9e-81

92.93

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTL+RKTLPIYYSSSS S     SF SHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLE+PQIS SP IDPITPPELPP+TPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPV+MF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4M0 Uncharacterized protein

4.9e-41

65.03

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP
        MS TS FSFTLIRKTLP YY  SS+   + P   SH +FLPF    A LS  LL GDSPEFP+  P+P PS PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP

Query:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSP
        +FP    P PPGP+ P PP+PSPPGIDVP+PP KPP+IEPP PGSPVPEP+ILPP PPE  PPRPP      GPEILTS S P
Subjt:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSP

A0A5D3D162 Uncharacterized protein

3.6e-44

65.78

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKN-SAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGP

Query:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSPDIPP
        DF   P P PPGP+ P PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D  P
Subjt:  DFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPP------GPEILTSPSSPDIPP

A0A6J1GD64 vegetative cell wall protein gp1

3.3e-90

100

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

A0A6J1IL49 leucine-rich repeat extensin-like protein 3

1.6e-87

97.28

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Query:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD
        MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSF SHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPP+TPGPD
Subjt:  MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPD

Query:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF
        FPGLPSPLPPGPD PVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEI TSPSSPDIPPV+MF
Subjt:  FPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

A0A6P5SZB6 vegetative cell wall protein gp1

1.6e-12

39.9

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Query:  SCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSP----EFPQKS------PIP----EPSVPLEIPQISTSPEID--
        S  S FS TLIR+T+P   S +S+++     F S       K   PL+  +L    P    ++P +S      P+P    +PS P E+P ISTSP++D  
Subjt:  SCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSP----EFPQKS------PIP----EPSVPLEIPQISTSPEID--

Query:  PITPPEL----PPLTPGPDFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIP
        P+ PPE+    PPL PGP+         PGPD PVPP+  PP           PDI PP P +P+P+PD++PP PP+  PP PPGPEI+  P+ P  P
Subjt:  PITPPEL----PPLTPGPDFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G43770.1 proline-rich family protein

3.9e-06

43.23

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Query:  IYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPDFPGLPSPLPPGPDLPVP
        I +   S S   +PS PS G  L     APL     V + P  P+ SP   P      P+++T P  DP  PP  PP TPGP+FP  PSP PP PD P P
Subjt:  IYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPDFPGLPSPLPPGPDLPVP

Query:  PVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPP--PPPEFPPPRPPGPEIL
        P P  P      P   PP  EPPRP      PDI PP  PPP   PP P GP I+
Subjt:  PVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPP--PPPEFPPPRPPGPEIL

Sequences

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CDS sequence

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ATGTCCTGCACCTCTCCCTTCTCTTTCACTCTCATAAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCCTCTTCCAATCTGGTGATCCCTTCGTTCCCTTCCCATGG
CGAATTCCTCCCCTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCG
AAATTCCTCAAATTTCGACTTCTCCAGAGATTGACCCGATCACTCCGCCAGAGCTTCCGCCGTTAACTCCCGGGCCGGATTTTCCTGGATTGCCGTCTCCCTTGCCTCCC
GGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCC
AGAACCGGACATATTGCCGCCGCCACCACCGGAGTTTCCACCGCCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTATCTATGT
TTTGA

mRNA sequence

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Protein sequence

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MSCTSPFSFTLIRKTLPIYYSSSSSSNLVIPSFPSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPELPPLTPGPDFPGLPSPLPP
GPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVSMF

CmoCh06G013690 (gene) of Cucurbita moschata (Rifu) v1 genome