CuGenDBv2

Gene ID	CmoCh06G014380
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	EF-hand calcium-binding domain-containing protein 4A
Genome location	Cmo_Chr06:10414501..10414929
RNA-Seq Expression	CmoCh06G014380
Synteny	CmoCh06G014380
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438723.1 PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]

8.8e-77

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

XP_011650993.1 uncharacterized protein LOC105434839 [Cucumis sativus]

5.7e-76

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKK R  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

XP_022936946.1 uncharacterized protein LOC111443378 [Cucurbita moschata]

4.2e-79

100

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

XP_022973671.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111472255 [Cucurbita maxima]

4.7e-78

98.59

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDH QASGFGTRIWNLSDRPVELQIRVG ILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

XP_023522910.1 uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo]

5.5e-79

99.3

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRP+ELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8V0 Uncharacterized protein

2.8e-76

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKK R  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

A0A1S3AWR3 uncharacterized protein LOC103483746

4.3e-77

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

A0A5A7U2C9 Uncharacterized protein

4.3e-77

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

A0A6J1F8W2 uncharacterized protein LOC111443378

2.0e-79

100

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

A0A6J1I9A2 LOW QUALITY PROTEIN: uncharacterized protein LOC111472255

2.3e-78

98.59

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Query:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDH QASGFGTRIWNLSDRPVELQIRVG ILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06145.1 unknown protein

2.4e-40

57.04

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Query:  LGSCFDGCRDH-----AQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRM
        L  C+ GC D         +   TR WNLSDRPVELQIRVGSILK+VH+LKPG SK+L+ +SI++AY+  +  +  L YYD+ C PYVW+HE+G D  +M
Subjt:  LGSCFDGCRDH-----AQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRM

Query:  VKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR
        VKQQ++SLEDLR++SEIR+F+D QRGCV+V K+ R
Subjt:  VKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR

Sequences

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CDS sequence

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ATGCCGGGGTTCGGTGTTTTCCCTCTTGGTAGCTGTTTCGATGGGTGCCGAGACCACGCTCAAGCGTCGGGATTCGGCACGCGTATATGGAACTTGAGCGACAGGCCGGT
CGAGCTGCAGATAAGGGTAGGATCAATATTGAAAAAGGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTTACAAAGCATATATGCCAGGAA
GGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAATTTATCAGT
CTTGAAGATTTGAGGGAGTTTTCTGAGATTAGAATCTTTCGGGATCATCAGCGCGGTTGCGTATCGGTTCGGAAGAAACCGAGGCTCGGTTTCTGCTGA

mRNA sequence

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Protein sequence

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MPGFGVFPLGSCFDGCRDHAQASGFGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHESGGDSMRMVKQQFIS
LEDLREFSEIRIFRDHQRGCVSVRKKPRLGFC

CmoCh06G014380 (gene) of Cucurbita moschata (Rifu) v1 genome