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CmoCh06G013860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G013860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCmo_Chr06:10176512..10176802
RNA-Seq ExpressionCmoCh06G013860
SyntenyCmoCh06G013860
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597420.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5297.92Show/hide
Query:  MGGSHRHSNHCNFSLLLTLLLAFAAVFFHSAAAETQRWWLGTPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        MGGSHRHSNHCNFSLLLTLLLAFAAVFFH AAAETQRWWLGTPLGPGSSPPTCRS+CGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
Subjt:  MGGSHRHSNHCNFSLLLTLLLAFAAVFFHSAAAETQRWWLGTPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

KGN56945.1 hypothetical protein Csa_009821 [Cucumis sativus]2.2e-2661.46Show/hide
Query:  HSNHCNFSLLLTLLLAF---AAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        H +H +FSLL+  L AF   +A    S+++     W+G   + +GPGSSPPTC +KCGRC PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  HSNHCNFSLLLTLLLAF---AAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

XP_006414653.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Eutrema salsugineum]1.4e-2560.42Show/hide
Query:  LLTLLLAFAAVFFHSAAAETQRWWLGTPL---------------GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        LL+ + AFA +   SA+A +   WLG                  GPGSSPPTCRSKCG+C PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  LLTLLLAFAAVFFHSAAAETQRWWLGTPL---------------GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

XP_008438622.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]1.4e-2556.86Show/hide
Query:  HSNHCNFSLLLTLLLAFAAVFFHSAAAETQR---------WWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLF
        H +H +FSLL+  L AF      S+++ +            W+G   + +GPGSSPPTC +KCGRC PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLF
Subjt:  HSNHCNFSLLLTLLLAFAAVFFHSAAAETQR---------WWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLF

Query:  MP
        MP
Subjt:  MP

XP_038905188.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]3.1e-2561.62Show/hide
Query:  MGGSHRHSNHCNFSLLLTLLLAFAAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        MG    +  H  FSLLL L L  A      +A+     W+G   + +GPGS PPTCR+KCGRC PC+PVHVPIQPG+SVPLEYYPEAWRCKCGNKLFMP
Subjt:  MGGSHRHSNHCNFSLLLTLLLAFAAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

TrEMBL top hitse value%identityAlignment
A0A0A0L4P0 Epidermal patterning factor-like protein1.0e-2661.46Show/hide
Query:  HSNHCNFSLLLTLLLAF---AAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        H +H +FSLL+  L AF   +A    S+++     W+G   + +GPGSSPPTC +KCGRC PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  HSNHCNFSLLLTLLLAF---AAVFFHSAAAETQRWWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

A0A1S3AWH2 Epidermal patterning factor-like protein6.8e-2656.86Show/hide
Query:  HSNHCNFSLLLTLLLAFAAVFFHSAAAETQR---------WWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLF
        H +H +FSLL+  L AF      S+++ +            W+G   + +GPGSSPPTC +KCGRC PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLF
Subjt:  HSNHCNFSLLLTLLLAFAAVFFHSAAAETQR---------WWLG---TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLF

Query:  MP
        MP
Subjt:  MP

A0A2C9W8D5 Epidermal patterning factor-like protein5.7e-2596.15Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        GPGSSPPTCRSKCGRC+PCQPVHVPIQPG+SVPLEYYPEAWRCKCGNKLFMP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

A0A2P5FWC0 Epidermal patterning factor-like protein4.4e-2557.01Show/hide
Query:  HRHSNHCNFSLLLTL----LLAFAAVFFHSAAAETQRWWLGTP-----------LGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKC
        H H N C F  L T+    LL FA+    +    TQ    G+             GPGSSPPTCR KCGRC PC+PVHVPIQPG+S+PLEYYPEAWRCKC
Subjt:  HRHSNHCNFSLLLTL----LLAFAAVFFHSAAAETQRWWLGTP-----------LGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKC

Query:  GNKLFMP
        GNKLFMP
Subjt:  GNKLFMP

V4P8Z8 Epidermal patterning factor-like protein6.8e-2660.42Show/hide
Query:  LLTLLLAFAAVFFHSAAAETQRWWLGTPL---------------GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        LL+ + AFA +   SA+A +   WLG                  GPGSSPPTCRSKCG+C PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  LLTLLLAFAAVFFHSAAAETQRWWLGTPL---------------GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.4e-2076.92Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        G GSSPP C SKCGRC PC+PVHVP+ PG  V  EYYPEAWRCKCGNKL+MP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.0e-2690.38Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        GPGSSPPTCRSKCG+C PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

Q7M1E7 Polygalacturonase2.1e-0841.82Show/hide
Query:  TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        T +   SSPP C++KC  C PC+P  + + P  + P +YYP+ W C C NK++ P
Subjt:  TPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

Q9FY19 Polygalacturonase2.7e-0844.9Show/hide
Query:  SSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        SSPP C++KC  C PC+P  + + P    P +YYP+ W C C NK++ P
Subjt:  SSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.3e-2280.77Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        GPGS PP CR KCG+C PC+ VHVPIQPG+ +PLEYYPEAWRCKCGNKLFMP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein2.2e-0540Show/hide
Query:  GSSPPTCRSKCGRCWPCQPVHVPIQPGM-----SVPLEYYPEAWRCKCGNKLFMP
        GS PP C +KC  C PC P    I+        S P  YYP  W C+C +++F P
Subjt:  GSSPPTCRSKCGRCWPCQPVHVPIQPGM-----SVPLEYYPEAWRCKCGNKLFMP

AT2G30370.1 allergen-related1.0e-2176.92Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        G GSSPP C SKCGRC PC+PVHVP+ PG  V  EYYPEAWRCKCGNKL+MP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

AT2G30370.2 allergen-related1.0e-2176.92Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        G GSSPP C SKCGRC PC+PVHVP+ PG  V  EYYPEAWRCKCGNKL+MP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

AT3G22820.1 allergen-related2.4e-2380.77Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        GPGS PP CR KCG+C PC+ VHVPIQPG+ +PLEYYPEAWRCKCGNKLFMP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)3.5e-2790.38Show/hide
Query:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP
        GPGSSPPTCRSKCG+C PC+PVHVPIQPG+S+PLEYYPEAWRCKCGNKLFMP
Subjt:  GPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGTCACACCGCCACTCCAATCATTGCAACTTCTCCTTACTTCTAACCCTCCTCCTCGCCTTCGCCGCCGTCTTCTTCCACTCCGCCGCTGCGGAAACCCAGCG
GTGGTGGCTTGGGACACCTCTTGGACCGGGTTCGTCGCCGCCAACTTGCCGATCCAAGTGTGGGAGATGCTGGCCGTGTCAACCGGTTCATGTTCCAATTCAACCGGGTA
TGAGTGTGCCATTGGAGTACTACCCCGAAGCTTGGAGATGCAAATGTGGGAATAAGCTCTTCATGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGTCACACCGCCACTCCAATCATTGCAACTTCTCCTTACTTCTAACCCTCCTCCTCGCCTTCGCCGCCGTCTTCTTCCACTCCGCCGCTGCGGAAACCCAGCG
GTGGTGGCTTGGGACACCTCTTGGACCGGGTTCGTCGCCGCCAACTTGCCGATCCAAGTGTGGGAGATGCTGGCCGTGTCAACCGGTTCATGTTCCAATTCAACCGGGTA
TGAGTGTGCCATTGGAGTACTACCCCGAAGCTTGGAGATGCAAATGTGGGAATAAGCTCTTCATGCCTTAG
Protein sequenceShow/hide protein sequence
MGGSHRHSNHCNFSLLLTLLLAFAAVFFHSAAAETQRWWLGTPLGPGSSPPTCRSKCGRCWPCQPVHVPIQPGMSVPLEYYPEAWRCKCGNKLFMP