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CmoCh06G014160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh06G014160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr06:10304488..10305219
RNA-Seq ExpressionCmoCh06G014160
SyntenyCmoCh06G014160
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597448.1 hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia]3.4e-31100Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPYNKTMKLSAS
        MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPYNKTMKLSAS
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPYNKTMKLSAS

KGN56989.1 hypothetical protein Csa_010650 [Cucumis sativus]6.2e-2598.21Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
        MGWLQSLFSPLKKLWFRLHSSP+KRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP

PON80087.1 hypothetical protein PanWU01x14_005370 [Parasponia andersonii]1.7e-2294.55Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWLQSLFSPLKKLWFRLHS+P+KRRGIYILYEDVKSCP EDVHVLWSILVESHT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

POO02187.1 hypothetical protein TorRG33x02_019710 [Trema orientale]1.7e-2294.55Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWLQSLFSPLKKLWFRLHS+P+KRRGIYILYEDVKSCP EDVHVLWSILVESHT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

RXH80416.1 hypothetical protein DVH24_041563 [Malus domestica]1.7e-2290.91Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWL SLFSPLKK+WFRLHS P+KRRGIYILYEDVKSCPCEDVHVLWSILVE+HT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

TrEMBL top hitse value%identityAlignment
A0A0A0L7K5 Uncharacterized protein3.0e-2598.21Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
        MGWLQSLFSPLKKLWFRLHSSP+KRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP

A0A2P5E3G9 Uncharacterized protein8.2e-2394.55Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWLQSLFSPLKKLWFRLHS+P+KRRGIYILYEDVKSCP EDVHVLWSILVESHT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

A0A2P5FWQ0 Uncharacterized protein8.2e-2394.55Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWLQSLFSPLKKLWFRLHS+P+KRRGIYILYEDVKSCP EDVHVLWSILVESHT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

A0A498IAF8 Uncharacterized protein8.2e-2390.91Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT
        MGWL SLFSPLKK+WFRLHS P+KRRGIYILYEDVKSCPCEDVHVLWSILVE+HT
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHT

M5XVP0 Uncharacterized protein1.1e-2291.07Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
        MGWL SLFSPLKKLWFRLHS+P+KRRGIYILYEDVKSCP EDVHVLWSILVE+HTP
Subjt:  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCCCCCGAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTAAAATC
CTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATCTTAGTGGAATCACACACTCCATACAACAAAACAATGAAACTTTCAGCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
AATCCCTCTTCTCTAAGCTAAGCTAAAAAAAATGCACAAAATCATACCTTTCCTCTTTCTTTCTATTCCCTGAGGCATTTTCCCAAATGGGGTGGCTCCAATCCCTCTTC
TCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCCCCCGAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTAAAATCCTGTCCCTGTGAAGATGTGCATGT
GCTTTGGTCAATCTTAGTGGAATCACACACTCCATACAACAAAACAATGAAACTTTCAGCCTCCTAAGCACACCTTCCCCACCAATGTACATAAAATATTTAAAAAAAAC
CTCAAAAATAAAAGTTTTCCTTCATCAATTTTCATCTTTTTTTGTTCTAAATTTTTGTGTAGCTGCTTACAGTTGCTTTGTCTATTTCAGCAGTTAAGGTGGCAGTTGAA
TTCTAAATATTATATGTTTAAGGTTTGATTCTGATAATGACATGAGACAACTATTGAATAGATGGGATAACCTAAAGATGTTCTTGGCTTAGATTGCCTGAAATAATACC
AATGCCATGAATTGAATACTTGTTTGATTATATTTAATCTTTTCTTCATAAGTTCTGTAGAATATTG
Protein sequenceShow/hide protein sequence
MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPYNKTMKLSAS